version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 639 62.67 0 678143..679594 - 483 86605381 zds CYA_0668 - carotene 7,8-desaturase 640 47.62 -2 679605..679709 - 34 86605382 - CYA_0669 - hypothetical protein 641 61.36 0 679854..680588 - 244 86605383 - CYA_0671 - D-alanyl-D-alanine carboxypeptidase 642 55.71 -1 680628..681065 - 145 86605384 - CYA_0672 - anti-oxidant AhpCTSA family protein 643 64.10 0 681136..681759 - 207 86605385 - CYA_0673 - HD domain-containing protein 644 57.83 0 683434..684870 + 478 86605387 mgtE-1 CYA_0675 - magnesium transporter 645 58.24 0 684900..685172 + 90 86605388 - CYA_0676 - hypothetical protein 646 59.40 0 685207..685908 + 233 86605389 - CYA_0677 - mgtC family protein 647 59.46 0 686139..686762 - 207 86605390 - CYA_0678 - hypothetical protein 648 52.03 -1 687174..687296 + 40 86605391 - CYA_0679 - hypothetical protein 649 59.45 0 687319..687720 + 133 86605392 - CYA_0680 - hypothetical protein 650 55.29 -1 688002..688256 + 84 86605393 - CYA_0682 - hypothetical protein 651 60.22 0 688253..688795 - 180 86605394 - CYA_0681 - hypothetical protein 652 55.56 -1 688930..689640 - 236 86605395 - CYA_0683 - hypothetical protein 653 58.13 0 689690..690649 - 319 86605396 - CYA_0684 - nucleotidyl transferase family protein 654 57.41 0 691106..691969 + 287 86605397 - CYA_0685 - cystine ABC transporter, cystine-binding protein 655 56.88 0 692083..692787 + 234 86605398 - CYA_0686 - cystine ABC transporter, permease protein 656 55.94 0 693323..694534 + 403 86605399 - CYA_0687 - ISSoc1, transposase 657 60.26 0 694687..696402 + 571 86605400 sdhA CYA_0688 - succinate dehydrogenase flavoprotein subunit 658 59.08 0 696542..697939 + 465 86605401 - CYA_0689 - beta alanine--pyruvate transaminase 659 56.22 0 698056..699204 - 382 86605402 - CYA_0690 - ISSoc1, transposase 660 58.00 0 699490..699639 - 49 86605403 - CYA_0691 - hypothetical protein 661 60.88 0 699774..701018 + 414 86605404 - CYA_0693 - GTP-binding domain-containing protein 662 61.40 0 701015..701869 - 284 86605405 lipA-1 CYA_0692 - lipoyl synthase 663 56.97 0 702091..702585 - 164 86605406 - CYA_0694 - hypothetical protein 664 56.96 0 703051..703287 - 78 86605407 - CYA_0695 - hypothetical protein 665 49.83 -2 703721..704017 + 98 86605408 - CYA_0696 - hypothetical protein 666 56.24 0 703998..704966 + 322 86605409 - CYA_0697 - MazG family protein 667 59.09 0 705228..705359 + 43 86605410 - CYA_0698 - hypothetical protein 668 57.59 0 705467..706513 + 348 86605411 - CYA_0699 - 2OG-Fe(II) oxygenase family oxidoreductase 669 62.53 0 706635..707576 + 313 86605412 - CYA_0700 - putative protease 670 57.99 0 707669..708175 + 168 86605413 - CYA_0701 - hypothetical protein 671 63.22 0 708185..710911 - 908 86605414 - CYA_0702 - polyA polymerase family protein 672 57.92 0 711147..711695 - 182 86605415 frr CYA_0703 - ribosome recycling factor 673 56.85 0 711934..712473 + 179 86605416 - CYA_0705 - hypothetical protein 674 55.36 -1 712445..713638 - 397 86605417 - CYA_0704 - ISSoc1, transposase 675 59.91 0 713715..714350 - 211 86605418 - CYA_0706 - hypothetical protein 676 58.33 0 714927..715322 + 131 86605419 - CYA_0708 - hypothetical protein 677 66.04 +1 715289..715768 - 159 86605420 - CYA_0707 - hypothetical protein 678 64.64 +1 715879..717159 + 426 86605421 ahcY CYA_0709 - S-adenosyl-L-homocysteine hydrolase 679 65.84 +1 717300..718511 - 403 86605422 argG CYA_0710 - argininosuccinate synthase 680 53.22 -1 718783..718953 - 56 86605423 - CYA_0711 - hypothetical protein 681 57.43 0 719078..719575 + 165 86605424 - CYA_0712 - hypothetical protein 682 65.29 +1 719654..720526 + 290 86605425 lipA-2 CYA_0714 - lipoyl synthase 683 64.03 0 720523..721737 - 404 86605426 - CYA_0713 - GTP-binding domain-containing protein 684 56.86 0 721730..721882 + 50 86605427 - CYA_0715 - hypothetical protein 685 60.67 0 721907..722056 + 49 86605428 - CYA_0716 - hypothetical protein 686 48.48 -2 722156..722287 + 43 86605429 - CYA_0717 - hypothetical protein 687 58.73 0 722265..722768 + 167 86605430 aroQ CYA_0718 - 3-dehydroquinate dehydratase 688 59.22 0 723012..723548 - 178 86605431 - CYA_0719 - thioredoxin 689 64.18 0 723925..727215 + 1096 86605432 - CYA_0721 - SbcC family exonuclease 690 61.57 0 727212..727643 - 143 86605433 - CYA_0720 - hypothetical protein 691 60.67 0 727936..728202 - 88 86605434 - CYA_0722 - hypothetical protein 692 57.32 0 728199..728519 - 106 86605435 - CYA_0723 - hypothetical protein 693 67.20 +1 728569..730068 - 499 86605436 - CYA_0724 - CobN/magnesium chelatase domain-containing protein 694 58.86 0 730086..731264 - 392 86605437 tal CYA_0725 - transaldolase/EF-hand domain-containing protein 695 55.50 -1 731379..732659 - 426 86605438 - CYA_0726 - ISSoc2, transposase 696 52.19 -1 732514..733107 - 197 86605439 - CYA_0727 - ISSoc2, resolvase 697 55.31 -1 733729..734001 - 90 86605440 cas2-2 CYA_0728 - CRISPR-associated Cas2 family protein 698 50.21 -2 734001..734948 - 315 86605441 cas1-1 CYA_0729 - CRISPR-associated Cas1 family protein 699 50.39 -2 734975..735607 - 210 86605442 cse3 CYA_0730 - CRISPR-associated Cse3 family protein 700 54.17 -1 735589..736212 - 207 86605443 cas5e CYA_0731 - CRISPR-associated Cas5 family Ecoli subtype protein 701 48.73 -2 736216..737358 - 380 86605444 cse4 CYA_0732 - CRISPR-associated Cse4 family protein 702 44.33 -2 737425..738024 - 199 86605445 cse2 CYA_0733 - CRISPR-associated Cse2 family protein 703 47.43 -2 738036..739610 - 524 86605446 cse1 CYA_0734 - CRISPR-associated Cse1 family protein 704 56.11 0 739627..742308 - 893 86605447 cas3 CYA_0735 - CRISPR-associated helicase Cas3 705 57.65 0 742311..743219 - 302 86605448 - CYA_0736 - hypothetical protein 706 55.23 -1 743274..743990 + 238 90296793 - CYA_0737 - ISSoc8, transposase, interruption-N 707 55.10 -1 744741..745103 + 120 90296794 - CYA_0739 - ISSoc8, transposase, interruption-C 708 56.90 0 745048..745221 - 57 86605449 - CYA_0738 - hypothetical protein 709 65.06 +1 745386..746318 - 310 86605450 - CYA_0740 - RluA family pseudouridine synthase 710 63.41 0 746652..749111 + 819 86605451 ppsA CYA_0741 - phosphoenolpyruvate synthase 711 63.25 0 749181..750440 + 419 86605452 - CYA_0742 - branched-chain alpha-keto acid dehydrogenase subunit E2 712 58.62 0 750971..752635 + 554 86605453 - CYA_0743 - putative lipoprotein 713 54.03 -1 752909..753541 - 210 86605454 - CYA_0744 - NADH dehydrogenase subunit I 714 58.38 0 753577..754698 - 373 86605455 - CYA_0745 - NADH dehydrogenase subunit H 715 61.76 0 754760..754963 - 67 86605456 - CYA_0746 - hypothetical protein 716 60.17 0 754994..756178 - 394 86605457 - CYA_0747 - NAD(P)H-quinone oxidoreductase subunit H 717 63.84 0 756346..756663 + 105 86605458 - CYA_0748 - hypothetical protein 718 59.86 0 756755..757312 - 185 86605459 - CYA_0749 - carboxymuconolactone decarboxylase family protein 719 60.32 0 757386..757637 - 83 86605460 - CYA_0750 - hypothetical protein 720 65.30 +1 758348..759151 + 267 86605461 ureD CYA_0753 - urease accessory protein UreD 721 62.31 0 759189..760703 + 504 86605462 - CYA_0754 - hypothetical protein 722 61.86 0 760890..762491 - 533 86605463 - CYA_0756 - dolichyl-phosphate-mannose-protein mannosyltransferase 723 58.88 0 762688..763470 - 260 86605464 - CYA_0757 - hypothetical protein 724 56.21 0 763464..764027 - 187 86605465 - CYA_0758 - hypothetical protein 725 61.19 0 764247..765707 - 486 86605466 ftsY CYA_0759 - signal recognition particle-docking protein FtsY 726 59.84 0 765802..766650 - 282 86605467 purU CYA_0760 - formyltetrahydrofolate deformylase 727 59.00 0 766952..767290 - 112 86605468 tatA-1 CYA_0761 - twin-arginine translocation protein TatA 728 61.47 0 767499..770363 + 954 86605469 secA CYA_0762 - preprotein translocase subunit SecA 729 61.79 0 770446..771204 - 252 86605470 - CYA_0763 - pspA/IM30 family protein 730 62.87 0 771239..771949 - 236 86605471 - CYA_0764 - putative polysaccharide deacetylase 731 62.84 0 771959..774466 - 835 86605472 - CYA_0765 - U32 family peptidase 732 58.73 0 774623..774748 - 41 86605473 - CYA_0766 - hypothetical protein 733 55.36 -1 774780..775973 - 397 86605474 - CYA_0767 - ISSoc1, transposase 734 60.40 0 776204..776698 - 164 86605475 sixA CYA_0768 - phosphohistidine phosphatase SixA 735 54.09 -1 776958..777299 + 113 86605476 trx-1 CYA_0769 - thioredoxin 736 55.18 -1 777430..778500 + 356 86605477 - CYA_0770 - hypothetical protein 737 62.85 0 778523..779203 + 226 86605478 trpF CYA_0771 - N-(5'-phosphoribosyl)anthranilate isomerase 738 61.01 0 779226..780056 - 276 86605479 - CYA_0772 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0