version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 81 57.51 0 96348..98018 - 556 86607584 tig CYB_0082 - trigger factor 82 57.29 0 98090..98473 - 127 86607585 - CYB_0083 - hypothetical protein 83 60.40 0 98558..99610 - 350 86607586 - CYB_0084 - cytochrome c assembly protein 84 63.16 +1 99710..101248 + 512 86607587 - CYB_0085 - hypothetical protein 85 58.89 0 101494..102624 - 376 86607588 - CYB_0086 - hypothetical protein 86 54.11 -1 102812..104029 + 405 86607589 - CYB_0087 - ISSoc1, transposase 87 61.71 0 104064..105293 + 409 86607590 xseA CYB_0088 - exodeoxyribonuclease VII large subunit 88 55.27 0 105274..105510 + 78 86607591 xseB CYB_0089 - exodeoxyribonuclease VII, small subunit 89 62.36 0 105603..106484 + 293 86607592 folD CYB_0090 - FolD bifunctional protein 90 58.72 0 107027..107731 - 234 86607593 - CYB_0091 - hypothetical protein 91 59.22 0 107841..108458 - 205 86607594 - CYB_0092 - pyridoxamine 5'-phosphate oxidase family protein 92 58.76 0 108515..109690 - 391 86607595 - CYB_0093 - acetyltransferase 93 57.95 0 110017..110670 - 217 86607596 - CYB_0094 - hypothetical protein 94 60.79 0 110944..112338 + 464 86607597 murA CYB_0095 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 95 62.08 0 112532..114667 + 711 86607598 - CYB_0096 - Slt family transglycosylase 96 60.88 0 114811..115398 + 195 86607599 sixA CYB_0097 - phosphohistidine phosphatase SixA 97 60.54 0 115467..115760 - 97 86607600 - CYB_0098 - hypothetical protein 98 60.06 0 115840..116520 + 226 86607601 - CYB_0100 - DnaJ family protein 99 59.08 0 116512..117381 - 289 86607602 - CYB_0099 - S49 family peptidase 100 60.77 0 117452..118333 - 293 86607603 - CYB_0101 - hypothetical protein 101 56.17 0 118335..119306 - 323 86607604 - CYB_0102 - beta-carotene ketolase, putative 102 57.32 0 119664..119909 + 81 86607605 psaK CYB_0103 - photosystem I reaction center protein PsaK 103 49.61 -2 120040..120168 + 42 86607606 psbK CYB_0104 - photosystem II reaction center protein K 104 58.70 0 120507..121046 - 179 86607607 - CYB_0105 - hypothetical protein 105 56.60 0 121122..121568 - 148 86607608 - CYB_0106 - hypothetical protein 106 60.34 0 121855..122913 + 352 86607609 chlI CYB_0107 - magnesium chelatase, ATPase subunit I 107 63.09 +1 122953..123651 - 232 86607610 - CYB_0108 - hypothetical protein 108 57.87 0 124060..124593 - 177 86607611 nucH CYB_0109 - thermonuclease 109 62.02 0 124796..124924 - 42 86607612 - CYB_0110 - hypothetical protein 110 61.22 0 125417..126004 + 195 86607613 - CYB_0111 - CAAX amino terminal protease family protein 111 57.71 0 126236..127117 + 293 86607614 - CYB_0112 - phospholipase/carboxylesterase family protein 112 54.84 0 127262..127912 + 216 86607615 - CYB_0113 - anti-oxidant AhpCTSA family protein 113 56.32 0 128097..128666 - 189 86607616 scpB CYB_0114 - segregation and condensation protein B 114 58.69 0 128766..130922 - 718 86607617 - CYB_0115 - NAD(P)H-quinone oxidoreductase subunit F 115 53.99 -1 130928..131140 + 70 86607618 - CYB_0116 - hypothetical protein 116 59.10 0 131259..131615 + 118 86607619 - CYB_0117 - single-strand DNA-binding protein 117 62.70 +1 131641..132396 - 251 86607620 cobK CYB_0118 - cobalt-precorrin-6x reductase 118 56.98 0 132488..133003 + 171 86607621 - CYB_0119 - hypothetical protein 119 61.44 0 133034..133855 + 273 86607622 - CYB_0120 - MOSC domain-containing protein 120 60.16 0 133905..135134 + 409 86607623 ispG CYB_0121 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 121 56.41 0 135204..135632 - 142 86607624 - CYB_0122 - hypothetical protein 122 56.85 0 135720..136391 + 223 86607625 - CYB_0123 - hypothetical protein 123 58.92 0 136597..136893 + 98 86607626 - CYB_0124 - hypothetical protein 124 57.09 0 136913..137173 - 86 86607627 grxC CYB_0125 - glutaredoxin 3 125 53.36 -1 137266..140061 - 931 86607628 polA CYB_0126 - DNA polymerase I 126 60.38 0 140385..141068 + 227 86607629 - CYB_0127 - putative polysaccharide deacetylase 127 59.16 0 141133..141891 + 252 86607630 - CYB_0128 - pspA/IM30 family protein 128 61.14 0 142155..142679 + 174 86607631 psbP CYB_0129 - photosystem II oxygen evolving complex protein PsbP 129 57.11 0 142995..143789 + 264 86607632 icc CYB_0131 - icc protein 130 63.88 +1 143786..144610 - 274 86607633 - CYB_0130 - ABC transporter, permease protein 131 64.19 +1 144607..145536 - 309 86607634 - CYB_0132 - ABC transporter, permease protein 132 60.26 0 145666..146820 + 384 86607635 - CYB_0133 - hypothetical protein 133 61.51 0 147255..148340 - 361 86607636 - CYB_0134 - polysaccharide pyruvyl-transferase 134 56.26 0 148418..149311 - 297 86607637 - CYB_0135 - hypothetical protein 135 54.32 -1 149363..149767 - 134 86607638 psbU CYB_0136 - photosystem II complex extrinsic protein precursor U 136 62.69 +1 149926..152892 + 988 86607639 gcvP CYB_0137 - glycine dehydrogenase 137 60.27 0 152926..153597 + 223 86607640 - CYB_0138 - hypothetical protein 138 60.27 0 153600..154037 + 145 86607641 - CYB_0139 - hypothetical protein 139 58.76 0 154075..154656 + 193 86607642 - CYB_0140 - AhpC/TSA family protein 140 62.98 +1 154702..156357 + 551 86607643 - CYB_0141 - hypothetical protein 141 57.02 0 159250..160389 + 379 86607644 - CYB_0142 - cyclopropane fatty acyl phospholipid synthase 142 56.31 0 160487..160930 + 147 86607645 - CYB_0143 - SufE family Fe-S metabolism protein 143 58.38 0 160944..162065 + 373 86607646 - CYB_0144 - putative zinc ABC transporter, periplasmic zinc-binding protein 144 62.30 0 162062..162862 + 266 86607647 - CYB_0145 - manganese/zinc/iron chelate ABC transporter ATP-binding protein 145 59.74 0 162873..163709 + 278 86607648 - CYB_0147 - manganese/zinc/iron chelate ABC transporter permease 146 62.32 0 163678..164529 - 283 86607649 - CYB_0146 - hypothetical protein 147 55.00 0 165050..165229 + 59 86607650 rpmF CYB_0148 - 50S ribosomal protein L32 148 59.95 0 165341..165757 + 138 86607651 - CYB_0149 - DnaJ domain-containing protein 149 55.30 0 165885..166148 + 87 86607652 - CYB_0150 - hypothetical protein 150 62.06 0 166156..166914 + 252 86607653 - CYB_0151 - glyoxalase II family protein 151 62.90 +1 167037..168230 - 397 86607654 - CYB_0152 - major facilitator transporter 152 46.38 -2 168273..168617 - 114 86607655 - CYB_0153 - hypothetical protein 153 53.01 -1 168927..169358 - 143 86607656 crcB CYB_0154 - crcB protein 154 61.67 0 169411..171030 - 539 86607657 - CYB_0155 - sodium/hydrogen exchanger/universal stress family protein 155 57.32 0 171358..171999 - 213 86607658 - CYB_0156 - hypothetical protein 156 61.06 0 172007..172630 - 207 86607659 hisIE CYB_0157 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 157 58.33 0 172724..172831 - 35 86607660 - CYB_0158 - hypothetical protein 158 54.29 -1 172909..173700 + 263 86607661 phnC-1 CYB_0159 - phosphonate ABC transporter, ATP-binding protein 159 53.96 -1 173747..174643 + 298 86607662 phnD-1 CYB_0160 - phosphonate ABC tranporter, periplasmic phosphonate-binding protein 160 56.04 0 174612..175430 + 272 86607663 phnE-1 CYB_0161 - phosphonate ABC transporter, permease protein 161 62.14 0 175440..175859 + 139 86607664 - CYB_0162 - putative phosphonate metabolism protein PhnG 162 62.28 0 175868..176437 + 189 86607665 phnH CYB_0163 - phosphonate metabolism protein PhnH 163 62.49 0 176422..177474 + 350 86607666 phnI CYB_0164 - phosphonate metabolism protein PhnI 164 61.71 0 177458..178324 + 288 86607667 phnJ CYB_0165 - phosphonate metabolism protein PhnJ 165 59.51 0 178317..179084 + 255 86607668 phnK CYB_0166 - phosphonate C-P lyase system protein PhnK 166 58.48 0 179095..179790 + 231 86607669 phnL CYB_0167 - phosphonate C-P lyase system protein PhnL 167 61.75 0 179771..180910 + 379 86607670 - CYB_0168 - putative phosphonate metabolism protein PhnM 168 62.02 0 180951..183122 - 723 86607671 - CYB_0169 - polysaccharide deacetylase family protein 169 58.89 0 183572..183931 - 119 86607672 - CYB_0170 - CpcD/allophycocyanin linker domain-containing protein 170 60.36 0 184303..184857 + 184 86607673 - CYB_0171 - hypothetical protein 171 52.33 -1 184891..186201 - 436 86607674 - CYB_0172 - hypothetical protein 172 58.30 0 186762..187454 - 230 86607675 - CYB_0174 - DNA-binding response regulator 173 57.62 0 187662..188435 + 257 86607676 - CYB_0175 - hypothetical protein 174 61.93 0 188444..189625 - 393 86607677 - CYB_0176 - glycosyl transferase, group 2 175 52.01 -1 189779..190126 + 115 86607678 - CYB_0177 - anti-anti-sigma factor family protein 176 58.30 0 190206..191030 - 274 86607679 - CYB_0178 - TPR domain-containing protein 177 59.01 0 191204..192235 + 343 86607680 - CYB_0179 - iron-sulfur cluster-binding protein 178 60.27 0 192245..194026 - 593 86607681 sir CYB_0180 - sulfite reductase subunit beta 179 55.18 0 194180..196207 - 675 86607682 - CYB_0181 - peroxisomal fatty acyl CoA ABC transporter transmembrane ATP-binding protein 180 61.22 0 196291..197484 - 397 86607683 - CYB_0182 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0