version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1752 62.81 +1 1885610..1886335 - 241 86609256 - CYB_1798 - cobalt ABC transporter ATP-binding protein 1753 61.47 0 1886343..1887170 - 275 86609257 - CYB_1799 - hypothetical protein 1754 55.25 0 1887228..1887446 - 72 86609258 - CYB_1800 - hypothetical protein 1755 55.06 0 1887577..1887981 - 134 86609259 - CYB_1801 - hypothetical protein 1756 55.28 0 1888089..1888211 - 40 86609260 - CYB_1802 - hypothetical protein 1757 54.74 0 1889260..1889670 + 136 86609261 petE CYB_1803 - plastocyanin 1758 56.71 0 1889854..1890084 + 76 86609262 - CYB_1804 - hypothetical protein 1759 51.64 -1 1890121..1890333 - 70 86609263 - CYB_1805 - hypothetical protein 1760 59.71 0 1890422..1891471 + 349 86609264 - CYB_1806 - VIC family potassium channel protein 1761 60.39 0 1891501..1892169 - 222 86609265 - CYB_1807 - phosphotransferase domain-containing protein 1762 59.97 0 1892268..1893431 - 387 86609266 - CYB_1808 - soluble hydrogenase, tritium exchange subunit, putative 1763 58.46 0 1893620..1894801 - 393 86609267 - CYB_1810 - CO2 hydration protein 1764 58.91 0 1894838..1896346 - 502 86609268 - CYB_1811 - NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein 1765 61.69 0 1896359..1898188 - 609 86609269 - CYB_1812 - NAD(P)H-quinone oxidoreductase subunit F 1766 63.63 +1 1898317..1899534 - 405 86609270 - CYB_1813 - hypothetical protein 1767 59.23 0 1899636..1899971 + 111 86609271 - CYB_1814 - hypothetical protein 1768 63.13 +1 1900081..1901127 + 348 86609272 thiE CYB_1815 - thiamine-phosphate pyrophosphorylase 1769 60.64 0 1901329..1902870 + 513 86609273 - CYB_1816 - AAA family ATPase 1770 43.47 -2 1902974..1903831 - 285 86609274 - CYB_1817 - DnaJ domain-containing protein 1771 59.82 0 1904034..1905566 - 510 86609275 - CYB_1818 - leucyl aminopeptidase 1772 61.61 0 1905648..1906973 - 441 86609276 - CYB_1819 - hypothetical protein 1773 61.73 0 1907066..1908685 - 539 86609277 - CYB_1820 - M23B family peptidase 1774 55.96 0 1909095..1910672 + 525 86609278 cysS CYB_1821 - cysteinyl-tRNA synthetase 1775 63.29 +1 1910825..1913488 + 887 86609279 - CYB_1822 - radical SAM domain-containing protein 1776 61.28 0 1914255..1916426 + 723 86609280 - CYB_1823 - ribonuclease 1777 62.77 +1 1916462..1917103 + 213 86609281 rnhB CYB_1824 - ribonuclease HII 1778 55.28 0 1917271..1918464 + 397 86609282 - CYB_1826 - ISSoc1, transposase 1779 56.64 0 1918466..1919422 - 318 86609283 - CYB_1827 - putative sulfite oxidase subunit YedY 1780 59.29 0 1919747..1920166 - 139 86609284 - CYB_1828 - hypothetical protein 1781 58.93 0 1920241..1920576 - 111 86609285 gvpJ CYB_1829 - gas vesicle protein J 1782 59.32 0 1920618..1921502 - 294 86609286 gvpN CYB_1830 - gas vesicle protein GvpN 1783 60.18 0 1921582..1922598 - 338 86609287 gvpC CYB_1831 - gas vesicle structural protein GvpC 1784 58.50 0 1922634..1922780 + 48 86609288 - CYB_1832 - hypothetical protein 1785 56.16 0 1922888..1923106 - 72 86609289 gvpA CYB_1833 - gas vesicle synthesis protein GvpA 1786 58.33 0 1923468..1923731 + 87 86609290 - CYB_1834 - hypothetical protein 1787 54.82 0 1924055..1924738 + 227 86609291 - CYB_1835 - V4R domain-containing protein 1788 53.57 -1 1924735..1924986 + 83 86609292 - CYB_1836 - hypothetical protein 1789 55.71 0 1925044..1925481 + 145 86609293 - CYB_1837 - hypothetical protein 1790 56.91 0 1925751..1926437 + 228 86609294 - CYB_1838 - V4R domain-containing protein 1791 55.73 0 1926541..1926915 + 124 86609295 aroH CYB_1839 - chorismate mutase 1792 58.46 0 1927300..1927701 - 133 86609296 - CYB_1840 - hypothetical protein 1793 61.69 0 1927883..1928686 + 267 86609297 - CYB_1841 - hypothetical protein 1794 57.30 0 1928768..1931704 - 978 86609298 ppc CYB_1842 - phosphoenolpyruvate carboxylase 1795 52.08 -1 1931815..1932006 + 63 86609299 - CYB_1844 - hypothetical protein 1796 56.41 0 1931821..1932054 - 77 86609300 - CYB_1843 - hypothetical protein 1797 56.78 0 1932067..1932339 + 90 86609301 - CYB_1845 - hypothetical protein 1798 54.87 0 1932336..1932530 + 64 86609302 - CYB_1846 - hypothetical protein 1799 63.79 +1 1932557..1933669 + 370 86609303 ribD CYB_1847 - riboflavin biosynthesis protein RibD 1800 59.87 0 1933938..1935041 + 367 86609304 - CYB_1848 - hypothetical protein 1801 55.86 0 1935156..1935377 - 73 86609305 - CYB_1849 - hypothetical protein 1802 59.84 0 1935445..1935825 - 126 86609306 - CYB_1850 - hypothetical protein 1803 53.41 -1 1935908..1936156 + 82 86609307 - CYB_1851 - hypothetical protein 1804 55.96 0 1936472..1937302 - 276 86609308 - CYB_1852 - hypothetical protein 1805 57.97 0 1937296..1937502 + 68 86609309 - CYB_1853 - hypothetical protein 1806 57.86 0 1937614..1938669 + 351 86609310 - CYB_1854 - clavaminate synthase 1807 46.45 -2 1938870..1939052 + 60 86609311 - CYB_1855 - hypothetical protein 1808 54.64 0 1939145..1939984 - 279 86609312 - CYB_1856 - TPR repeat-containing protein 1809 57.72 0 1940030..1940677 - 215 86609313 - CYB_1857 - hypothetical protein 1810 58.01 0 1940691..1941152 - 153 86609314 - CYB_1858 - hypothetical protein 1811 59.73 0 1941223..1942116 - 297 86609315 crtE CYB_1859 - geranylgeranyl diphosphate synthase 1812 50.00 -2 1942190..1942297 - 35 86609316 - CYB_1860 - hypothetical protein 1813 59.85 0 1942420..1943460 + 346 86609317 hemE CYB_1861 - uroporphyrinogen decarboxylase 1814 62.40 0 1943851..1944834 + 327 86609318 - CYB_1863 - glycosyl transferase, group 2 family protein 1815 60.77 0 1944789..1945670 - 293 86609319 - CYB_1862 - inositol monophosphatase family protein 1816 60.53 0 1945812..1947782 + 656 86609320 - CYB_1864 - serine/threonine protein kinase 1817 58.14 0 1948151..1949674 - 507 86609321 - CYB_1865 - S10 family peptidase 1818 59.60 0 1949759..1950352 - 197 86609322 - CYB_1866 - hypothetical protein 1819 63.15 +1 1950554..1951576 - 340 86609323 thiL CYB_1867 - thiamine monophosphate kinase 1820 58.37 0 1951691..1952341 - 216 86609324 - CYB_1868 - hypothetical protein 1821 59.72 0 1952458..1952673 + 71 86609325 - CYB_1869 - hypothetical protein 1822 59.06 0 1952698..1953552 - 284 86609326 - CYB_1870 - putative ABC transporter 1823 61.40 0 1953693..1954718 - 341 86609327 - CYB_1871 - drug exporter ABC transporter ATP-binding protein 1824 55.91 0 1954839..1956056 - 405 86609328 - CYB_1872 - ISSoc1, transposase 1825 59.36 0 1956264..1957358 + 364 86609329 - CYB_1873 - hypothetical protein 1826 60.60 0 1957778..1958914 - 378 86609330 cefD CYB_1874 - isopenicillin N-epimerase 1827 52.09 -1 1959185..1960810 - 541 86609331 prfC CYB_1875 - peptide chain release factor 3 1828 60.00 0 1961105..1961839 - 244 86609332 - CYB_1876 - hypothetical protein 1829 59.30 0 1961940..1962740 - 266 86609333 - CYB_1877 - CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 1830 60.84 0 1962899..1964065 - 388 86609334 aspC CYB_1878 - aspartate aminotransferase 1831 59.89 0 1964141..1964701 - 186 86609335 - CYB_1879 - hypothetical protein 1832 59.87 0 1964805..1965716 - 303 86609336 - CYB_1880 - putative permease 1833 58.52 0 1965810..1966484 - 224 86609337 - CYB_1881 - peptide/opine/nickel uptake ABC transporter ATP-binding protein 1834 61.51 0 1966471..1967400 - 309 86609338 - CYB_1882 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 1835 58.72 0 1967405..1968298 - 297 86609339 - CYB_1883 - peptide/opine/nickel ABC transporter permease 1836 56.59 0 1968295..1969296 - 333 86609340 - CYB_1884 - peptide/opine/nickel ABC transporter permease 1837 56.03 0 1969281..1970906 - 541 86609341 - CYB_1885 - peptide/nickel/opine uptake ABC transporter periplasmic substrate-binding protein 1838 58.68 0 1971812..1974076 + 754 86609342 metE CYB_1886 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1839 62.01 0 1974254..1974940 - 228 86609343 ftsE CYB_1887 - cell division ATP-binding protein FtsE 1840 62.53 0 1975134..1975883 - 249 86609344 - CYB_1888 - WecB/TagA/CpsF family glycosyl transferase 1841 60.06 0 1976131..1976796 + 221 86609345 - CYB_1889 - Tat pathway signal sequence domain-containing protein 1842 58.74 0 1976926..1977417 + 163 86609346 - CYB_1890 - plastocyanin/azurin family copper binding protein 1843 59.84 0 1977427..1977939 + 170 86609347 - CYB_1891 - hypothetical protein 1844 62.88 +1 1977945..1978208 - 87 86609348 - CYB_1892 - S4 domain-containing protein 1845 61.40 0 1978196..1979581 - 461 86609349 - CYB_1893 - aldehyde dehydrogenase family protein 1846 61.44 0 1979708..1980988 - 426 86609350 - CYB_1894 - carboxylesterase 1847 61.11 0 1981377..1982510 - 377 86609351 sasA CYB_1895 - adaptive-response sensory kinase 1848 62.69 +1 1982809..1983009 - 66 86609352 - CYB_1896 - hypothetical protein 1849 58.99 0 1983178..1983828 + 216 86609353 - CYB_1898 - ABC transporter, ATP-binding protein 1850 61.83 0 1983819..1984997 - 392 86609354 - CYB_1897 - M23B family peptidase 1851 61.20 0 1985630..1986343 + 237 86609355 eda CYB_1899 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0