version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 154 61.67 0 169411..171030 - 539 86607657 - CYB_0155 - sodium/hydrogen exchanger/universal stress family protein 155 57.32 0 171358..171999 - 213 86607658 - CYB_0156 - hypothetical protein 156 61.06 0 172007..172630 - 207 86607659 hisIE CYB_0157 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 157 58.33 0 172724..172831 - 35 86607660 - CYB_0158 - hypothetical protein 158 54.29 -1 172909..173700 + 263 86607661 phnC-1 CYB_0159 - phosphonate ABC transporter, ATP-binding protein 159 53.96 -1 173747..174643 + 298 86607662 phnD-1 CYB_0160 - phosphonate ABC tranporter, periplasmic phosphonate-binding protein 160 56.04 0 174612..175430 + 272 86607663 phnE-1 CYB_0161 - phosphonate ABC transporter, permease protein 161 62.14 0 175440..175859 + 139 86607664 - CYB_0162 - putative phosphonate metabolism protein PhnG 162 62.28 0 175868..176437 + 189 86607665 phnH CYB_0163 - phosphonate metabolism protein PhnH 163 62.49 0 176422..177474 + 350 86607666 phnI CYB_0164 - phosphonate metabolism protein PhnI 164 61.71 0 177458..178324 + 288 86607667 phnJ CYB_0165 - phosphonate metabolism protein PhnJ 165 59.51 0 178317..179084 + 255 86607668 phnK CYB_0166 - phosphonate C-P lyase system protein PhnK 166 58.48 0 179095..179790 + 231 86607669 phnL CYB_0167 - phosphonate C-P lyase system protein PhnL 167 61.75 0 179771..180910 + 379 86607670 - CYB_0168 - putative phosphonate metabolism protein PhnM 168 62.02 0 180951..183122 - 723 86607671 - CYB_0169 - polysaccharide deacetylase family protein 169 58.89 0 183572..183931 - 119 86607672 - CYB_0170 - CpcD/allophycocyanin linker domain-containing protein 170 60.36 0 184303..184857 + 184 86607673 - CYB_0171 - hypothetical protein 171 52.33 -1 184891..186201 - 436 86607674 - CYB_0172 - hypothetical protein 172 58.30 0 186762..187454 - 230 86607675 - CYB_0174 - DNA-binding response regulator 173 57.62 0 187662..188435 + 257 86607676 - CYB_0175 - hypothetical protein 174 61.93 0 188444..189625 - 393 86607677 - CYB_0176 - glycosyl transferase, group 2 175 52.01 -1 189779..190126 + 115 86607678 - CYB_0177 - anti-anti-sigma factor family protein 176 58.30 0 190206..191030 - 274 86607679 - CYB_0178 - TPR domain-containing protein 177 59.01 0 191204..192235 + 343 86607680 - CYB_0179 - iron-sulfur cluster-binding protein 178 60.27 0 192245..194026 - 593 86607681 sir CYB_0180 - sulfite reductase subunit beta 179 55.18 0 194180..196207 - 675 86607682 - CYB_0181 - peroxisomal fatty acyl CoA ABC transporter transmembrane ATP-binding protein 180 61.22 0 196291..197484 - 397 86607683 - CYB_0182 - hypothetical protein 181 56.39 0 197581..198018 - 145 86607684 - CYB_0183 - hypothetical protein 182 55.80 0 198055..198330 - 91 86607685 rpsO CYB_0184 - ribosomal protein S15 183 62.28 0 198423..199106 + 227 86607686 - CYB_0185 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit 184 54.32 -1 199111..199596 - 161 86607687 apcD CYB_0186 - allophycocyanin alpha, B subunit 185 59.97 0 199788..201146 - 452 86607688 pilT-1 CYB_0187 - twitching mobility protein PilT 186 56.96 0 201389..202078 - 229 86607689 folE CYB_0188 - GTP cyclohydrolase I 187 57.79 0 202191..202922 - 243 86607690 - CYB_0189 - short chain dehydrogenase 188 59.48 0 203165..204388 + 407 86607691 - CYB_0190 - iron ABC transporter ATP-binding protein 189 59.38 0 204872..205585 + 237 86607692 - CYB_0191 - NUDIX family hydrolase 190 52.34 -1 206258..206599 + 113 86607693 trx-1 CYB_0192 - thioredoxin 191 54.53 0 206714..207784 + 356 86607694 - CYB_0193 - hypothetical protein 192 62.54 0 207847..208548 + 233 86607695 trpF CYB_0194 - N-(5'-phosphoribosyl)anthranilate isomerase 193 59.89 0 208565..209434 - 289 86607696 - CYB_0195 - hypothetical protein 194 61.33 0 209503..210327 - 274 86607697 - CYB_0196 - RNA pseudouridine synthase family protein 195 44.97 -2 210425..210802 + 125 86607698 - CYB_0197 - ISSoc13, transposase orfA 196 42.89 -2 210760..211167 + 135 86607699 - CYB_0198 - ISSoc13, transposase orfB 197 58.61 0 211182..211715 - 177 86607700 - CYB_0199 - hypothetical protein 198 58.39 0 212012..212446 - 144 86607701 rbfA CYB_0200 - ribosome-binding factor A 199 56.71 0 212623..212853 + 76 86607702 - CYB_0201 - hypothetical protein 200 61.89 0 212976..214439 + 487 86607703 phrB-1 CYB_0202 - deoxyribodipyrimidine photolyase 201 42.89 -2 214454..214861 - 135 86607704 - CYB_0203 - ISSoc13, transposase orfB 202 44.71 -2 214819..215196 - 125 86607705 - CYB_0204 - ISSoc13, transposase orfA 203 63.88 +1 216392..217609 - 405 86607706 moeA CYB_0206 - molybdopterin biosynthesis protein MoeA 204 57.30 0 218005..218367 + 120 86607707 - CYB_0207 - putative monovalent cation/H+ antiporter subunit C 205 61.64 0 218360..219832 + 490 86607708 - CYB_0208 - putative monovalent cation/H+ antiporter subunit D 206 55.30 0 219834..220220 + 128 86607709 - CYB_0209 - hypothetical protein 207 52.78 -1 220217..220468 + 83 86607710 - CYB_0210 - hypothetical protein 208 55.67 0 220488..220769 + 93 86607711 - CYB_0211 - hypothetical protein 209 61.11 0 220779..221300 + 173 86607712 - CYB_0212 - hypothetical protein 210 60.50 0 221297..221977 + 226 86607713 - CYB_0214 - putative monovalent cation/H+ antiporter subunit B 211 60.54 0 222909..226157 + 1082 86607714 carB CYB_0215 - carbamoyl phosphate synthase large subunit 212 60.23 0 226514..227569 + 351 86607715 psbA-1 CYB_0216 - photosystem II protein D1 213 62.83 +1 227576..229426 - 616 86607716 - CYB_0217 - aspartate kinase 214 60.87 0 229471..231006 - 511 86607717 - CYB_0218 - M50B family peptidase 215 58.59 0 231034..231132 - 32 86607718 - CYB_0219 - hypothetical protein 216 52.87 -1 231285..231545 - 86 86607719 - CYB_0220 - hypothetical protein 217 58.17 0 232121..232591 + 156 86607720 - CYB_0221 - hypothetical protein 218 60.19 0 232758..233405 + 215 86607721 - CYB_0223 - aromatic acid decarboxylase 219 64.96 +1 233383..233499 - 38 86607722 - CYB_0222 - hypothetical protein 220 59.87 0 233532..234650 - 372 86607723 - CYB_0224 - alpha/beta fold family hydrolase 221 60.93 0 234765..235391 + 208 86607724 cobH-1 CYB_0225 - precorrin-8X methylmutase 222 58.28 0 235398..236291 + 297 86607725 - CYB_0226 - hypothetical protein 223 63.41 +1 236292..237551 + 419 86607726 cbiE/cbiT CYB_0227 - precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE/T subunits 224 56.22 0 237598..238200 - 200 86607727 - CYB_0228 - hypothetical protein 225 60.83 0 238504..239223 + 239 86607728 sfsA CYB_0229 - sugar fermentation stimulation protein 226 60.56 0 239321..240580 + 419 86607729 - CYB_0230 - hypothetical protein 227 56.23 0 240593..241378 + 261 86607730 xth CYB_0231 - exodeoxyribonuclease III 228 56.87 0 241643..242836 + 397 86607731 - CYB_0233 - ISSoc1, transposase 229 57.36 0 242791..243252 - 153 86607732 - CYB_0232 - sigma factor, putative 230 52.41 -1 243545..244477 + 310 86607733 - CYB_0234 - polyamine/opine/phosphonate ABC transporter permease 231 60.09 0 244559..245227 + 222 86607734 msrA CYB_0235 - methionine-S-sulfoxide reductase 232 60.27 0 245242..246069 - 275 86607735 cysW CYB_0236 - sulfate ABC transporter, permease protein CysW 233 60.02 0 246059..246871 - 270 86607736 cysT CYB_0237 - sulfate ABC transporter, permease protein CysT 234 59.96 0 246878..247921 - 347 86607737 cysA CYB_0238 - sulfate ABC transporter, ATP-binding protein 235 61.29 0 248096..249100 - 334 86607738 sbp CYB_0239 - sulfate ABC transporter, periplasmic sulfate-binding protein 236 62.40 0 249359..252145 - 928 86607739 - CYB_0240 - putative acetyl coenzyme A synthetase 237 57.47 0 252156..254786 - 876 86607740 - CYB_0241 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 238 53.77 -1 254879..255289 - 136 86607741 - CYB_0242 - OsmC family protein 239 51.87 -1 255472..256221 - 249 86607742 pflA CYB_0243 - pyruvate formate-lyase activating enzyme 240 57.42 0 256447..256857 - 136 86607743 - CYB_0244 - pentapeptide repeat-containing protein 241 60.55 0 256939..259245 - 768 86607744 pflB CYB_0245 - formate acetyltransferase 242 58.70 0 259659..260738 + 359 86607745 - CYB_0246 - 4-hydroxyphenylpyruvate dioxygenase, putative 243 62.19 0 260889..262250 - 453 86607746 - CYB_0247 - ISSoc9, transposase 244 63.63 +1 262491..264302 + 603 86607747 - CYB_0248 - peptide/nickel/opine uptake ABC transporter ATP-binding protein 245 60.56 0 264506..265258 + 250 86607748 - CYB_0249 - DNA-binding response regulator RpaA 246 60.95 0 265343..267475 + 710 86607749 - CYB_0250 - amidinotransferase family protein 247 47.92 -2 267462..267557 + 31 86607750 - CYB_0251 - hypothetical protein 248 62.20 0 267544..268326 + 260 86607751 - CYB_0252 - hypothetical protein 249 61.37 0 268365..268817 - 150 86607752 - CYB_0253 - small heat shock protein (HSP20) family protein 250 50.54 -1 268891..268983 + 30 86607753 - CYB_0255 - hypothetical protein 251 48.31 -2 268915..269121 - 68 86607754 - CYB_0254 - hypothetical protein 252 64.15 +1 269105..269263 + 52 86607755 - CYB_0256 - hypothetical protein 253 60.54 0 269266..269412 + 48 86607756 - CYB_0257 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0