version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1433 54.74 0 1544766..1545578 + 270 86608937 phnE-3 CYB_1469 - phosphonate ABC transporter, permease protein 1434 57.95 0 1546359..1547942 - 527 86608938 - CYB_1471 - NAD(P)H-quinone oxidoreductase subunit 2 1435 62.66 +1 1548067..1549365 - 432 86608939 gvpK CYB_1472 - HAD hydrolase-like protein/gas vesicle protein K 1436 59.38 0 1549452..1549931 - 159 86608940 - CYB_1473 - peptidylprolyl cis-trans isomerase, cyclophilin-type 1437 52.41 -1 1550153..1550629 - 158 86608941 - CYB_1474 - hypothetical protein 1438 56.06 0 1550679..1550876 - 65 86608942 - CYB_1475 - hypothetical protein 1439 53.76 -1 1551013..1551105 + 30 86608943 - CYB_1476 - hypothetical protein 1440 56.49 0 1551150..1552112 + 320 86608944 - CYB_1477 - sigma-70 family RNA polymerase sigma factor 1441 60.12 0 1552234..1553868 - 544 86608945 pyrG CYB_1478 - CTP synthetase 1442 65.46 +1 1553929..1554426 - 165 86608946 - CYB_1479 - hypothetical protein 1443 61.04 0 1554622..1555617 + 331 86608947 - CYB_1480 - aldo/keto reductase family oxidoreductase 1444 63.01 +1 1555786..1558380 + 864 86608948 - CYB_1481 - copper-translocating P-type ATPase 1445 59.26 0 1558659..1559549 + 296 86608949 - CYB_1482 - hypothetical protein 1446 59.66 0 1559947..1560831 + 294 86608950 - CYB_1483 - hypothetical protein 1447 52.85 -1 1560912..1561280 + 122 86608951 - CYB_1484 - roadblock/LC7 domain-contain protein 1448 52.72 -1 1561335..1561886 + 183 86608952 - CYB_1485 - hypothetical protein 1449 49.82 -2 1562119..1562664 + 181 86608953 - CYB_1486 - putative small GTP-binding protein 1450 61.17 0 1562864..1563481 + 205 86608954 pyrE CYB_1487 - orotate phosphoribosyltransferase 1451 61.05 0 1563522..1564394 + 290 86608955 - CYB_1488 - polysaccharide deacetylase family protein 1452 60.34 0 1564556..1566151 + 531 86608956 malQ CYB_1490 - 4-alpha-glucanotransferase 1453 61.17 0 1566148..1566420 - 90 86608957 - CYB_1489 - carbohydrate ABC transporter ATP-binding protein 1454 56.86 0 1566697..1566849 - 50 86608958 - CYB_1491 - carbohydrate ABC transporter ATP-binding protein 1455 57.45 0 1566888..1568699 - 603 86608959 thrS CYB_1492 - threonyl-tRNA synthetase 1456 61.92 0 1568892..1570619 + 575 86608960 - CYB_1493 - putative exopolyphosphatase 1457 61.15 0 1570638..1572323 - 561 86608961 - CYB_1494 - S-layer domain-containing protein 1458 54.88 0 1572633..1572878 + 81 86608962 psbE CYB_1495 - cytochrome b559 subunit alpha 1459 48.48 -2 1572955..1573086 + 43 86608963 psbF CYB_1496 - cytochrome b559 subunit beta 1460 49.21 -2 1573092..1573217 + 41 86608964 psbL CYB_1497 - photosystem II reaction center protein PsbL 1461 52.50 -1 1573359..1573478 + 39 86608965 psbJ CYB_1498 - photosystem II reaction center protein J 1462 57.54 0 1574007..1574477 + 156 86608966 psaL-1 CYB_1499 - photosystem I reaction center protein subunit XI 1463 48.25 -2 1574516..1574629 + 37 86608967 psaI CYB_1500 - photosystem I reaction center subunit VIII 1464 55.43 0 1574931..1575197 + 88 86608968 - CYB_1501 - hypothetical protein 1465 60.56 0 1575253..1576710 - 485 86608969 - CYB_1502 - hypothetical protein 1466 60.89 0 1577051..1578643 - 530 86608970 - CYB_1503 - DnaK family protein 1467 61.50 0 1578643..1579203 - 186 86608971 - CYB_1504 - hypothetical protein 1468 60.96 0 1579254..1579796 - 180 86608972 - CYB_1505 - hypothetical protein 1469 42.34 -2 1579854..1580075 - 73 86608973 - CYB_1506 - hypothetical protein 1470 53.61 -1 1580056..1580415 - 119 86608974 - CYB_1507 - hypothetical protein 1471 62.75 +1 1580596..1581873 + 425 86608975 trpB CYB_1508 - tryptophan synthase subunit beta 1472 65.43 +1 1581911..1582717 + 268 86608976 - CYB_1509 - hypothetical protein 1473 66.41 +1 1582707..1583471 + 254 86608977 - CYB_1510 - pantothenate kinase 1474 66.49 +1 1583525..1584661 + 378 86608978 aroC CYB_1511 - chorismate synthase 1475 63.15 +1 1584674..1586068 + 464 86608979 radA CYB_1512 - DNA repair protein RadA 1476 62.25 0 1586329..1587234 + 301 86608980 - CYB_1513 - hypothetical protein 1477 62.89 +1 1587285..1588820 + 511 86608981 lysS CYB_1514 - lysyl-tRNA synthetase 1478 62.39 0 1588914..1592726 - 1270 86608982 - CYB_1515 - TPR repeat-containing protein kinase 1479 62.30 0 1592885..1594510 - 541 86608983 - CYB_1516 - copper resistance protein CopC/D 1480 61.11 0 1594528..1595121 - 197 86608984 - CYB_1517 - nuclear export factor GLE1-like protein 1481 64.00 +1 1595184..1595483 - 99 86608985 - CYB_1518 - hypothetical protein 1482 54.39 -1 1595531..1595872 - 113 86608986 petJ CYB_1519 - cytochrome c6 1483 58.27 0 1596008..1597948 + 646 86608987 dnaG CYB_1520 - DNA primase 1484 61.51 0 1598112..1600766 - 884 86608988 alaS CYB_1521 - alanyl-tRNA synthetase 1485 60.53 0 1601051..1602712 + 553 86608989 - CYB_1522 - serine/threonine protein kinase 1486 60.52 0 1602950..1603453 - 167 86608990 - CYB_1523 - hypothetical protein 1487 59.14 0 1603736..1604917 + 393 86608991 - CYB_1525 - aldo/keto reductase family oxidoreductase 1488 50.00 -2 1605052..1605321 + 89 86608992 - CYB_1526 - hypothetical protein 1489 42.35 -2 1605318..1605572 + 84 86608993 - CYB_1527 - hypothetical protein 1490 52.48 -1 1605674..1605814 + 46 86608994 - CYB_1528 - hypothetical protein 1491 53.16 -1 1605871..1606329 - 152 86608995 - CYB_1529 - hypothetical protein 1492 54.97 0 1606419..1608770 + 783 86608996 - CYB_1530 - exonuclease family protein 1493 55.56 0 1608802..1608954 - 50 86608997 - CYB_1531 - hypothetical protein 1494 60.32 0 1609215..1609340 + 41 86608998 - CYB_1533 - hypothetical protein 1495 56.98 0 1609362..1610156 + 264 86608999 rpsB CYB_1534 - ribosomal protein S2 1496 54.05 -1 1610316..1611092 + 258 86609000 tsf CYB_1535 - elongation factor Ts 1497 61.58 0 1611315..1612730 + 471 86609001 - CYB_1536 - amidohydrolase family protein 1498 61.92 0 1612787..1613734 + 315 86609002 - CYB_1537 - iron-sulfur cluster binding protein, putative 1499 54.50 0 1613937..1615136 + 399 86609003 - CYB_1538 - hypothetical protein 1500 61.21 0 1615213..1616532 - 439 86609004 dnaN CYB_1539 - DNA polymerase III subunit beta 1501 48.65 -2 1616734..1616844 - 36 86609005 - CYB_1540 - hypothetical protein 1502 44.76 -2 1616768..1616872 + 34 86609006 - CYB_1541 - hypothetical protein 1503 59.40 0 1617021..1617254 - 77 86609007 - CYB_1542 - hypothetical protein 1504 56.02 0 1617330..1619612 - 760 86609008 - CYB_1543 - RelA/SpoT family protein 1505 60.17 0 1619763..1619993 - 76 86609009 - CYB_1544 - hypothetical protein 1506 59.84 0 1620132..1621991 - 619 86609010 pyk CYB_1545 - pyruvate kinase 1507 56.79 0 1622162..1622404 + 80 86609011 - CYB_1546 - hypothetical protein 1508 52.19 -1 1622493..1623155 - 220 86609012 - CYB_1547 - hypothetical protein 1509 60.64 0 1623299..1624045 - 248 86609013 - CYB_1548 - GvpL/GvpF family gas vesicle protein 1510 57.93 0 1624023..1625144 - 373 86609014 - CYB_1549 - nucleotidyl transferase family protein 1511 61.16 0 1625446..1626153 + 235 86609015 hisG CYB_1550 - ATP phosphoribosyltransferase catalytic subunit 1512 59.37 0 1626262..1627056 + 264 86609016 psbO CYB_1551 - photosystem II manganese-stabilizing protein 1513 58.56 0 1627317..1627427 - 36 86609017 - CYB_1552 - hypothetical protein 1514 62.95 +1 1627420..1628604 + 394 86609018 - CYB_1554 - oxidoreductase FAD-binding subunit 1515 62.18 0 1627639..1628709 - 356 86609019 - CYB_1553 - hypothetical protein 1516 61.25 0 1628714..1629673 + 319 86609020 - CYB_1556 - NAD dependent epimerase/dehydratase family protein 1517 62.47 0 1629670..1630407 - 245 86609021 devA CYB_1555 - glycolipid ABC exporter (DevE) family ATP-binding protein 1518 59.07 0 1630633..1631817 - 394 86609022 devC CYB_1557 - glycolipid ABC exporter (DevE) family permease protein 1519 64.61 +1 1631827..1632849 - 340 86609023 - CYB_1558 - membrane fusion protein family protein 1520 60.40 0 1633312..1634748 + 478 86609024 murC CYB_1559 - UDP-N-acetylmuramate--L-alanine ligase 1521 61.20 0 1634810..1635796 + 328 86609025 murB CYB_1560 - UDP-N-acetylenolpyruvoylglucosamine reductase 1522 52.73 -1 1635817..1636182 + 121 86609026 - CYB_1561 - hypothetical protein 1523 50.43 -1 1636232..1636465 - 77 86609027 - CYB_1562 - hypothetical protein 1524 61.30 0 1636487..1637269 + 260 86609028 - CYB_1564 - hypothetical protein 1525 59.11 0 1637235..1638041 - 268 86609029 est CYB_1563 - carboxylesterase 1526 61.24 0 1638083..1638856 - 257 86609030 - CYB_1565 - zinc/iron ABC transporter permease 1527 43.14 -2 1639016..1639423 - 135 86609031 - CYB_1566 - ISSoc13, transposase orfB 1528 44.44 -2 1639381..1639758 - 125 86609032 - CYB_1567 - ISSoc13, transposase orfA 1529 58.58 0 1639869..1640783 + 304 86609033 - CYB_1569 - hypothetical protein 1530 61.71 0 1640780..1641787 - 335 86609034 asd CYB_1568 - aspartate-semialdehyde dehydrogenase 1531 61.83 0 1641822..1642958 - 378 86609035 aroB CYB_1570 - 3-dehydroquinate synthase 1532 63.05 +1 1643059..1645161 - 700 86609036 - CYB_1571 - TPR repeat-containing protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0