version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 15 56.82 0 15513..16040 - 175 86604748 - CYA_0015 - hypothetical protein 16 62.61 0 16201..16965 - 254 86604749 gvpW CYA_0016 - gas vesicle protein W 17 62.32 0 17166..17786 + 206 86604750 - CYA_0018 - hypothetical protein 18 64.89 +1 17769..18500 - 243 86604751 surE CYA_0017 - stationary phase survival protein SurE 19 62.60 0 18689..19720 + 343 86604752 gap-1 CYA_0020 - glyceraldehyde-3-phosphate dehydrogenase, type I 20 65.88 +1 19706..20212 - 168 86604753 folK CYA_0019 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 21 61.02 0 20219..20590 - 123 86604754 folB CYA_0021 - dihydroneopterin aldolase 22 63.68 0 20577..21446 - 289 86604755 folP CYA_0022 - dihydropteroate synthase 23 50.00 -2 21788..21895 - 35 86604756 - CYA_0023 - hypothetical protein 24 60.99 0 22084..23175 - 363 86604757 - CYA_0024 - translation-associated GTPase 25 62.51 0 23329..24723 - 464 86604758 rumA CYA_0025 - 23S rRNA (uracil-5-)-methyltransferase RumA 26 65.89 +1 24911..26074 - 387 86604759 - CYA_0026 - O-antigen polymerase family protein 27 62.57 0 26202..26567 - 121 86604760 - CYA_0027 - ferredoxin, 2Fe-2S 28 59.16 0 26693..27145 + 150 86604761 - CYA_0028 - putative mannose-6-phosphate isomerase 29 61.38 0 27153..29534 - 793 86604762 - CYA_0029 - M48B family peptidase 30 54.81 -1 29715..30161 - 148 86604763 - CYA_0030 - FUR family transcriptional regulator 31 62.99 0 30488..30868 + 126 86604764 - CYA_0031 - hypothetical protein 32 66.12 +1 30915..32189 + 424 86604765 - CYA_0032 - putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 33 59.94 0 32567..33220 + 217 86604766 - CYA_0034 - hypothetical protein 34 56.69 0 33590..34060 + 156 86604767 psaL-1 CYA_0035 - photosystem I reaction center protein subunit XI 35 50.88 -2 34110..34223 + 37 86604768 psaI CYA_0036 - photosystem I reaction center subunit VIII 36 46.62 -2 34557..34955 + 132 86604769 - CYA_0037 - ISSoc4, transposase orfA 37 46.56 -2 34937..35488 + 183 86604770 - CYA_0038 - ISSoc4, transposase orfB 38 62.78 0 35581..37047 - 488 86604771 - CYA_0039 - hypothetical protein 39 61.86 0 37430..38884 + 484 86604772 - CYA_0041 - bacteriochlorophyll delivery (BCD) family transporter 40 64.63 0 38881..39174 - 97 86604773 - CYA_0040 - hypothetical protein 41 63.96 0 39584..41692 + 702 86604774 - CYA_0042 - WD domain-/G-beta repeat-containing protein 42 63.51 0 41742..43040 + 432 86604775 - CYA_0043 - amine oxidase, flavin-containing 43 56.10 0 43128..43799 + 223 86604776 - CYA_0044 - hypothetical protein 44 56.10 0 43925..44719 + 264 86604777 - CYA_0045 - hypothetical protein 45 62.62 0 44778..45890 - 370 86604778 trmU CYA_0046 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 46 63.35 0 45989..46711 - 240 86604779 - CYA_0047 - HEAT repeat-containing PBS lyase 47 64.48 0 46915..47829 + 304 86604780 - CYA_0048 - hypothetical protein 48 56.09 0 48013..48570 - 185 86604781 - CYA_0049 - hypothetical protein 49 60.65 0 48908..49837 + 309 86604782 - CYA_0050 - TPR repeat-containing protein 50 62.71 0 49892..51004 - 370 86604783 - CYA_0051 - oligopeptide ABC transporter, permease protein 51 59.54 0 50663..51715 + 350 86604784 - CYA_0054 - hypothetical protein 52 60.68 0 51170..51670 - 166 86604785 - CYA_0052 - hypothetical protein 53 45.68 -2 51700..52647 - 315 86604786 - CYA_0053 - ISSoc4, transposase orfAB 54 64.59 0 52802..53860 - 352 86604787 selD CYA_0055 - selenide, water dikinase 55 54.68 -1 53979..57464 + 1161 86604788 dnaE CYA_0057 - DNA polymerase III subunit alpha 56 66.30 +1 57450..57725 - 91 86604789 - CYA_0056 - glutaredoxin family protein 57 63.16 0 57735..58562 - 275 86604790 - CYA_0058 - carbon-nitrogen family hydrolase 58 59.91 0 58599..58820 - 73 86604791 - CYA_0059 - hypothetical protein 59 64.25 0 59052..59795 - 247 86604792 - CYA_0060 - hypothetical protein 60 58.08 0 59792..60373 - 193 86604793 - CYA_0061 - RNA polymerase sigma factor 61 61.96 0 60603..61409 - 268 86604794 - CYA_0062 - putative lipoprotein 62 57.26 0 61552..61668 - 38 86604795 - CYA_0063 - hypothetical protein 63 58.75 0 61714..62496 - 260 86604796 - CYA_0064 - hypothetical protein 64 58.20 0 62514..63257 - 247 86604797 - CYA_0065 - hypothetical protein 65 59.47 0 63306..63791 - 161 86604798 - CYA_0066 - FHA domain-containing protein 66 51.78 -1 65283..65759 + 158 86604799 - CYA_0068 - ISSoc3, orfA transposase 67 60.75 0 66081..66722 + 213 86604800 - CYA_0069 - hypothetical protein 68 62.74 0 66762..67652 + 296 86604801 - CYA_0070 - hypothetical protein 69 59.79 0 68588..69808 + 406 86604802 chlP CYA_0072 - geranylgeranyl reductase 70 60.40 0 69815..70660 - 281 86604803 - CYA_0073 - hypothetical protein 71 61.84 0 71021..72367 + 448 86604804 secD CYA_0074 - preprotein translocase subunit SecD 72 60.54 0 72364..73359 + 331 86604805 secF CYA_0075 - preprotein translocase subunit SecF 73 67.01 +1 73398..75167 - 589 86604806 - CYA_0076 - hypothetical protein 74 62.48 0 75903..77240 + 445 86604807 murF CYA_0077 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 75 55.86 0 77338..77559 + 73 86604808 - CYA_0078 - hypothetical protein 76 57.54 0 77913..78449 + 178 86604809 - CYA_0079 - fasciclin domain-containing protein 77 57.94 0 78557..79003 - 148 86604810 - CYA_0080 - hypothetical protein 78 64.83 +1 79112..80905 + 597 86604811 menD CYA_0082 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 79 64.71 +1 80829..81851 - 340 86604812 miaA CYA_0081 - tRNA delta(2)-isopentenylpyrophosphate transferase 80 62.53 0 82003..82824 + 273 86604813 - CYA_0083 - hypothetical protein 81 62.03 0 82982..83692 - 236 86604814 rpe CYA_0084 - ribulose-phosphate 3-epimerase 82 60.22 0 83852..84037 - 61 86604815 - CYA_0085 - hypothetical protein 83 63.99 0 84185..84595 + 136 86604816 - CYA_0086 - glyoxalase family protein 84 66.67 +1 84592..86178 + 528 86604817 - CYA_0088 - carbohydrate kinase family protein 85 62.94 0 86175..87005 - 276 86604818 - CYA_0087 - putative undecaprenol kinase 86 61.84 0 87209..87829 - 206 86604819 - CYA_0089 - hypothetical protein 87 53.23 -1 88002..88187 - 61 86604820 - CYA_0090 - hypothetical protein 88 59.14 0 88306..89487 - 393 86604821 - CYA_0091 - ISSoc1, transposase 89 59.45 0 89675..90367 - 230 86604822 - CYA_0092 - hypothetical protein 90 55.56 -1 90367..91023 - 218 86604823 - CYA_0093 - response regulator 91 59.96 0 91262..92380 + 372 86604824 - CYA_0094 - UbiE/COQ5 family methlytransferase 92 60.40 0 92497..92991 + 164 86604825 - CYA_0095 - hypothetical protein 93 59.13 0 93105..93449 + 114 86604826 - CYA_0096 - hypothetical protein 94 63.97 0 93643..95199 + 518 86604827 - CYA_0097 - major facilitator transporter 95 58.82 0 95249..95350 + 33 86604828 - CYA_0098 - hypothetical protein 96 62.80 0 95382..96572 + 396 86604829 - CYA_0099 - glycosyl transferase, group 1 97 61.92 0 96917..98413 + 498 86604830 - CYA_0100 - GAF/SpoIIE domain-containing protein 98 57.53 0 98507..98725 + 72 86604831 - CYA_0102 - hypothetical protein 99 61.11 0 98709..98816 - 35 86604832 - CYA_0101 - hypothetical protein 100 62.65 0 98857..100326 + 489 86604833 argH CYA_0103 - argininosuccinate lyase 101 61.19 0 100418..101038 + 206 86604834 - CYA_0104 - hypothetical protein 102 59.92 0 101454..101705 + 83 86604835 - CYA_0105 - hypothetical protein 103 62.59 0 101922..103049 + 375 86604836 - CYA_0107 - UDP-N-acetylglucosamine 2-epimerase 104 56.59 0 103038..103166 - 42 86604837 - CYA_0106 - hypothetical protein 105 57.03 0 103453..103701 - 82 86604838 - CYA_0108 - hypothetical protein 106 62.39 0 104219..105340 + 373 86604839 ftsZ CYA_0109 - cell division protein FtsZ 107 64.61 0 105410..106381 + 323 86604840 ddlB CYA_0110 - D-alanine--D-alanine ligase B 108 62.42 0 106401..106871 - 156 86604841 - CYA_0111 - hypothetical protein 109 58.71 0 107039..107704 + 221 86604842 chlM CYA_0112 - Mg-protoporphyrin IX methyl transferase 110 62.78 0 107756..108475 - 239 86604843 - CYA_0113 - HEAT repeat-containing PBS lyase 111 62.52 0 108623..109369 - 248 86604844 - CYA_0114 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 112 61.64 0 109442..110236 - 264 86604845 - CYA_0115 - hypothetical protein 113 61.80 0 110298..111221 - 307 86604846 - CYA_0116 - hypothetical protein 114 59.38 0 111443..113350 + 635 86604847 - CYA_0117 - endonuclease/exonuclease/phosphatase family protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.