version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1716 61.98 0 1846142..1847293 - 383 86609220 - CYB_1762 - polyamine ABC transporter, periplasmic polyamine-binding protein 1717 59.78 0 1847265..1847729 - 154 86609221 - CYB_1763 - hypothetical protein 1718 61.16 0 1847726..1849105 - 459 86609222 - CYB_1764 - hypothetical protein 1719 56.98 0 1849211..1850191 - 326 86609223 - CYB_1765 - dehydrogenase, E1 component, beta subunit, putative 1720 61.09 0 1850375..1851397 + 340 86609224 pdxA CYB_1766 - 4-hydroxythreonine-4-phosphate dehydrogenase 1721 57.97 0 1851488..1852603 + 371 86609225 - CYB_1767 - aldo/keto reductase family oxidoreductase 1722 61.34 0 1852691..1853497 + 268 86609226 - CYB_1768 - hypothetical protein 1723 55.41 0 1853533..1853763 - 76 86609227 - CYB_1769 - hypothetical protein 1724 45.19 -2 1853741..1853875 + 44 86609228 - CYB_1770 - hypothetical protein 1725 60.15 0 1854118..1855896 + 592 86609229 - CYB_1772 - flavodoxin 1726 49.74 -2 1855874..1856446 - 190 86609230 - CYB_1771 - hypothetical protein 1727 54.73 0 1856514..1860257 - 1247 86609231 - CYB_1773 - sensory box histidine kinase 1728 56.80 0 1860440..1861027 - 195 86609232 - CYB_1774 - hypothetical protein 1729 48.46 -2 1861121..1861735 - 204 86609233 - CYB_1775 - hypothetical protein 1730 58.58 0 1861856..1863166 - 436 86609234 - CYB_1776 - peptidase inhibitor 1731 64.41 +1 1863188..1863364 + 58 86609235 - CYB_1777 - hypothetical protein 1732 59.96 0 1863392..1863958 + 188 86609236 - CYB_1778 - hypothetical protein 1733 61.82 0 1864408..1865727 + 439 86609237 - CYB_1779 - bifunctional sterol desaturase/short chain dehydrogenase 1734 61.83 0 1865923..1866687 + 254 86609238 - CYB_1780 - putative lipoprotein 1735 53.98 -1 1866870..1867760 + 296 86609239 thyX CYB_1781 - thymidylate synthase, flavin-dependent 1736 49.21 -2 1867814..1868575 + 253 86609240 - CYB_1782 - hypothetical protein 1737 59.10 0 1868929..1870488 + 519 86609241 - CYB_1783 - sugar transferase family protein 1738 60.08 0 1870499..1871242 + 247 86609242 purC CYB_1784 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1739 59.13 0 1871515..1872390 + 291 86609243 - CYB_1785 - hypothetical protein 1740 61.20 0 1873483..1874415 - 310 86609244 hemC CYB_1786 - porphobilinogen deaminase 1741 51.30 -1 1874748..1875209 + 153 86609245 - CYB_1787 - hypothetical protein 1742 61.20 0 1875397..1876878 + 493 86609246 - CYB_1788 - glycosyl transferase, group 2 family protein 1743 60.12 0 1876942..1877934 + 330 86609247 ilvC CYB_1789 - ketol-acid reductoisomerase 1744 60.86 0 1877968..1879275 + 435 86609248 serS CYB_1790 - seryl-tRNA synthetase 1745 60.49 0 1879609..1880013 - 134 86609249 - CYB_1791 - hypothetical protein 1746 59.83 0 1880252..1880968 - 238 86609250 - CYB_1792 - microcompartments family protein 1747 62.12 0 1881001..1881660 - 219 86609251 - CYB_1793 - hypothetical protein 1748 62.23 0 1881751..1883712 - 653 86609252 ccmM CYB_1794 - carbon dioxide concentrating mechanism protein CcmM 1749 61.33 0 1883784..1884083 - 99 86609253 ccmL CYB_1795 - carbon dioxide concentrating mechanism protein CcmL 1750 60.53 0 1884083..1884424 - 113 86609254 ccmK-1 CYB_1796 - carbon dioxide concentrating mechanism protein CcmK 1751 61.49 0 1884496..1884804 - 102 86609255 ccmK-2 CYB_1797 - carbon dioxide concentrating mechanism protein CcmK 1752 62.81 +1 1885610..1886335 - 241 86609256 - CYB_1798 - cobalt ABC transporter ATP-binding protein 1753 61.47 0 1886343..1887170 - 275 86609257 - CYB_1799 - hypothetical protein 1754 55.25 0 1887228..1887446 - 72 86609258 - CYB_1800 - hypothetical protein 1755 55.06 0 1887577..1887981 - 134 86609259 - CYB_1801 - hypothetical protein 1756 55.28 0 1888089..1888211 - 40 86609260 - CYB_1802 - hypothetical protein 1757 54.74 0 1889260..1889670 + 136 86609261 petE CYB_1803 - plastocyanin 1758 56.71 0 1889854..1890084 + 76 86609262 - CYB_1804 - hypothetical protein 1759 51.64 -1 1890121..1890333 - 70 86609263 - CYB_1805 - hypothetical protein 1760 59.71 0 1890422..1891471 + 349 86609264 - CYB_1806 - VIC family potassium channel protein 1761 60.39 0 1891501..1892169 - 222 86609265 - CYB_1807 - phosphotransferase domain-containing protein 1762 59.97 0 1892268..1893431 - 387 86609266 - CYB_1808 - soluble hydrogenase, tritium exchange subunit, putative 1763 58.46 0 1893620..1894801 - 393 86609267 - CYB_1810 - CO2 hydration protein 1764 58.91 0 1894838..1896346 - 502 86609268 - CYB_1811 - NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein 1765 61.69 0 1896359..1898188 - 609 86609269 - CYB_1812 - NAD(P)H-quinone oxidoreductase subunit F 1766 63.63 +1 1898317..1899534 - 405 86609270 - CYB_1813 - hypothetical protein 1767 59.23 0 1899636..1899971 + 111 86609271 - CYB_1814 - hypothetical protein 1768 63.13 +1 1900081..1901127 + 348 86609272 thiE CYB_1815 - thiamine-phosphate pyrophosphorylase 1769 60.64 0 1901329..1902870 + 513 86609273 - CYB_1816 - AAA family ATPase 1770 43.47 -2 1902974..1903831 - 285 86609274 - CYB_1817 - DnaJ domain-containing protein 1771 59.82 0 1904034..1905566 - 510 86609275 - CYB_1818 - leucyl aminopeptidase 1772 61.61 0 1905648..1906973 - 441 86609276 - CYB_1819 - hypothetical protein 1773 61.73 0 1907066..1908685 - 539 86609277 - CYB_1820 - M23B family peptidase 1774 55.96 0 1909095..1910672 + 525 86609278 cysS CYB_1821 - cysteinyl-tRNA synthetase 1775 63.29 +1 1910825..1913488 + 887 86609279 - CYB_1822 - radical SAM domain-containing protein 1776 61.28 0 1914255..1916426 + 723 86609280 - CYB_1823 - ribonuclease 1777 62.77 +1 1916462..1917103 + 213 86609281 rnhB CYB_1824 - ribonuclease HII 1778 55.28 0 1917271..1918464 + 397 86609282 - CYB_1826 - ISSoc1, transposase 1779 56.64 0 1918466..1919422 - 318 86609283 - CYB_1827 - putative sulfite oxidase subunit YedY 1780 59.29 0 1919747..1920166 - 139 86609284 - CYB_1828 - hypothetical protein 1781 58.93 0 1920241..1920576 - 111 86609285 gvpJ CYB_1829 - gas vesicle protein J 1782 59.32 0 1920618..1921502 - 294 86609286 gvpN CYB_1830 - gas vesicle protein GvpN 1783 60.18 0 1921582..1922598 - 338 86609287 gvpC CYB_1831 - gas vesicle structural protein GvpC 1784 58.50 0 1922634..1922780 + 48 86609288 - CYB_1832 - hypothetical protein 1785 56.16 0 1922888..1923106 - 72 86609289 gvpA CYB_1833 - gas vesicle synthesis protein GvpA 1786 58.33 0 1923468..1923731 + 87 86609290 - CYB_1834 - hypothetical protein 1787 54.82 0 1924055..1924738 + 227 86609291 - CYB_1835 - V4R domain-containing protein 1788 53.57 -1 1924735..1924986 + 83 86609292 - CYB_1836 - hypothetical protein 1789 55.71 0 1925044..1925481 + 145 86609293 - CYB_1837 - hypothetical protein 1790 56.91 0 1925751..1926437 + 228 86609294 - CYB_1838 - V4R domain-containing protein 1791 55.73 0 1926541..1926915 + 124 86609295 aroH CYB_1839 - chorismate mutase 1792 58.46 0 1927300..1927701 - 133 86609296 - CYB_1840 - hypothetical protein 1793 61.69 0 1927883..1928686 + 267 86609297 - CYB_1841 - hypothetical protein 1794 57.30 0 1928768..1931704 - 978 86609298 ppc CYB_1842 - phosphoenolpyruvate carboxylase 1795 52.08 -1 1931815..1932006 + 63 86609299 - CYB_1844 - hypothetical protein 1796 56.41 0 1931821..1932054 - 77 86609300 - CYB_1843 - hypothetical protein 1797 56.78 0 1932067..1932339 + 90 86609301 - CYB_1845 - hypothetical protein 1798 54.87 0 1932336..1932530 + 64 86609302 - CYB_1846 - hypothetical protein 1799 63.79 +1 1932557..1933669 + 370 86609303 ribD CYB_1847 - riboflavin biosynthesis protein RibD 1800 59.87 0 1933938..1935041 + 367 86609304 - CYB_1848 - hypothetical protein 1801 55.86 0 1935156..1935377 - 73 86609305 - CYB_1849 - hypothetical protein 1802 59.84 0 1935445..1935825 - 126 86609306 - CYB_1850 - hypothetical protein 1803 53.41 -1 1935908..1936156 + 82 86609307 - CYB_1851 - hypothetical protein 1804 55.96 0 1936472..1937302 - 276 86609308 - CYB_1852 - hypothetical protein 1805 57.97 0 1937296..1937502 + 68 86609309 - CYB_1853 - hypothetical protein 1806 57.86 0 1937614..1938669 + 351 86609310 - CYB_1854 - clavaminate synthase 1807 46.45 -2 1938870..1939052 + 60 86609311 - CYB_1855 - hypothetical protein 1808 54.64 0 1939145..1939984 - 279 86609312 - CYB_1856 - TPR repeat-containing protein 1809 57.72 0 1940030..1940677 - 215 86609313 - CYB_1857 - hypothetical protein 1810 58.01 0 1940691..1941152 - 153 86609314 - CYB_1858 - hypothetical protein 1811 59.73 0 1941223..1942116 - 297 86609315 crtE CYB_1859 - geranylgeranyl diphosphate synthase 1812 50.00 -2 1942190..1942297 - 35 86609316 - CYB_1860 - hypothetical protein 1813 59.85 0 1942420..1943460 + 346 86609317 hemE CYB_1861 - uroporphyrinogen decarboxylase 1814 62.40 0 1943851..1944834 + 327 86609318 - CYB_1863 - glycosyl transferase, group 2 family protein 1815 60.77 0 1944789..1945670 - 293 86609319 - CYB_1862 - inositol monophosphatase family protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0