version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1813 59.85 0 1942420..1943460 + 346 86609317 hemE CYB_1861 - uroporphyrinogen decarboxylase 1814 62.40 0 1943851..1944834 + 327 86609318 - CYB_1863 - glycosyl transferase, group 2 family protein 1815 60.77 0 1944789..1945670 - 293 86609319 - CYB_1862 - inositol monophosphatase family protein 1816 60.53 0 1945812..1947782 + 656 86609320 - CYB_1864 - serine/threonine protein kinase 1817 58.14 0 1948151..1949674 - 507 86609321 - CYB_1865 - S10 family peptidase 1818 59.60 0 1949759..1950352 - 197 86609322 - CYB_1866 - hypothetical protein 1819 63.15 +1 1950554..1951576 - 340 86609323 thiL CYB_1867 - thiamine monophosphate kinase 1820 58.37 0 1951691..1952341 - 216 86609324 - CYB_1868 - hypothetical protein 1821 59.72 0 1952458..1952673 + 71 86609325 - CYB_1869 - hypothetical protein 1822 59.06 0 1952698..1953552 - 284 86609326 - CYB_1870 - putative ABC transporter 1823 61.40 0 1953693..1954718 - 341 86609327 - CYB_1871 - drug exporter ABC transporter ATP-binding protein 1824 55.91 0 1954839..1956056 - 405 86609328 - CYB_1872 - ISSoc1, transposase 1825 59.36 0 1956264..1957358 + 364 86609329 - CYB_1873 - hypothetical protein 1826 60.60 0 1957778..1958914 - 378 86609330 cefD CYB_1874 - isopenicillin N-epimerase 1827 52.09 -1 1959185..1960810 - 541 86609331 prfC CYB_1875 - peptide chain release factor 3 1828 60.00 0 1961105..1961839 - 244 86609332 - CYB_1876 - hypothetical protein 1829 59.30 0 1961940..1962740 - 266 86609333 - CYB_1877 - CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 1830 60.84 0 1962899..1964065 - 388 86609334 aspC CYB_1878 - aspartate aminotransferase 1831 59.89 0 1964141..1964701 - 186 86609335 - CYB_1879 - hypothetical protein 1832 59.87 0 1964805..1965716 - 303 86609336 - CYB_1880 - putative permease 1833 58.52 0 1965810..1966484 - 224 86609337 - CYB_1881 - peptide/opine/nickel uptake ABC transporter ATP-binding protein 1834 61.51 0 1966471..1967400 - 309 86609338 - CYB_1882 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 1835 58.72 0 1967405..1968298 - 297 86609339 - CYB_1883 - peptide/opine/nickel ABC transporter permease 1836 56.59 0 1968295..1969296 - 333 86609340 - CYB_1884 - peptide/opine/nickel ABC transporter permease 1837 56.03 0 1969281..1970906 - 541 86609341 - CYB_1885 - peptide/nickel/opine uptake ABC transporter periplasmic substrate-binding protein 1838 58.68 0 1971812..1974076 + 754 86609342 metE CYB_1886 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1839 62.01 0 1974254..1974940 - 228 86609343 ftsE CYB_1887 - cell division ATP-binding protein FtsE 1840 62.53 0 1975134..1975883 - 249 86609344 - CYB_1888 - WecB/TagA/CpsF family glycosyl transferase 1841 60.06 0 1976131..1976796 + 221 86609345 - CYB_1889 - Tat pathway signal sequence domain-containing protein 1842 58.74 0 1976926..1977417 + 163 86609346 - CYB_1890 - plastocyanin/azurin family copper binding protein 1843 59.84 0 1977427..1977939 + 170 86609347 - CYB_1891 - hypothetical protein 1844 62.88 +1 1977945..1978208 - 87 86609348 - CYB_1892 - S4 domain-containing protein 1845 61.40 0 1978196..1979581 - 461 86609349 - CYB_1893 - aldehyde dehydrogenase family protein 1846 61.44 0 1979708..1980988 - 426 86609350 - CYB_1894 - carboxylesterase 1847 61.11 0 1981377..1982510 - 377 86609351 sasA CYB_1895 - adaptive-response sensory kinase 1848 62.69 +1 1982809..1983009 - 66 86609352 - CYB_1896 - hypothetical protein 1849 58.99 0 1983178..1983828 + 216 86609353 - CYB_1898 - ABC transporter, ATP-binding protein 1850 61.83 0 1983819..1984997 - 392 86609354 - CYB_1897 - M23B family peptidase 1851 61.20 0 1985630..1986343 + 237 86609355 eda CYB_1899 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 1852 58.13 0 1986369..1986860 + 163 86609356 - CYB_1900 - hypothetical protein 1853 61.97 0 1986964..1987389 + 141 86609357 dgkA CYB_1901 - diacylglycerol kinase 1854 60.84 0 1987414..1988340 - 308 86609358 thrB CYB_1902 - homoserine kinase 1855 59.63 0 1988656..1989891 + 411 86609359 - CYB_1903 - arsenite-antimonite (ArsAB) efflux family protein 1856 59.26 0 1989976..1990704 + 242 86609360 - CYB_1904 - short chain dehydrogenase/reductase family oxidoreductase 1857 57.29 0 1990709..1990900 + 63 86609361 - CYB_1906 - hypothetical protein 1858 60.85 0 1990897..1991085 - 62 86609362 - CYB_1905 - hypothetical protein 1859 58.94 0 1991354..1991845 - 163 86609363 - CYB_1907 - hypothetical protein 1860 58.31 0 1992540..1993676 + 378 86609364 - CYB_1908 - methylcitrate synthase 1861 57.10 0 1993756..1994811 + 351 86609365 - CYB_1909 - putative permease 1862 48.74 -2 1995167..1995601 + 144 86609366 - CYB_1910 - hypothetical protein 1863 60.38 0 1995760..1997127 - 455 86609367 - CYB_1911 - FAD-binding protein 1864 54.76 0 1997240..1998037 - 265 86609368 pstB-2 CYB_1912 - phosphate ABC transporter, ATP-binding protein 1865 57.49 0 1998108..1999001 - 297 86609369 pstA-2 CYB_1913 - phosphate ABC transporter, permease protein PtsA 1866 56.20 0 1999040..2000023 - 327 86609370 pstC-2 CYB_1914 - phosphate ABC transporter, permease protein PstC 1867 57.16 0 2000172..2001233 - 353 86609371 pstS-2 CYB_1915 - phosphate ABC transporter, phosphate-binding protein 1868 48.65 -2 2001342..2001452 + 36 86609372 - CYB_1916 - hypothetical protein 1869 60.75 0 2001751..2002731 - 326 86609373 pyrB CYB_1917 - aspartate carbamoyltransferase catalytic subunit 1870 61.65 0 2002741..2004036 - 431 86609374 purB CYB_1918 - adenylosuccinate lyase 1871 51.37 -1 2004170..2004751 + 193 86609375 - CYB_1919 - hypothetical protein 1872 59.20 0 2005223..2005771 + 182 86609376 - CYB_1920 - TPR domain-containing protein 1873 61.34 0 2005832..2006620 - 262 86609377 lipB CYB_1921 - lipoyltransferase 1874 54.21 -1 2006634..2006954 - 106 86609378 trx-3 CYB_1922 - thioredoxin 1875 63.51 +1 2007301..2008440 + 379 86609379 - CYB_1924 - hypothetical protein 1876 61.65 0 2008418..2010232 - 604 86609380 - CYB_1923 - sulfate permease 1877 61.86 0 2010229..2010810 - 193 86609381 - CYB_1925 - rhodanese family protein 1878 55.98 0 2010830..2011297 - 155 86609382 - CYB_1926 - hypothetical protein 1879 59.69 0 2011395..2012111 - 238 86609383 - CYB_1927 - metallo-beta-lactamase domain-containing protein 1880 57.10 0 2012261..2012626 + 121 86609384 - CYB_1928 - ArsR family transcriptional regulator 1881 62.13 0 2012676..2013623 - 315 86609385 - CYB_1929 - NAD-dependent epimerase/dehydratase family protein 1882 61.05 0 2013648..2015054 - 468 86609386 - CYB_1930 - UDP-glucose dehydrogenase 1883 61.37 0 2015190..2016095 + 301 86609387 - CYB_1931 - cation transporter 1884 57.88 0 2018591..2019751 - 386 86609388 - CYB_1932 - Ser/Thr protein phosphatase family protein 1885 60.22 0 2019866..2020501 + 211 86609389 upp-1 CYB_1933 - uracil phosphoribosyltransferase 1886 61.81 0 2020574..2025991 - 1805 86609390 - CYB_1934 - sensor histidine kinase/response regulator 1887 59.89 0 2026183..2028675 - 830 86609391 - CYB_1935 - putative methyl-accepting chemotaxis protein 1888 56.65 0 2028967..2029485 - 172 86609392 - CYB_1936 - CheW domain-containing protein 1889 56.01 0 2029601..2029966 - 121 86609393 - CYB_1937 - response regulator 1890 53.17 -1 2029963..2030340 - 125 86609394 - CYB_1938 - response regulator 1891 57.22 0 2030529..2031671 - 380 86609395 - CYB_1939 - response regulator 1892 61.05 0 2031905..2032189 + 94 86609396 - CYB_1940 - hypothetical protein 1893 61.93 0 2032212..2033330 - 372 86609397 - CYB_1941 - electron transfer flavoprotein, alpha subunit/FixB family protein 1894 60.48 0 2033503..2034327 - 274 86609398 - CYB_1942 - electron transfer flavoprotein, beta subunit/FixA family protein 1895 57.80 0 2034749..2035831 - 360 86609399 - CYB_1943 - Tat pathway signal sequence domain-containing protein 1896 58.15 0 2036152..2037948 + 598 86609400 argS CYB_1944 - arginyl-tRNA synthetase 1897 52.19 -1 2038232..2038597 - 121 86609401 - CYB_1945 - hypothetical protein 1898 61.27 0 2038635..2040356 - 573 86609402 - CYB_1946 - hypothetical protein 1899 52.67 -1 2040760..2041788 + 342 86609403 - CYB_1948 - LysR family transcriptional regulator 1900 61.61 0 2041670..2044123 - 817 86609404 - CYB_1947 - TPR repeat-containing protein 1901 57.73 0 2044260..2045837 + 525 86609405 - CYB_1949 - deoxyribodipyrimidine photolyase family protein 1902 54.70 0 2045913..2046455 + 180 86609406 nrdR CYB_1950 - transcriptional regulator NrdR 1903 60.15 0 2046848..2047522 + 224 86609407 - CYB_1951 - hypothetical protein 1904 52.36 -1 2054276..2054974 + 232 86609408 - CYB_1958 - hypothetical protein 1905 58.65 0 2055175..2055810 - 211 86609409 - CYB_1959 - hypothetical protein 1906 60.36 0 2055814..2056638 - 274 86609410 lgt-2 CYB_1960 - prolipoprotein diacylglyceryl transferase 1907 56.27 0 2056922..2057998 + 358 86609411 recA CYB_1961 - recombinase A 1908 62.98 +1 2058015..2058827 - 270 86609412 - CYB_1962 - RNA methyltransferase 1909 62.30 0 2058908..2060281 - 457 86609413 sun CYB_1963 - ribosomal RNA small subunit methyltransferase B 1910 63.10 +1 2060409..2061194 + 261 86609414 hisA CYB_1964 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1911 59.70 0 2061328..2062518 + 396 86609415 - CYB_1965 - M20D family peptidase 1912 62.11 0 2062532..2063101 - 189 86609416 - CYB_1966 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0