version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1952 51.28 -1 2113032..2113148 - 38 86609456 - CYB_2007 - hypothetical protein 1953 60.07 0 2113202..2114005 + 267 86609457 - CYB_2009 - M55 family peptidase 1954 59.53 0 2113998..2115062 - 354 86609458 - CYB_2008 - tRNA 2-selenouridine synthase 1955 54.81 0 2115109..2115243 - 44 86609459 - CYB_2010 - hypothetical protein 1956 51.11 -1 2115282..2116046 - 254 86609460 - CYB_2011 - urea ABC transporter, ATP-binding protein 1957 51.43 -1 2116081..2116848 - 255 86609461 - CYB_2012 - urea ABC transporter, ATP-binding protein 1958 54.26 -1 2117023..2118231 - 402 86609462 - CYB_2013 - urea ABC transporter, permease protein 1959 58.72 0 2118235..2119392 - 385 86609463 - CYB_2014 - urea ABC transporter, permease protein 1960 57.02 0 2119497..2120771 - 424 86609464 - CYB_2015 - urea ABC transporter, periplasmic urea-binding protein 1961 60.86 0 2121155..2123083 + 642 86609465 - CYB_2016 - S9C family peptidase 1962 57.00 0 2123138..2123965 + 275 86609466 - CYB_2017 - hypothetical protein 1963 62.05 0 2124009..2124485 - 158 86609467 ureE CYB_2018 - urease accessory protein 1964 54.57 0 2124482..2124820 - 112 86609468 - CYB_2019 - hypothetical protein 1965 57.19 0 2124863..2125189 + 108 86609469 - CYB_2020 - hypothetical protein 1966 61.19 0 2125297..2125899 + 200 86609470 leuD CYB_2021 - isopropylmalate isomerase small subunit 1967 61.50 0 2126004..2126951 + 315 86609471 - CYB_2023 - hypothetical protein 1968 54.36 -1 2126948..2127142 - 64 86609472 - CYB_2022 - hypothetical protein 1969 60.42 0 2127282..2127521 + 79 86609473 - CYB_2024 - hypothetical protein 1970 57.25 0 2127612..2128025 + 137 86609474 - CYB_2025 - nodulation efficiency family protein 1971 54.10 -1 2128027..2129220 - 397 86609475 - CYB_2026 - ISSoc1, transposase 1972 60.34 0 2130061..2131608 - 515 86609476 - CYB_2028 - hypothetical protein 1973 52.33 -1 2131747..2132025 - 92 86609477 - CYB_2029 - hypothetical protein 1974 60.07 0 2132469..2133317 + 282 86609478 - CYB_2030 - ABC transporter, ATP-binding protein 1975 56.11 0 2133374..2134093 - 239 86609479 - CYB_2031 - DNA-binding response regulator 1976 54.07 -1 2134563..2134943 + 126 86609480 - CYB_2032 - hypothetical protein 1977 64.17 +1 2135170..2135931 + 253 86609481 - CYB_2033 - hypothetical protein 1978 62.01 0 2136179..2136736 + 185 86609482 - CYB_2034 - hypothetical protein 1979 61.25 0 2136745..2137446 + 233 86609483 - CYB_2035 - cobalt transport protein CbiM 1980 65.46 +1 2137433..2138263 + 276 86609484 cbiQ CYB_2036 - cobalt ABC transporter, permease protein CbiQ 1981 60.81 0 2138247..2139731 + 494 86609485 - CYB_2037 - putative tRNA modifying protein 1982 61.65 0 2139782..2140498 + 238 86609486 rpiA CYB_2038 - ribose 5-phosphate isomerase A 1983 61.43 0 2140819..2142156 + 445 86609487 murF CYB_2039 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 1984 54.22 -1 2142259..2142483 + 74 86609488 - CYB_2040 - hypothetical protein 1985 50.15 -2 2142772..2143104 + 110 86609489 - CYB_2041 - fasciclin domain-containing protein 1986 53.50 -1 2143237..2143479 - 80 86609490 - CYB_2042 - hypothetical protein 1987 60.47 0 2143770..2144576 + 268 86609491 cphB CYB_2043 - cyanophycinase 1988 63.27 +1 2144573..2146399 + 608 86609492 menD CYB_2045 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1989 62.63 +1 2146323..2147387 - 354 86609493 miaA CYB_2044 - tRNA delta(2)-isopentenylpyrophosphate transferase 1990 60.20 0 2147548..2148366 + 272 86609494 - CYB_2046 - hypothetical protein 1991 59.49 0 2148516..2149226 - 236 86609495 rpe CYB_2047 - ribulose-phosphate 3-epimerase 1992 57.87 0 2149242..2149673 + 143 86609496 - CYB_2049 - hypothetical protein 1993 60.58 0 2149332..2149643 - 103 86609497 - CYB_2048 - hypothetical protein 1994 57.32 0 2149725..2150195 + 156 86609498 - CYB_2050 - glyoxalase family protein 1995 62.70 +1 2150252..2151814 + 520 86609499 - CYB_2051 - carbohydrate kinase family protein 1996 53.85 -1 2151852..2152631 - 259 86609500 - CYB_2052 - hypothetical protein 1997 50.94 -1 2153282..2153917 - 211 86609501 - CYB_2053 - putative lipoprotein 1998 53.62 -1 2154210..2154347 - 45 86609502 - CYB_2054 - hypothetical protein 1999 58.03 0 2154433..2155266 - 277 86609503 - CYB_2055 - undecaprenol kinase, putative 2000 59.61 0 2155498..2156064 - 188 86609504 - CYB_2056 - hypothetical protein 2001 54.84 0 2156367..2156552 - 61 86609505 - CYB_2057 - hypothetical protein 2002 52.38 -1 2156640..2156744 - 34 86609506 - CYB_2058 - hypothetical protein 2003 57.72 0 2156695..2157387 - 230 86609507 - CYB_2059 - hypothetical protein 2004 55.40 0 2157387..2158043 - 218 86609508 - CYB_2060 - response regulator 2005 59.07 0 2158299..2159417 + 372 86609509 - CYB_2061 - UbiE/COQ5 family methlytransferase 2006 58.81 0 2159578..2160048 + 156 86609510 - CYB_2062 - hypothetical protein 2007 57.68 0 2160122..2160466 + 114 86609511 - CYB_2063 - hypothetical protein 2008 62.14 0 2160617..2162161 + 514 86609512 - CYB_2064 - major facilitator transporter 2009 59.40 0 2162301..2163470 + 389 86609513 - CYB_2065 - glycosyl transferase, group 1 family protein 2010 59.13 0 2163803..2165248 + 481 86609514 - CYB_2066 - GAF/SpoIIE domain-containing protein 2011 44.71 -2 2165301..2165678 + 125 86609515 - CYB_2067 - ISSoc13, transposase orfA 2012 43.14 -2 2165636..2166043 + 135 86609516 - CYB_2068 - ISSoc13, transposase orfB 2013 55.25 0 2166533..2166751 + 72 86609517 - CYB_2069 - hypothetical protein 2014 61.09 0 2166882..2168315 + 477 86609518 argH CYB_2070 - argininosuccinate lyase 2015 56.02 0 2168361..2169515 - 384 86609519 - CYB_2071 - ISSoc1, transposase 2016 62.63 +1 2169715..2170011 + 98 86609520 - CYB_2072 - hypothetical protein 2017 59.51 0 2170173..2170661 + 162 86609521 - CYB_2073 - Mov34/MPN/PAD-1 family protein 2018 57.80 0 2170908..2171189 + 93 86609522 - CYB_2074 - ThiS domain-containing protein 2019 59.40 0 2171192..2172361 + 389 86609523 - CYB_2075 - hypothetical protein 2020 60.93 0 2172472..2173725 + 417 86609524 ribAB CYB_2077 - riboflavin biosynthesis protein RibA 2021 58.62 0 2173714..2174148 - 144 86609525 - CYB_2076 - hypothetical protein 2022 61.69 0 2174263..2175306 - 347 86609526 - CYB_2078 - GntR family transcriptional regulator 2023 58.62 0 2175462..2176580 - 372 86609527 - CYB_2079 - polyamine ABC transporter, ATP-binding protein 2024 43.75 -2 2176757..2176852 + 31 86609528 - CYB_2080 - hypothetical protein 2025 58.29 0 2176931..2177467 + 178 86609529 - CYB_2081 - DoxX family protein 2026 60.87 0 2177548..2179722 - 724 86609530 ppk CYB_2082 - polyphosphate kinase 2027 59.38 0 2179781..2180740 - 319 86609531 - CYB_2083 - hydrophobic amino acid ABC transporter permease 2028 59.77 0 2180740..2181609 - 289 86609532 - CYB_2084 - hydrophobic amino acid ABC transporter permease 2029 44.71 -2 2181775..2182152 + 125 86609533 - CYB_2085 - ISSoc13, transposase orfA 2030 42.89 -2 2182110..2182517 + 135 86609534 - CYB_2086 - ISSoc13, transposase orfB 2031 63.04 +1 2182578..2183543 + 321 86609535 - CYB_2087 - putative lipoprotein 2032 64.50 +1 2183651..2185402 + 583 86609536 - CYB_2088 - sulfatase 2033 57.98 0 2185415..2185909 - 164 86609537 - CYB_2089 - hypothetical protein 2034 64.04 +1 2186454..2187215 + 253 86609538 fabG CYB_2090 - 3-oxoacyl-(acyl-carrier-protein) reductase 2035 64.23 +1 2187221..2188864 - 547 86609539 ggt CYB_2091 - gamma-glutamyltransferase 2036 61.49 0 2188902..2189771 - 289 86609540 - CYB_2092 - HAD family hydrolase 2037 62.54 0 2189704..2190357 - 217 86609541 - CYB_2093 - hypothetical protein 2038 60.83 0 2190370..2190609 - 79 86609542 secG CYB_2094 - preprotein translocase subunit SecG 2039 53.33 -1 2191281..2191415 + 44 86609543 - CYB_2095 - hypothetical protein 2040 55.68 0 2191976..2192503 - 175 86609544 - CYB_2096 - NADPH-dependent FMN reductase 2041 55.63 0 2192898..2193341 + 147 86609545 - CYB_2098 - hypothetical protein 2042 59.25 0 2193347..2194222 - 291 86609546 nusB CYB_2099 - transcription antitermination factor NusB 2043 61.76 0 2194342..2196501 - 719 86609547 - CYB_2100 - UvrD/Rep family helicase 2044 59.12 0 2196513..2197373 - 286 86609548 - CYB_2101 - HAD family hydrolase 2045 60.06 0 2197590..2198528 + 312 86609549 - CYB_2102 - hypothetical protein 2046 60.58 0 2198611..2199366 + 251 86609550 - CYB_2103 - hypothetical protein 2047 61.09 0 2199443..2200213 + 256 86609551 - CYB_2104 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2048 58.33 0 2200213..2200356 + 47 86609552 - CYB_2105 - hypothetical protein 2049 62.55 +1 2200320..2201048 + 242 86609553 - CYB_2106 - HEAT repeat-containing PBS lyase 2050 56.76 0 2201189..2201854 - 221 86609554 chlM CYB_2107 - Mg-protoporphyrin IX methyl transferase 2051 56.83 0 2202025..2202522 + 165 86609555 - CYB_2108 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.