version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1146 52.46 -1 1212203..1212730 + 175 86608650 - CYB_1174 - FHA domain-containing protein 1147 56.32 0 1212761..1213504 + 247 86608651 - CYB_1175 - hypothetical protein 1148 57.73 0 1213522..1214304 + 260 86608652 - CYB_1176 - hypothetical protein 1149 58.93 0 1214559..1215359 + 266 86608653 - CYB_1177 - putative lipoprotein 1150 57.56 0 1215658..1216239 + 193 86608654 - CYB_1178 - RNA polymerase sigma factor 1151 63.23 +1 1216236..1216991 + 251 86608655 - CYB_1179 - hypothetical protein 1152 56.76 0 1217125..1217346 + 73 86608656 - CYB_1180 - hypothetical protein 1153 59.42 0 1217387..1218214 + 275 86608657 - CYB_1181 - carbon-nitrogen family hydrolase 1154 60.92 0 1218224..1218484 + 86 86608658 - CYB_1182 - glutaredoxin family protein 1155 52.57 -1 1218522..1222019 - 1165 86608659 dnaE CYB_1183 - DNA polymerase III subunit alpha 1156 60.58 0 1222137..1223204 + 355 86608660 selD CYB_1184 - selenide, water dikinase 1157 59.24 0 1223348..1223845 + 165 86608661 - CYB_1185 - hypothetical protein 1158 59.85 0 1223892..1225124 + 410 86608662 - CYB_1186 - oligopeptide ABC transporter, permease protein 1159 58.70 0 1225172..1226113 - 313 86608663 - CYB_1187 - TPR domain-containing protein 1160 57.89 0 1226375..1227001 + 208 86608664 - CYB_1188 - hypothetical protein 1161 64.72 +1 1227223..1228095 - 290 86608665 - CYB_1189 - hypothetical protein 1162 61.90 0 1228692..1229426 + 244 86608666 - CYB_1190 - HEAT repeat-containing PBS lyase 1163 61.88 0 1229529..1230635 + 368 86608667 trmU CYB_1191 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1164 58.26 0 1230694..1231359 - 221 86608668 - CYB_1192 - hypothetical protein 1165 62.12 0 1231467..1232786 - 439 86608669 - CYB_1193 - amine oxidase, flavin-containing 1166 63.03 +1 1233137..1235416 - 759 86608670 - CYB_1194 - WD repeat-/protein kinase domain-containing protein 1167 56.10 0 1235563..1236717 + 384 86608671 - CYB_1195 - ISSoc8, transposase 1168 61.09 0 1236891..1239794 - 967 86608672 uvrA CYB_1196 - excinuclease ABC subunit A 1169 61.22 0 1239978..1242344 + 788 86608673 - CYB_1197 - putative membrane-bound protease 1170 58.81 0 1242592..1243941 + 449 86608674 - CYB_1198 - alkaline phosphatase 1171 55.21 0 1243950..1244045 + 31 86608675 - CYB_1199 - hypothetical protein 1172 55.40 0 1244278..1244703 + 141 86608676 - CYB_1200 - MarR family transcriptional regulator 1173 56.47 0 1244786..1246021 + 411 86608677 - CYB_1201 - ISSoc1, transposase 1174 61.13 0 1246086..1247060 - 324 86608678 - CYB_1202 - hydrophobic amino acid uptake ABC transporter permease 1175 56.73 0 1247141..1247623 - 160 86608679 - CYB_1203 - hypothetical protein 1176 57.49 0 1247663..1248196 + 177 86608680 - CYB_1204 - TM2 domain-containing protein 1177 60.13 0 1248215..1248994 - 259 86608681 - CYB_1205 - putative ABC-2 type transporter, permease protein 1178 60.47 0 1248994..1249929 - 311 86608682 - CYB_1206 - drug exporter ABC transporter ATP-binding protein 1179 59.82 0 1250050..1253526 - 1158 86608683 mfd CYB_1207 - transcription-repair coupling factor 1180 57.05 0 1253989..1255434 + 481 86608684 cydA CYB_1208 - cytochrome d ubiquinol oxidase, subunit I 1181 54.48 0 1255628..1256677 + 349 86608685 cydB CYB_1209 - cytochrome d ubiquinol oxidase, subunit II 1182 54.01 -1 1256771..1257394 - 207 86608686 - CYB_1210 - ISSoc2, transposase, truncation 1183 57.41 0 1257376..1259115 - 579 86608687 - CYB_1211 - hypothetical protein 1184 59.36 0 1259510..1260043 - 177 86608688 rimI CYB_1212 - ribosomal-protein-alanine acetyltransferase 1185 62.00 0 1260050..1260499 - 149 86608689 - CYB_1213 - hypothetical protein 1186 62.78 +1 1260496..1261680 - 394 86608690 purK CYB_1214 - phosphoribosylaminoimidazole carboxylase ATPase subunit 1187 57.51 0 1261703..1261975 + 90 86608691 - CYB_1215 - hypothetical protein 1188 57.89 0 1262126..1262524 + 132 86608692 - CYB_1216 - hypothetical protein 1189 61.77 0 1262530..1263285 + 251 86608693 trmD CYB_1217 - tRNA (guanine-N(1)-)-methyltransferase 1190 62.43 0 1263289..1263666 + 125 86608694 - CYB_1218 - hypothetical protein 1191 54.21 -1 1263770..1264042 + 90 86608695 secE CYB_1219 - preprotein translocase subunit SecE 1192 59.01 0 1264105..1264770 + 221 86608696 nusG CYB_1220 - transcription antitermination protein NusG 1193 58.92 0 1264780..1265205 + 141 86608697 rplK CYB_1221 - 50S ribosomal protein L11 1194 58.65 0 1265312..1266022 + 236 86608698 rplA CYB_1222 - 50S ribosomal protein L1 1195 59.75 0 1266321..1266884 + 187 86608699 rplJ CYB_1223 - 50S ribosomal protein L10 1196 58.39 0 1266950..1267360 + 136 86608700 rplL CYB_1224 - 50S ribosomal protein L7/L12 1197 58.23 0 1267418..1267654 - 78 86608701 - CYB_1225 - hypothetical protein 1198 57.93 0 1267757..1268992 + 411 86608702 - CYB_1227 - ISSoc1, transposase 1199 55.67 0 1268972..1269817 - 281 86608703 - CYB_1226 - Rieske family iron-sulfur cluster-binding protein 1200 59.71 0 1270032..1271426 + 464 86608704 - CYB_1228 - TonB family protein 1201 55.38 0 1271496..1271681 - 61 86608705 rpsU CYB_1229 - 30S ribosomal protein S21 1202 62.70 +1 1272036..1273322 - 428 86608706 - CYB_1230 - trypsin domain-containing lipoprotein 1203 60.46 0 1273448..1274140 + 230 86608707 - CYB_1231 - putative partition protein A 1204 59.18 0 1274137..1274430 + 97 86608708 - CYB_1232 - hypothetical protein 1205 63.02 +1 1274682..1275860 + 392 86608709 dxr CYB_1233 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1206 60.77 0 1275920..1277683 + 587 86608710 - CYB_1234 - heavy metal ABC transporter (HMT) family permease/ATP-binding protein 1207 64.71 +1 1277744..1279276 + 510 86608711 murE CYB_1235 - UDP-N-acetylmuramyl-tripeptide synthetase 1208 62.21 0 1279279..1280466 - 395 86608712 carA CYB_1236 - carbamoyl phosphate synthase small subunit 1209 55.09 0 1280528..1281391 - 287 86608713 - CYB_1237 - type IV pilin, putative 1210 56.87 0 1281432..1282544 - 370 86608714 - CYB_1238 - type IV pilin, putative 1211 58.73 0 1282595..1283350 - 251 86608715 - CYB_1239 - type IV pilin, putative 1212 60.26 0 1283415..1290932 - 2505 86608716 - CYB_1240 - hypothetical protein 1213 59.17 0 1290942..1291061 - 39 86608717 - CYB_1241 - hypothetical protein 1214 62.48 0 1291088..1291684 - 198 86608718 - CYB_1242 - DNA-binding response regulator 1215 62.18 0 1291789..1292412 - 207 86608719 - CYB_1243 - pentapeptide repeat-containing protein 1216 60.71 0 1292499..1293338 - 279 86608720 mutM CYB_1244 - formamidopyrimidine-DNA glycosylase 1217 53.78 -1 1293385..1293609 - 74 86608721 psaE CYB_1245 - photosystem I reaction center subunit IV 1218 62.82 +1 1293729..1294613 + 294 86608722 - CYB_1246 - penicillin-binding protein 1219 55.56 0 1294730..1294882 + 50 86608723 - CYB_1247 - CAB/ELIP/HLIP family protein 1220 61.60 0 1295153..1296829 - 558 86608724 nadE CYB_1248 - NAD+ synthetase 1221 54.53 0 1296879..1297727 - 282 86608725 - CYB_1249 - sensor histidine kinase 1222 51.33 -1 1297936..1300380 - 814 86608726 - CYB_1250 - sensory box protein 1223 55.13 0 1300591..1302462 - 623 86608727 uvrC CYB_1251 - excinuclease ABC subunit C 1224 54.17 -1 1303083..1303178 + 31 86608728 - CYB_1252 - hypothetical protein 1225 61.85 0 1303586..1308193 + 1535 86608729 gltS CYB_1253 - ferredoxin-dependent glutamate synthase 1226 57.42 0 1308298..1309389 + 363 86608730 acsF CYB_1254 - magnesium-protoporphyrin IX monomethyl ester cyclase 1227 62.67 +1 1309437..1310912 + 491 86608731 - CYB_1255 - hypothetical protein 1228 63.20 +1 1310954..1312915 + 653 86608732 - CYB_1256 - TPR domain-containing protein 1229 59.43 0 1313018..1314289 + 423 86608733 - CYB_1257 - chromate transporter 1230 58.16 0 1314364..1315503 - 379 86608734 lgt-1 CYB_1258 - prolipoprotein diacylglyceryl transferase 1231 57.26 0 1315983..1316333 + 116 86608735 - CYB_1260 - hypothetical protein 1232 57.12 0 1316313..1317548 - 411 86608736 - CYB_1259 - ISSoc1, transposase 1233 60.55 0 1317828..1319036 + 402 86608737 - CYB_1261 - coenzyme F420 hydrogenase/dehydrogenase family protein 1234 63.58 +1 1319040..1320236 - 398 86608738 - CYB_1262 - aspartate aminotransferase 1235 61.09 0 1320403..1321782 + 459 86608739 engA CYB_1263 - GTP-binding protein EngA 1236 59.57 0 1321806..1322270 + 154 86608740 smpB CYB_1264 - SsrA-binding protein 1237 58.21 0 1322410..1323615 + 401 86608741 - CYB_1265 - hypothetical protein 1238 58.37 0 1323627..1324229 - 200 86608742 - CYB_1266 - glutathione S-transferase 1239 58.16 0 1324328..1325515 - 395 86608743 - CYB_1267 - Rieske family iron-sulfur cluster-binding protein 1240 62.89 +1 1325696..1326781 - 361 86608744 era CYB_1268 - GTP-binding protein Era 1241 60.84 0 1327064..1328677 - 537 86608745 - CYB_1269 - SpoIID/LytB domain-containing protein 1242 61.94 0 1328938..1329297 + 119 86608746 - CYB_1270 - hypothetical protein 1243 60.47 0 1329387..1330193 + 268 86608747 - CYB_1271 - oxidoreductase, molybdopterin-binding subunit 1244 55.86 0 1330656..1331201 + 181 86608748 - CYB_1272 - type IV pilin, putative 1245 55.17 0 1331510..1331944 + 144 86608749 - CYB_1274 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0