version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1571 61.07 0 1685058..1685897 + 279 86609075 - CYB_1612 - hypothetical protein 1572 56.42 0 1686156..1687736 - 526 86609076 - CYB_1613 - putative S-layer protein 1573 61.99 0 1687951..1688121 - 56 86609077 - CYB_1614 - hypothetical protein 1574 62.80 +1 1688132..1689295 - 387 86609078 - CYB_1616 - inositol-5-monophosphate dehydrogenase 1575 60.81 0 1689397..1690182 - 261 86609079 - CYB_1617 - hypothetical protein 1576 59.33 0 1690530..1692164 - 544 86609080 groEL CYB_1618 - chaperonin GroEL 1577 56.73 0 1692255..1692566 - 103 86609081 groES CYB_1619 - co-chaperonin GroES 1578 62.04 0 1692811..1693674 + 287 86609082 - CYB_1620 - PhzF family phenazine biosynthesis protein 1579 61.59 0 1693688..1694671 - 327 86609083 petA CYB_1621 - apocytochrome f 1580 62.43 0 1694794..1695312 - 172 86609084 petC CYB_1622 - cytochrome b6-f complex iron-sulfur subunit 1581 60.06 0 1695496..1695813 + 105 86609085 - CYB_1623 - hypothetical protein 1582 59.06 0 1695937..1697277 - 446 86609086 - CYB_1624 - hypothetical protein 1583 61.60 0 1697422..1697934 - 170 86609087 - CYB_1625 - hypothetical protein 1584 58.38 0 1697951..1698505 - 184 86609088 - CYB_1626 - hypothetical protein 1585 53.66 -1 1698495..1698617 + 40 86609089 - CYB_1627 - hypothetical protein 1586 62.36 0 1698660..1699937 - 425 86609090 prc-2 CYB_1628 - C-terminal processing peptidase 1587 56.09 0 1700084..1700773 + 229 86609091 petB CYB_1629 - cytochrome b6 1588 54.39 -1 1700872..1701384 + 170 86609092 petD CYB_1630 - cytochrome b6-f complex subunit IV 1589 61.20 0 1701592..1702707 + 371 86609093 leuB CYB_1631 - 3-isopropylmalate dehydrogenase 1590 60.04 0 1702789..1703874 - 361 86609094 - CYB_1632 - dihydrouridine synthase family protein 1591 56.94 0 1703891..1704106 - 71 86609095 rpsR CYB_1633 - 30S ribosomal protein S18 1592 55.38 0 1704136..1704330 - 64 86609096 rpmG CYB_1634 - 50S ribosomal protein L33 1593 59.84 0 1704422..1705183 - 253 86609097 - CYB_1635 - RDD domain-containing protein 1594 63.02 +1 1705315..1706301 - 328 86609098 rnz CYB_1636 - ribonuclease Z 1595 53.01 -1 1706249..1706431 + 60 86609099 - CYB_1637 - hypothetical protein 1596 56.02 0 1706412..1706768 + 118 86609100 - CYB_1638 - iron-sulfur cluster assembly accessory protein 1597 60.23 0 1706804..1708045 - 413 86609101 - CYB_1639 - sensor histidine kinase/response regulator 1598 59.99 0 1708080..1712408 - 1442 86609102 - CYB_1640 - sensory box histidine kinase/response regulator 1599 61.47 0 1712650..1715439 - 929 86609103 - CYB_1641 - calcium-translocating P-type ATPase, PMCA-type 1600 61.74 0 1715961..1717340 + 459 86609104 lysA CYB_1644 - diaminopimelate decarboxylase 1601 58.12 0 1717559..1718482 + 307 86609105 - CYB_1645 - hypothetical protein 1602 60.64 0 1718488..1719234 + 248 86609106 uppS CYB_1646 - undecaprenyl diphosphate synthase 1603 61.67 0 1719273..1719872 - 199 86609107 - CYB_1647 - hypothetical protein 1604 64.91 +1 1719941..1721137 - 398 86609108 - CYB_1648 - aminotransferase, class V 1605 58.20 0 1721267..1722577 - 436 86609109 - CYB_1649 - putative rod shape-determining protein RodA 1606 61.87 0 1722668..1727377 - 1569 86609110 - CYB_1650 - TM2 domain-containing protein 1607 60.10 0 1727509..1729032 - 507 86609111 - CYB_1651 - sugar ABC transporter, ATP-binding protein 1608 58.46 0 1729152..1730150 + 332 86609112 prs CYB_1652 - ribose-phosphate pyrophosphokinase 1609 54.55 0 1730309..1733377 + 1022 86609113 - CYB_1653 - sensory box histidine kinase 1610 57.67 0 1733374..1734384 + 336 86609114 - CYB_1654 - response regulator 1611 61.18 0 1734385..1735551 - 388 86609115 - CYB_1655 - rare lipoprotein A family protein 1612 63.29 +1 1735696..1736760 + 354 86609116 purM CYB_1656 - phosphoribosylformylglycinamidine cyclo-ligase 1613 63.11 +1 1736976..1737986 + 336 86609117 - CYB_1657 - ABC transporter, ATP-binding protein 1614 56.87 0 1737983..1738768 + 261 86609118 - CYB_1658 - hypothetical protein 1615 63.28 +1 1738816..1740378 + 520 86609119 - CYB_1659 - hypothetical protein 1616 61.08 0 1740397..1741881 + 494 86609120 - CYB_1660 - putative lipoprotein 1617 60.65 0 1741886..1742533 - 215 86609121 - CYB_1661 - universal stress protein 1618 62.75 +1 1742629..1743189 - 186 86609122 - CYB_1662 - zinc carboxypeptidase family protein 1619 58.40 0 1743355..1743753 - 132 86609123 - CYB_1663 - single-strand binding family protein 1620 54.98 0 1743827..1744117 - 96 86609124 rpsF CYB_1664 - ribosomal protein S6 1621 54.30 -1 1744312..1744602 + 96 86609125 acpP CYB_1665 - acyl carrier protein 1622 62.69 +1 1744648..1745928 + 426 86609126 fabF CYB_1666 - 3-oxoacyl-(acyl carrier protein) synthase II 1623 56.67 0 1745941..1746210 + 89 86609127 - CYB_1667 - hypothetical protein 1624 61.87 0 1746272..1747084 + 270 86609128 - CYB_1669 - hydrolase, haloacid dehalogenase family protein 1625 62.34 0 1747081..1748259 - 392 86609129 queA CYB_1668 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1626 58.25 0 1748343..1748924 - 193 86609130 dcd CYB_1670 - deoxycytidine triphosphate deaminase 1627 60.61 0 1749048..1749641 - 197 86609131 - CYB_1671 - putative cob(I)alamin adenosyltransferase 1628 43.63 -2 1750146..1750553 - 135 86609132 - CYB_1672 - ISSoc13, transposase orfB 1629 44.97 -2 1750511..1750888 - 125 86609133 - CYB_1673 - ISSoc13, transposase orfA 1630 50.00 -2 1751409..1751534 - 41 86609134 - CYB_1674 - hypothetical protein 1631 60.97 0 1751647..1752858 - 403 86609135 - CYB_1675 - putative lipoprotein 1632 53.12 -1 1752902..1752997 - 31 86609136 - CYB_1676 - hypothetical protein 1633 62.24 0 1753189..1754115 + 308 86609137 - CYB_1677 - D-isomer specific 2-hydroxyacid dehydrogenase 1634 59.85 0 1754173..1755243 - 356 86609138 - CYB_1678 - isopropylmalate/isohomocitrate dehydrogenase family protein 1635 61.31 0 1755423..1756076 - 217 86609139 - CYB_1679 - hypothetical protein 1636 60.35 0 1756309..1757748 - 479 86609140 gltX CYB_1680 - glutamyl-tRNA synthetase 1637 56.14 0 1757869..1757982 - 37 86609141 - CYB_1681 - hypothetical protein 1638 58.12 0 1757983..1758333 + 116 86609142 - CYB_1682 - hypothetical protein 1639 61.95 0 1758620..1759954 - 444 86609143 miaB CYB_1683 - tRNA-i(6)A37 thiotransferase enzyme MiaB 1640 62.07 0 1760072..1760506 + 144 86609144 - CYB_1684 - BlaI/MecI/CopY family transcriptional regulator 1641 63.83 +1 1760503..1761384 + 293 86609145 - CYB_1685 - hypothetical protein 1642 58.89 0 1761444..1762382 + 312 86609146 argB CYB_1687 - acetylglutamate kinase 1643 59.26 0 1762379..1763188 - 269 86609147 - CYB_1686 - hypothetical protein 1644 55.41 0 1763451..1764623 + 390 86609148 - CYB_1688 - ISSoc1, transposase 1645 61.10 0 1764692..1766560 + 622 86609149 - CYB_1689 - ABC transporter, permease/ATP-binding protein 1646 56.70 0 1766988..1767338 + 116 86609150 - CYB_1690 - hypothetical protein 1647 59.06 0 1767537..1769048 + 503 86609151 - CYB_1691 - AAA family ATPase 1648 55.56 0 1769173..1769523 + 116 86609152 - CYB_1692 - hypothetical protein 1649 61.90 0 1769647..1770885 - 412 86609153 pgk CYB_1693 - phosphoglycerate kinase 1650 60.54 0 1771093..1772511 + 472 86609154 pds CYB_1694 - phytoene desaturase 1651 61.55 0 1772668..1773546 + 292 86609155 crtB CYB_1695 - phytoene synthase 1652 59.93 0 1773629..1774444 + 271 86609156 - CYB_1697 - ABC-2 transporter, permease protein 1653 61.73 0 1774441..1779645 - 1734 86609157 - CYB_1696 - DEAD-box ATP dependent DNA helicase 1654 51.52 -1 1779761..1780156 - 131 86609158 - CYB_1698 - PilT domain-containing protein 1655 58.82 0 1780159..1780362 - 67 86609159 - CYB_1699 - hypothetical protein 1656 60.93 0 1780406..1784920 - 1504 86609160 - CYB_1700 - hypothetical protein 1657 62.63 +1 1784956..1787850 - 964 86609161 - CYB_1701 - putative helicase 1658 58.33 0 1787993..1788508 + 171 86609162 - CYB_1702 - trunctated cyclic nucleotide-binding protein 1659 51.19 -1 1788505..1788672 + 55 86609163 - CYB_1703 - hypothetical protein 1660 58.63 0 1788665..1789684 + 339 86609164 gap-2 CYB_1704 - glyceraldehyde-3-phosphate dehydrogenase, type I 1661 59.36 0 1789719..1790279 - 186 86609165 - CYB_1705 - 2',5' RNA ligase family protein 1662 56.89 0 1790339..1790788 + 149 86609166 - CYB_1707 - ferredoxin-like protein 1663 63.19 +1 1790757..1791389 - 210 86609167 - CYB_1706 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 1664 59.36 0 1791477..1792229 - 250 86609168 - CYB_1708 - hypothetical protein 1665 55.62 0 1792357..1792881 + 174 86609169 - CYB_1709 - acetyltransferase 1666 64.21 +1 1792911..1794008 + 365 86609170 - CYB_1710 - oxidoreductase, FAD-binding 1667 57.33 0 1794125..1794424 + 99 86609171 - CYB_1711 - hypothetical protein 1668 57.35 0 1794624..1796243 + 539 86609172 groEL CYB_1712 - chaperonin GroEL 1669 57.83 0 1796274..1796669 - 131 86609173 - CYB_1713 - hypothetical protein 1670 56.52 0 1796734..1796871 + 45 86609174 - CYB_1715 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0