version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 110 61.22 0 125417..126004 + 195 86607613 - CYB_0111 - CAAX amino terminal protease family protein 111 57.71 0 126236..127117 + 293 86607614 - CYB_0112 - phospholipase/carboxylesterase family protein 112 54.84 0 127262..127912 + 216 86607615 - CYB_0113 - anti-oxidant AhpCTSA family protein 113 56.32 0 128097..128666 - 189 86607616 scpB CYB_0114 - segregation and condensation protein B 114 58.69 0 128766..130922 - 718 86607617 - CYB_0115 - NAD(P)H-quinone oxidoreductase subunit F 115 53.99 -1 130928..131140 + 70 86607618 - CYB_0116 - hypothetical protein 116 59.10 0 131259..131615 + 118 86607619 - CYB_0117 - single-strand DNA-binding protein 117 62.70 +1 131641..132396 - 251 86607620 cobK CYB_0118 - cobalt-precorrin-6x reductase 118 56.98 0 132488..133003 + 171 86607621 - CYB_0119 - hypothetical protein 119 61.44 0 133034..133855 + 273 86607622 - CYB_0120 - MOSC domain-containing protein 120 60.16 0 133905..135134 + 409 86607623 ispG CYB_0121 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 121 56.41 0 135204..135632 - 142 86607624 - CYB_0122 - hypothetical protein 122 56.85 0 135720..136391 + 223 86607625 - CYB_0123 - hypothetical protein 123 58.92 0 136597..136893 + 98 86607626 - CYB_0124 - hypothetical protein 124 57.09 0 136913..137173 - 86 86607627 grxC CYB_0125 - glutaredoxin 3 125 53.36 -1 137266..140061 - 931 86607628 polA CYB_0126 - DNA polymerase I 126 60.38 0 140385..141068 + 227 86607629 - CYB_0127 - putative polysaccharide deacetylase 127 59.16 0 141133..141891 + 252 86607630 - CYB_0128 - pspA/IM30 family protein 128 61.14 0 142155..142679 + 174 86607631 psbP CYB_0129 - photosystem II oxygen evolving complex protein PsbP 129 57.11 0 142995..143789 + 264 86607632 icc CYB_0131 - icc protein 130 63.88 +1 143786..144610 - 274 86607633 - CYB_0130 - ABC transporter, permease protein 131 64.19 +1 144607..145536 - 309 86607634 - CYB_0132 - ABC transporter, permease protein 132 60.26 0 145666..146820 + 384 86607635 - CYB_0133 - hypothetical protein 133 61.51 0 147255..148340 - 361 86607636 - CYB_0134 - polysaccharide pyruvyl-transferase 134 56.26 0 148418..149311 - 297 86607637 - CYB_0135 - hypothetical protein 135 54.32 -1 149363..149767 - 134 86607638 psbU CYB_0136 - photosystem II complex extrinsic protein precursor U 136 62.69 +1 149926..152892 + 988 86607639 gcvP CYB_0137 - glycine dehydrogenase 137 60.27 0 152926..153597 + 223 86607640 - CYB_0138 - hypothetical protein 138 60.27 0 153600..154037 + 145 86607641 - CYB_0139 - hypothetical protein 139 58.76 0 154075..154656 + 193 86607642 - CYB_0140 - AhpC/TSA family protein 140 62.98 +1 154702..156357 + 551 86607643 - CYB_0141 - hypothetical protein 141 57.02 0 159250..160389 + 379 86607644 - CYB_0142 - cyclopropane fatty acyl phospholipid synthase 142 56.31 0 160487..160930 + 147 86607645 - CYB_0143 - SufE family Fe-S metabolism protein 143 58.38 0 160944..162065 + 373 86607646 - CYB_0144 - putative zinc ABC transporter, periplasmic zinc-binding protein 144 62.30 0 162062..162862 + 266 86607647 - CYB_0145 - manganese/zinc/iron chelate ABC transporter ATP-binding protein 145 59.74 0 162873..163709 + 278 86607648 - CYB_0147 - manganese/zinc/iron chelate ABC transporter permease 146 62.32 0 163678..164529 - 283 86607649 - CYB_0146 - hypothetical protein 147 55.00 0 165050..165229 + 59 86607650 rpmF CYB_0148 - 50S ribosomal protein L32 148 59.95 0 165341..165757 + 138 86607651 - CYB_0149 - DnaJ domain-containing protein 149 55.30 0 165885..166148 + 87 86607652 - CYB_0150 - hypothetical protein 150 62.06 0 166156..166914 + 252 86607653 - CYB_0151 - glyoxalase II family protein 151 62.90 +1 167037..168230 - 397 86607654 - CYB_0152 - major facilitator transporter 152 46.38 -2 168273..168617 - 114 86607655 - CYB_0153 - hypothetical protein 153 53.01 -1 168927..169358 - 143 86607656 crcB CYB_0154 - crcB protein 154 61.67 0 169411..171030 - 539 86607657 - CYB_0155 - sodium/hydrogen exchanger/universal stress family protein 155 57.32 0 171358..171999 - 213 86607658 - CYB_0156 - hypothetical protein 156 61.06 0 172007..172630 - 207 86607659 hisIE CYB_0157 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 157 58.33 0 172724..172831 - 35 86607660 - CYB_0158 - hypothetical protein 158 54.29 -1 172909..173700 + 263 86607661 phnC-1 CYB_0159 - phosphonate ABC transporter, ATP-binding protein 159 53.96 -1 173747..174643 + 298 86607662 phnD-1 CYB_0160 - phosphonate ABC tranporter, periplasmic phosphonate-binding protein 160 56.04 0 174612..175430 + 272 86607663 phnE-1 CYB_0161 - phosphonate ABC transporter, permease protein 161 62.14 0 175440..175859 + 139 86607664 - CYB_0162 - putative phosphonate metabolism protein PhnG 162 62.28 0 175868..176437 + 189 86607665 phnH CYB_0163 - phosphonate metabolism protein PhnH 163 62.49 0 176422..177474 + 350 86607666 phnI CYB_0164 - phosphonate metabolism protein PhnI 164 61.71 0 177458..178324 + 288 86607667 phnJ CYB_0165 - phosphonate metabolism protein PhnJ 165 59.51 0 178317..179084 + 255 86607668 phnK CYB_0166 - phosphonate C-P lyase system protein PhnK 166 58.48 0 179095..179790 + 231 86607669 phnL CYB_0167 - phosphonate C-P lyase system protein PhnL 167 61.75 0 179771..180910 + 379 86607670 - CYB_0168 - putative phosphonate metabolism protein PhnM 168 62.02 0 180951..183122 - 723 86607671 - CYB_0169 - polysaccharide deacetylase family protein 169 58.89 0 183572..183931 - 119 86607672 - CYB_0170 - CpcD/allophycocyanin linker domain-containing protein 170 60.36 0 184303..184857 + 184 86607673 - CYB_0171 - hypothetical protein 171 52.33 -1 184891..186201 - 436 86607674 - CYB_0172 - hypothetical protein 172 58.30 0 186762..187454 - 230 86607675 - CYB_0174 - DNA-binding response regulator 173 57.62 0 187662..188435 + 257 86607676 - CYB_0175 - hypothetical protein 174 61.93 0 188444..189625 - 393 86607677 - CYB_0176 - glycosyl transferase, group 2 175 52.01 -1 189779..190126 + 115 86607678 - CYB_0177 - anti-anti-sigma factor family protein 176 58.30 0 190206..191030 - 274 86607679 - CYB_0178 - TPR domain-containing protein 177 59.01 0 191204..192235 + 343 86607680 - CYB_0179 - iron-sulfur cluster-binding protein 178 60.27 0 192245..194026 - 593 86607681 sir CYB_0180 - sulfite reductase subunit beta 179 55.18 0 194180..196207 - 675 86607682 - CYB_0181 - peroxisomal fatty acyl CoA ABC transporter transmembrane ATP-binding protein 180 61.22 0 196291..197484 - 397 86607683 - CYB_0182 - hypothetical protein 181 56.39 0 197581..198018 - 145 86607684 - CYB_0183 - hypothetical protein 182 55.80 0 198055..198330 - 91 86607685 rpsO CYB_0184 - ribosomal protein S15 183 62.28 0 198423..199106 + 227 86607686 - CYB_0185 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit 184 54.32 -1 199111..199596 - 161 86607687 apcD CYB_0186 - allophycocyanin alpha, B subunit 185 59.97 0 199788..201146 - 452 86607688 pilT-1 CYB_0187 - twitching mobility protein PilT 186 56.96 0 201389..202078 - 229 86607689 folE CYB_0188 - GTP cyclohydrolase I 187 57.79 0 202191..202922 - 243 86607690 - CYB_0189 - short chain dehydrogenase 188 59.48 0 203165..204388 + 407 86607691 - CYB_0190 - iron ABC transporter ATP-binding protein 189 59.38 0 204872..205585 + 237 86607692 - CYB_0191 - NUDIX family hydrolase 190 52.34 -1 206258..206599 + 113 86607693 trx-1 CYB_0192 - thioredoxin 191 54.53 0 206714..207784 + 356 86607694 - CYB_0193 - hypothetical protein 192 62.54 0 207847..208548 + 233 86607695 trpF CYB_0194 - N-(5'-phosphoribosyl)anthranilate isomerase 193 59.89 0 208565..209434 - 289 86607696 - CYB_0195 - hypothetical protein 194 61.33 0 209503..210327 - 274 86607697 - CYB_0196 - RNA pseudouridine synthase family protein 195 44.97 -2 210425..210802 + 125 86607698 - CYB_0197 - ISSoc13, transposase orfA 196 42.89 -2 210760..211167 + 135 86607699 - CYB_0198 - ISSoc13, transposase orfB 197 58.61 0 211182..211715 - 177 86607700 - CYB_0199 - hypothetical protein 198 58.39 0 212012..212446 - 144 86607701 rbfA CYB_0200 - ribosome-binding factor A 199 56.71 0 212623..212853 + 76 86607702 - CYB_0201 - hypothetical protein 200 61.89 0 212976..214439 + 487 86607703 phrB-1 CYB_0202 - deoxyribodipyrimidine photolyase 201 42.89 -2 214454..214861 - 135 86607704 - CYB_0203 - ISSoc13, transposase orfB 202 44.71 -2 214819..215196 - 125 86607705 - CYB_0204 - ISSoc13, transposase orfA 203 63.88 +1 216392..217609 - 405 86607706 moeA CYB_0206 - molybdopterin biosynthesis protein MoeA 204 57.30 0 218005..218367 + 120 86607707 - CYB_0207 - putative monovalent cation/H+ antiporter subunit C 205 61.64 0 218360..219832 + 490 86607708 - CYB_0208 - putative monovalent cation/H+ antiporter subunit D 206 55.30 0 219834..220220 + 128 86607709 - CYB_0209 - hypothetical protein 207 52.78 -1 220217..220468 + 83 86607710 - CYB_0210 - hypothetical protein 208 55.67 0 220488..220769 + 93 86607711 - CYB_0211 - hypothetical protein 209 61.11 0 220779..221300 + 173 86607712 - CYB_0212 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0