version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1688 58.88 0 1816003..1817544 - 513 86609192 glgA CYB_1734 - glycogen synthase 1689 60.19 0 1817558..1817665 + 35 86609193 - CYB_1735 - hypothetical protein 1690 60.06 0 1817800..1818858 + 352 86609194 psbD-2 CYB_1736 - photosystem II protein D2 1691 61.17 0 1818978..1819541 - 187 86609195 aroK CYB_1737 - shikimate kinase 1692 58.69 0 1819553..1820191 - 212 86609196 ribE CYB_1738 - riboflavin synthase subunit alpha 1693 52.77 -1 1820204..1821901 - 565 86609197 - CYB_1739 - drug resistance ATPase-1 1694 57.81 0 1822506..1823747 - 413 86609198 - CYB_1740 - response regulator 1695 59.18 0 1823994..1824728 - 244 86609199 rph CYB_1741 - ribonuclease PH 1696 55.76 0 1824952..1826106 - 384 86609200 - CYB_1742 - ISSoc8, transposase 1697 62.15 0 1826362..1827114 - 250 86609201 - CYB_1743 - hypothetical protein 1698 63.85 +1 1827309..1828232 + 307 86609202 speB CYB_1744 - agmatinase 1699 59.25 0 1828305..1829153 + 282 86609203 - CYB_1745 - stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein 1700 57.75 0 1829257..1829940 + 227 86609204 - CYB_1746 - hypothetical protein 1701 61.63 0 1830519..1831094 + 191 86609205 - CYB_1747 - hypothetical protein 1702 63.68 +1 1831100..1831903 + 267 86609206 proC CYB_1749 - pyrroline-5-carboxylate reductase 1703 62.89 +1 1831900..1833117 - 405 86609207 - CYB_1748 - pyridine nucleotide-disulfide oxidoreductase 1704 62.77 +1 1833258..1833770 - 170 86609208 - CYB_1750 - hypothetical protein 1705 63.08 +1 1833865..1835145 + 426 86609209 ahcY CYB_1751 - S-adenosyl-L-homocysteine hydrolase 1706 62.59 +1 1835742..1836944 - 400 86609210 argG CYB_1752 - argininosuccinate synthase 1707 58.50 0 1836932..1837078 + 48 86609211 - CYB_1753 - hypothetical protein 1708 63.56 +1 1837181..1839013 + 610 86609212 - CYB_1754 - hypothetical protein 1709 43.63 -2 1839105..1839512 - 135 86609213 - CYB_1755 - ISSoc13, transposase orfB 1710 44.71 -2 1839470..1839847 - 125 86609214 - CYB_1756 - ISSoc13, transposase orfA 1711 60.58 0 1839900..1840901 - 333 86609215 secF CYB_1757 - preprotein translocase subunit SecF 1712 59.91 0 1840898..1842244 - 448 86609216 secD CYB_1758 - preprotein translocase subunit SecD 1713 54.52 0 1842323..1843549 - 408 86609217 - CYB_1759 - ISSoc1, transposase 1714 58.48 0 1843776..1844789 + 337 86609218 - CYB_1760 - hypothetical protein 1715 58.64 0 1844797..1846017 - 406 86609219 chlP CYB_1761 - geranylgeranyl reductase 1716 61.98 0 1846142..1847293 - 383 86609220 - CYB_1762 - polyamine ABC transporter, periplasmic polyamine-binding protein 1717 59.78 0 1847265..1847729 - 154 86609221 - CYB_1763 - hypothetical protein 1718 61.16 0 1847726..1849105 - 459 86609222 - CYB_1764 - hypothetical protein 1719 56.98 0 1849211..1850191 - 326 86609223 - CYB_1765 - dehydrogenase, E1 component, beta subunit, putative 1720 61.09 0 1850375..1851397 + 340 86609224 pdxA CYB_1766 - 4-hydroxythreonine-4-phosphate dehydrogenase 1721 57.97 0 1851488..1852603 + 371 86609225 - CYB_1767 - aldo/keto reductase family oxidoreductase 1722 61.34 0 1852691..1853497 + 268 86609226 - CYB_1768 - hypothetical protein 1723 55.41 0 1853533..1853763 - 76 86609227 - CYB_1769 - hypothetical protein 1724 45.19 -2 1853741..1853875 + 44 86609228 - CYB_1770 - hypothetical protein 1725 60.15 0 1854118..1855896 + 592 86609229 - CYB_1772 - flavodoxin 1726 49.74 -2 1855874..1856446 - 190 86609230 - CYB_1771 - hypothetical protein 1727 54.73 0 1856514..1860257 - 1247 86609231 - CYB_1773 - sensory box histidine kinase 1728 56.80 0 1860440..1861027 - 195 86609232 - CYB_1774 - hypothetical protein 1729 48.46 -2 1861121..1861735 - 204 86609233 - CYB_1775 - hypothetical protein 1730 58.58 0 1861856..1863166 - 436 86609234 - CYB_1776 - peptidase inhibitor 1731 64.41 +1 1863188..1863364 + 58 86609235 - CYB_1777 - hypothetical protein 1732 59.96 0 1863392..1863958 + 188 86609236 - CYB_1778 - hypothetical protein 1733 61.82 0 1864408..1865727 + 439 86609237 - CYB_1779 - bifunctional sterol desaturase/short chain dehydrogenase 1734 61.83 0 1865923..1866687 + 254 86609238 - CYB_1780 - putative lipoprotein 1735 53.98 -1 1866870..1867760 + 296 86609239 thyX CYB_1781 - thymidylate synthase, flavin-dependent 1736 49.21 -2 1867814..1868575 + 253 86609240 - CYB_1782 - hypothetical protein 1737 59.10 0 1868929..1870488 + 519 86609241 - CYB_1783 - sugar transferase family protein 1738 60.08 0 1870499..1871242 + 247 86609242 purC CYB_1784 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1739 59.13 0 1871515..1872390 + 291 86609243 - CYB_1785 - hypothetical protein 1740 61.20 0 1873483..1874415 - 310 86609244 hemC CYB_1786 - porphobilinogen deaminase 1741 51.30 -1 1874748..1875209 + 153 86609245 - CYB_1787 - hypothetical protein 1742 61.20 0 1875397..1876878 + 493 86609246 - CYB_1788 - glycosyl transferase, group 2 family protein 1743 60.12 0 1876942..1877934 + 330 86609247 ilvC CYB_1789 - ketol-acid reductoisomerase 1744 60.86 0 1877968..1879275 + 435 86609248 serS CYB_1790 - seryl-tRNA synthetase 1745 60.49 0 1879609..1880013 - 134 86609249 - CYB_1791 - hypothetical protein 1746 59.83 0 1880252..1880968 - 238 86609250 - CYB_1792 - microcompartments family protein 1747 62.12 0 1881001..1881660 - 219 86609251 - CYB_1793 - hypothetical protein 1748 62.23 0 1881751..1883712 - 653 86609252 ccmM CYB_1794 - carbon dioxide concentrating mechanism protein CcmM 1749 61.33 0 1883784..1884083 - 99 86609253 ccmL CYB_1795 - carbon dioxide concentrating mechanism protein CcmL 1750 60.53 0 1884083..1884424 - 113 86609254 ccmK-1 CYB_1796 - carbon dioxide concentrating mechanism protein CcmK 1751 61.49 0 1884496..1884804 - 102 86609255 ccmK-2 CYB_1797 - carbon dioxide concentrating mechanism protein CcmK 1752 62.81 +1 1885610..1886335 - 241 86609256 - CYB_1798 - cobalt ABC transporter ATP-binding protein 1753 61.47 0 1886343..1887170 - 275 86609257 - CYB_1799 - hypothetical protein 1754 55.25 0 1887228..1887446 - 72 86609258 - CYB_1800 - hypothetical protein 1755 55.06 0 1887577..1887981 - 134 86609259 - CYB_1801 - hypothetical protein 1756 55.28 0 1888089..1888211 - 40 86609260 - CYB_1802 - hypothetical protein 1757 54.74 0 1889260..1889670 + 136 86609261 petE CYB_1803 - plastocyanin 1758 56.71 0 1889854..1890084 + 76 86609262 - CYB_1804 - hypothetical protein 1759 51.64 -1 1890121..1890333 - 70 86609263 - CYB_1805 - hypothetical protein 1760 59.71 0 1890422..1891471 + 349 86609264 - CYB_1806 - VIC family potassium channel protein 1761 60.39 0 1891501..1892169 - 222 86609265 - CYB_1807 - phosphotransferase domain-containing protein 1762 59.97 0 1892268..1893431 - 387 86609266 - CYB_1808 - soluble hydrogenase, tritium exchange subunit, putative 1763 58.46 0 1893620..1894801 - 393 86609267 - CYB_1810 - CO2 hydration protein 1764 58.91 0 1894838..1896346 - 502 86609268 - CYB_1811 - NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein 1765 61.69 0 1896359..1898188 - 609 86609269 - CYB_1812 - NAD(P)H-quinone oxidoreductase subunit F 1766 63.63 +1 1898317..1899534 - 405 86609270 - CYB_1813 - hypothetical protein 1767 59.23 0 1899636..1899971 + 111 86609271 - CYB_1814 - hypothetical protein 1768 63.13 +1 1900081..1901127 + 348 86609272 thiE CYB_1815 - thiamine-phosphate pyrophosphorylase 1769 60.64 0 1901329..1902870 + 513 86609273 - CYB_1816 - AAA family ATPase 1770 43.47 -2 1902974..1903831 - 285 86609274 - CYB_1817 - DnaJ domain-containing protein 1771 59.82 0 1904034..1905566 - 510 86609275 - CYB_1818 - leucyl aminopeptidase 1772 61.61 0 1905648..1906973 - 441 86609276 - CYB_1819 - hypothetical protein 1773 61.73 0 1907066..1908685 - 539 86609277 - CYB_1820 - M23B family peptidase 1774 55.96 0 1909095..1910672 + 525 86609278 cysS CYB_1821 - cysteinyl-tRNA synthetase 1775 63.29 +1 1910825..1913488 + 887 86609279 - CYB_1822 - radical SAM domain-containing protein 1776 61.28 0 1914255..1916426 + 723 86609280 - CYB_1823 - ribonuclease 1777 62.77 +1 1916462..1917103 + 213 86609281 rnhB CYB_1824 - ribonuclease HII 1778 55.28 0 1917271..1918464 + 397 86609282 - CYB_1826 - ISSoc1, transposase 1779 56.64 0 1918466..1919422 - 318 86609283 - CYB_1827 - putative sulfite oxidase subunit YedY 1780 59.29 0 1919747..1920166 - 139 86609284 - CYB_1828 - hypothetical protein 1781 58.93 0 1920241..1920576 - 111 86609285 gvpJ CYB_1829 - gas vesicle protein J 1782 59.32 0 1920618..1921502 - 294 86609286 gvpN CYB_1830 - gas vesicle protein GvpN 1783 60.18 0 1921582..1922598 - 338 86609287 gvpC CYB_1831 - gas vesicle structural protein GvpC 1784 58.50 0 1922634..1922780 + 48 86609288 - CYB_1832 - hypothetical protein 1785 56.16 0 1922888..1923106 - 72 86609289 gvpA CYB_1833 - gas vesicle synthesis protein GvpA 1786 58.33 0 1923468..1923731 + 87 86609290 - CYB_1834 - hypothetical protein 1787 54.82 0 1924055..1924738 + 227 86609291 - CYB_1835 - V4R domain-containing protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0