version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1656 60.93 0 1780406..1784920 - 1504 86609160 - CYB_1700 - hypothetical protein 1657 62.63 +1 1784956..1787850 - 964 86609161 - CYB_1701 - putative helicase 1658 58.33 0 1787993..1788508 + 171 86609162 - CYB_1702 - trunctated cyclic nucleotide-binding protein 1659 51.19 -1 1788505..1788672 + 55 86609163 - CYB_1703 - hypothetical protein 1660 58.63 0 1788665..1789684 + 339 86609164 gap-2 CYB_1704 - glyceraldehyde-3-phosphate dehydrogenase, type I 1661 59.36 0 1789719..1790279 - 186 86609165 - CYB_1705 - 2',5' RNA ligase family protein 1662 56.89 0 1790339..1790788 + 149 86609166 - CYB_1707 - ferredoxin-like protein 1663 63.19 +1 1790757..1791389 - 210 86609167 - CYB_1706 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 1664 59.36 0 1791477..1792229 - 250 86609168 - CYB_1708 - hypothetical protein 1665 55.62 0 1792357..1792881 + 174 86609169 - CYB_1709 - acetyltransferase 1666 64.21 +1 1792911..1794008 + 365 86609170 - CYB_1710 - oxidoreductase, FAD-binding 1667 57.33 0 1794125..1794424 + 99 86609171 - CYB_1711 - hypothetical protein 1668 57.35 0 1794624..1796243 + 539 86609172 groEL CYB_1712 - chaperonin GroEL 1669 57.83 0 1796274..1796669 - 131 86609173 - CYB_1713 - hypothetical protein 1670 56.52 0 1796734..1796871 + 45 86609174 - CYB_1715 - hypothetical protein 1671 61.14 0 1796868..1797500 - 210 86609175 - CYB_1714 - S-layer domain-containing protein 1672 58.82 0 1797699..1798208 + 169 86609176 - CYB_1716 - TPR domain-containing protein 1673 52.31 -1 1798450..1798644 + 64 86609177 - CYB_1718 - hypothetical protein 1674 54.11 -1 1798790..1801870 + 1026 86609178 - CYB_1719 - hypothetical protein 1675 55.88 0 1801933..1802544 + 203 86609179 - CYB_1720 - hypothetical protein 1676 46.40 -2 1802583..1802804 + 73 86609180 - CYB_1721 - hypothetical protein 1677 54.69 0 1803090..1804283 - 397 86609181 - CYB_1722 - ISSoc1, transposase 1678 43.33 -2 1804360..1804599 - 79 86609182 - CYB_1723 - hypothetical protein 1679 51.88 -1 1804652..1807450 + 932 86609183 - CYB_1724 - hypothetical protein 1680 40.44 -2 1807472..1807921 - 149 86609184 - CYB_1725 - hypothetical protein 1681 53.13 -1 1808499..1811210 + 903 86609185 - CYB_1727 - SNF2 family helicase 1682 49.59 -2 1811305..1811919 - 204 86609186 - CYB_1728 - hypothetical protein 1683 47.80 -2 1812114..1812728 - 204 86609187 - CYB_1729 - hypothetical protein 1684 57.91 0 1812917..1813852 + 311 86609188 - CYB_1730 - HEAT repeat-containing PBS lyase 1685 60.14 0 1813907..1814779 + 290 86609189 - CYB_1731 - TPR domain-containing protein 1686 62.50 0 1814789..1815340 + 183 86609190 - CYB_1733 - putative methyltransferase 1687 63.61 +1 1815337..1815957 - 206 86609191 - CYB_1732 - hypothetical protein 1688 58.88 0 1816003..1817544 - 513 86609192 glgA CYB_1734 - glycogen synthase 1689 60.19 0 1817558..1817665 + 35 86609193 - CYB_1735 - hypothetical protein 1690 60.06 0 1817800..1818858 + 352 86609194 psbD-2 CYB_1736 - photosystem II protein D2 1691 61.17 0 1818978..1819541 - 187 86609195 aroK CYB_1737 - shikimate kinase 1692 58.69 0 1819553..1820191 - 212 86609196 ribE CYB_1738 - riboflavin synthase subunit alpha 1693 52.77 -1 1820204..1821901 - 565 86609197 - CYB_1739 - drug resistance ATPase-1 1694 57.81 0 1822506..1823747 - 413 86609198 - CYB_1740 - response regulator 1695 59.18 0 1823994..1824728 - 244 86609199 rph CYB_1741 - ribonuclease PH 1696 55.76 0 1824952..1826106 - 384 86609200 - CYB_1742 - ISSoc8, transposase 1697 62.15 0 1826362..1827114 - 250 86609201 - CYB_1743 - hypothetical protein 1698 63.85 +1 1827309..1828232 + 307 86609202 speB CYB_1744 - agmatinase 1699 59.25 0 1828305..1829153 + 282 86609203 - CYB_1745 - stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein 1700 57.75 0 1829257..1829940 + 227 86609204 - CYB_1746 - hypothetical protein 1701 61.63 0 1830519..1831094 + 191 86609205 - CYB_1747 - hypothetical protein 1702 63.68 +1 1831100..1831903 + 267 86609206 proC CYB_1749 - pyrroline-5-carboxylate reductase 1703 62.89 +1 1831900..1833117 - 405 86609207 - CYB_1748 - pyridine nucleotide-disulfide oxidoreductase 1704 62.77 +1 1833258..1833770 - 170 86609208 - CYB_1750 - hypothetical protein 1705 63.08 +1 1833865..1835145 + 426 86609209 ahcY CYB_1751 - S-adenosyl-L-homocysteine hydrolase 1706 62.59 +1 1835742..1836944 - 400 86609210 argG CYB_1752 - argininosuccinate synthase 1707 58.50 0 1836932..1837078 + 48 86609211 - CYB_1753 - hypothetical protein 1708 63.56 +1 1837181..1839013 + 610 86609212 - CYB_1754 - hypothetical protein 1709 43.63 -2 1839105..1839512 - 135 86609213 - CYB_1755 - ISSoc13, transposase orfB 1710 44.71 -2 1839470..1839847 - 125 86609214 - CYB_1756 - ISSoc13, transposase orfA 1711 60.58 0 1839900..1840901 - 333 86609215 secF CYB_1757 - preprotein translocase subunit SecF 1712 59.91 0 1840898..1842244 - 448 86609216 secD CYB_1758 - preprotein translocase subunit SecD 1713 54.52 0 1842323..1843549 - 408 86609217 - CYB_1759 - ISSoc1, transposase 1714 58.48 0 1843776..1844789 + 337 86609218 - CYB_1760 - hypothetical protein 1715 58.64 0 1844797..1846017 - 406 86609219 chlP CYB_1761 - geranylgeranyl reductase 1716 61.98 0 1846142..1847293 - 383 86609220 - CYB_1762 - polyamine ABC transporter, periplasmic polyamine-binding protein 1717 59.78 0 1847265..1847729 - 154 86609221 - CYB_1763 - hypothetical protein 1718 61.16 0 1847726..1849105 - 459 86609222 - CYB_1764 - hypothetical protein 1719 56.98 0 1849211..1850191 - 326 86609223 - CYB_1765 - dehydrogenase, E1 component, beta subunit, putative 1720 61.09 0 1850375..1851397 + 340 86609224 pdxA CYB_1766 - 4-hydroxythreonine-4-phosphate dehydrogenase 1721 57.97 0 1851488..1852603 + 371 86609225 - CYB_1767 - aldo/keto reductase family oxidoreductase 1722 61.34 0 1852691..1853497 + 268 86609226 - CYB_1768 - hypothetical protein 1723 55.41 0 1853533..1853763 - 76 86609227 - CYB_1769 - hypothetical protein 1724 45.19 -2 1853741..1853875 + 44 86609228 - CYB_1770 - hypothetical protein 1725 60.15 0 1854118..1855896 + 592 86609229 - CYB_1772 - flavodoxin 1726 49.74 -2 1855874..1856446 - 190 86609230 - CYB_1771 - hypothetical protein 1727 54.73 0 1856514..1860257 - 1247 86609231 - CYB_1773 - sensory box histidine kinase 1728 56.80 0 1860440..1861027 - 195 86609232 - CYB_1774 - hypothetical protein 1729 48.46 -2 1861121..1861735 - 204 86609233 - CYB_1775 - hypothetical protein 1730 58.58 0 1861856..1863166 - 436 86609234 - CYB_1776 - peptidase inhibitor 1731 64.41 +1 1863188..1863364 + 58 86609235 - CYB_1777 - hypothetical protein 1732 59.96 0 1863392..1863958 + 188 86609236 - CYB_1778 - hypothetical protein 1733 61.82 0 1864408..1865727 + 439 86609237 - CYB_1779 - bifunctional sterol desaturase/short chain dehydrogenase 1734 61.83 0 1865923..1866687 + 254 86609238 - CYB_1780 - putative lipoprotein 1735 53.98 -1 1866870..1867760 + 296 86609239 thyX CYB_1781 - thymidylate synthase, flavin-dependent 1736 49.21 -2 1867814..1868575 + 253 86609240 - CYB_1782 - hypothetical protein 1737 59.10 0 1868929..1870488 + 519 86609241 - CYB_1783 - sugar transferase family protein 1738 60.08 0 1870499..1871242 + 247 86609242 purC CYB_1784 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1739 59.13 0 1871515..1872390 + 291 86609243 - CYB_1785 - hypothetical protein 1740 61.20 0 1873483..1874415 - 310 86609244 hemC CYB_1786 - porphobilinogen deaminase 1741 51.30 -1 1874748..1875209 + 153 86609245 - CYB_1787 - hypothetical protein 1742 61.20 0 1875397..1876878 + 493 86609246 - CYB_1788 - glycosyl transferase, group 2 family protein 1743 60.12 0 1876942..1877934 + 330 86609247 ilvC CYB_1789 - ketol-acid reductoisomerase 1744 60.86 0 1877968..1879275 + 435 86609248 serS CYB_1790 - seryl-tRNA synthetase 1745 60.49 0 1879609..1880013 - 134 86609249 - CYB_1791 - hypothetical protein 1746 59.83 0 1880252..1880968 - 238 86609250 - CYB_1792 - microcompartments family protein 1747 62.12 0 1881001..1881660 - 219 86609251 - CYB_1793 - hypothetical protein 1748 62.23 0 1881751..1883712 - 653 86609252 ccmM CYB_1794 - carbon dioxide concentrating mechanism protein CcmM 1749 61.33 0 1883784..1884083 - 99 86609253 ccmL CYB_1795 - carbon dioxide concentrating mechanism protein CcmL 1750 60.53 0 1884083..1884424 - 113 86609254 ccmK-1 CYB_1796 - carbon dioxide concentrating mechanism protein CcmK 1751 61.49 0 1884496..1884804 - 102 86609255 ccmK-2 CYB_1797 - carbon dioxide concentrating mechanism protein CcmK 1752 62.81 +1 1885610..1886335 - 241 86609256 - CYB_1798 - cobalt ABC transporter ATP-binding protein 1753 61.47 0 1886343..1887170 - 275 86609257 - CYB_1799 - hypothetical protein 1754 55.25 0 1887228..1887446 - 72 86609258 - CYB_1800 - hypothetical protein 1755 55.06 0 1887577..1887981 - 134 86609259 - CYB_1801 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0