version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 564 63.76 0 597478..598887 - 469 86605302 - CYA_0586 - GTP-binding domain-containing protein 565 60.35 0 599119..599403 + 94 86605303 - CYA_0587 - hypothetical protein 566 63.76 0 599457..600041 + 194 86605304 - CYA_0588 - WD-40-like beta propeller repeat-containing protein 567 63.29 0 600076..601260 + 394 86605305 - CYA_0589 - succinyldiaminopimelate transaminase 568 58.20 0 601421..602164 + 247 86605306 - CYA_0590 - hypothetical protein 569 65.60 +1 602408..603721 + 437 86605307 hisD CYA_0591 - histidinol dehydrogenase 570 63.29 0 603885..604595 + 236 86605308 - CYA_0592 - hypothetical protein 571 61.76 0 604692..604997 + 101 86605309 - CYA_0593 - hypothetical protein 572 65.74 +1 605022..606212 + 396 86605310 - CYA_0594 - TPR repeat-containing protein 573 53.24 -1 606572..607189 + 205 86605311 - CYA_0595 - ISSoc2, resolvase 574 55.25 -1 607044..608261 + 405 86605312 - CYA_0596 - ISSoc2, transposase 575 56.00 0 608382..609281 + 299 86605313 - CYA_0597 - RNA polymerase sigma factor SigF 576 54.09 -1 609477..610247 - 256 86605314 - CYA_0598 - hypothetical protein 577 59.18 0 610837..611103 + 88 86605316 - CYA_0600 - hypothetical protein 578 59.94 0 611850..613559 + 569 86605319 ureC CYA_0603 - urease subunit alpha 579 56.89 0 613567..614016 + 149 86605320 ureE CYA_0604 - urease accessory protein UreE 580 58.56 0 614023..614676 + 217 86605321 ureF CYA_0605 - urease accessory protein UreF 581 59.11 0 614688..615296 + 202 86605322 ureG CYA_0606 - urease accessory protein UreG 582 55.93 0 615313..616104 + 263 86605323 - CYA_0607 - putative urease accessory protein UreD 583 59.56 0 617290..617655 + 121 86605324 - CYA_0609 - hypothetical protein 584 62.87 0 618095..619252 + 385 86605325 - CYA_0610 - SCP family protein 585 62.27 0 619713..621260 + 515 86605327 nirA CYA_0612 - ferredoxin-nitrite reductase 586 59.94 0 621322..622644 + 440 86605328 nrtA CYA_0613 - nitrate ABC transporter, nitrate-binding protein NrtA 587 55.21 -1 622778..623737 + 319 86605329 ntrB-1 CYA_0614 - nitrate ABC transporter, permease protein NrtB 588 59.89 0 623810..625801 + 663 86605330 ntrC-1 CYA_0615 - nitrate ABC transporter, ATP-binding protein NtrC 589 52.91 -1 625840..626682 + 280 86605331 ntrD-1 CYA_0616 - nitrate ABC transporter, ATP-binding protein NtrD 590 50.84 -2 626716..627132 + 138 86605332 - CYA_0618 - hypothetical protein 591 41.67 -2 627118..627213 - 31 86605333 - CYA_0617 - hypothetical protein 592 56.37 0 627358..629493 + 711 86605334 narB CYA_0619 - nitrate reductase 593 51.63 -1 629518..630009 + 163 86605335 - CYA_0621 - hypothetical protein 594 55.86 0 629981..631174 - 397 86605336 - CYA_0620 - ISSoc1, transposase 595 63.66 0 631635..632930 - 431 86605337 purD CYA_0622 - phosphoribosylamine--glycine ligase 596 67.82 +1 633056..634186 - 376 86605338 - CYA_0623 - glycosyl transferase, group 2 family protein 597 62.25 0 634313..635602 - 429 86605339 - CYA_0624 - HD domain-containing protein 598 66.67 +1 635727..636782 + 351 86605340 - CYA_0625 - GDSL-like lipase/acylhydrolase domain-containing protein 599 60.94 0 636800..638650 - 616 86605341 - CYA_0626 - metallo-beta-lactamase family protein 600 55.81 0 638904..639824 - 306 86605342 dapA CYA_0627 - dihydrodipicolinate synthase 601 62.36 0 640132..640758 + 208 86605343 - CYA_0628 - nitroreductase family protein 602 63.86 0 641898..642929 - 343 86605344 trpD CYA_0630 - anthranilate phosphoribosyltransferase 603 64.67 +1 642959..643759 - 266 86605345 - CYA_0631 - hypothetical protein 604 62.75 0 643786..644448 - 220 86605346 purN CYA_0632 - phosphoribosylglycinamide formyltransferase 605 61.36 0 645187..645657 + 156 86605347 - CYA_0633 - hypothetical protein 606 59.07 0 645674..646252 + 192 86605348 aat CYA_0634 - leucyl/phenylalanyl-tRNA--protein transferase 607 57.92 0 646344..646526 + 60 86605349 - CYA_0635 - hypothetical protein 608 60.05 0 646673..647806 + 377 86605350 sasA CYA_0637 - adaptive-response sensory kinase 609 55.29 -1 647772..648272 - 166 86605351 - CYA_0636 - fasciclin domain-containing protein 610 55.61 -1 648407..649717 - 436 86605352 - CYA_0638 - CO2 hydration protein 611 59.93 0 649763..651292 - 509 86605353 - CYA_0639 - NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein 612 62.20 0 651333..653168 - 611 86605354 - CYA_0640 - NAD(P)H-quinone oxidoreductase subunit F 613 60.49 0 653300..653461 - 53 86605355 - CYA_0641 - hypothetical protein 614 51.85 -1 653521..653628 - 35 86605356 psbM CYA_0642 - photosystem II reaction center protein M 615 58.25 0 653709..654005 - 98 86605357 - CYA_0643 - iron-sulfur cluster-binding protein 616 60.53 0 654368..655900 + 510 86605358 psbB CYA_0644 - photosystem II P680 chlorophyll A apoprotein 617 45.45 -2 656014..656112 + 32 86605359 psbT CYA_0645 - photosystem II reaction center protein PsbT 618 59.56 0 656510..656917 + 135 86605360 - CYA_0647 - response regulator 619 64.01 0 656914..657591 - 225 86605361 purQ CYA_0646 - phosphoribosylformylglycinamidine synthase I 620 58.14 0 657644..657901 - 85 86605362 purS CYA_0648 - phosphoribosylformylglycinamidine synthase, PurS protein 621 56.07 0 657961..658734 + 257 86605363 - CYA_0649 - putative pilus biogenesis protein 622 64.61 0 658781..659509 + 242 86605364 comB CYA_0651 - 2-phosphosulfolactate phosphatase 623 56.34 0 659506..659844 - 112 86605365 - CYA_0650 - hypothetical protein 624 62.87 0 659997..661103 + 368 86605366 argC CYA_0652 - N-acetyl-gamma-glutamyl-phosphate reductase 625 61.85 0 661037..662572 + 511 86605367 - CYA_0653 - hypothetical protein 626 66.20 +1 662803..663885 + 360 86605368 - CYA_0654 - putative tocopherol cyclase 627 62.10 0 664229..666703 + 824 86605369 clpC CYA_0656 - Clp protease, ATP-binding subunit ClpC 628 56.56 0 666852..667484 + 210 86605370 - CYA_0657 - ATP-dependent Clp protease-like protein 629 54.30 -1 667502..668083 + 193 86605371 - CYA_0658 - hypothetical protein 630 58.50 0 668111..668722 + 203 86605372 clpP CYA_0659 - ATP-dependent Clp protease proteolytic subunit 631 59.10 0 668842..669264 + 140 86605373 - CYA_0660 - hypothetical protein 632 57.84 0 669298..669954 - 218 86605374 - CYA_0661 - hypothetical protein 633 61.79 0 670060..671454 + 464 86605375 - CYA_0662 - malate dehydrogenase (oxaloacetate-decarboxylating) 634 61.90 0 671834..672505 + 223 86605376 - CYA_0664 - hypothetical protein 635 63.24 0 672502..674634 - 710 86605377 - CYA_0663 - ICE-like protease 636 60.61 0 675283..676173 - 296 86605378 - CYA_0665 - CAAX amino terminal protease family protein 637 58.93 0 676304..677014 - 236 86605379 - CYA_0666 - hypothetical protein 638 62.03 0 677064..678011 - 315 86605380 - CYA_0667 - nucleotidyl transferase family protein 639 62.67 0 678143..679594 - 483 86605381 zds CYA_0668 - carotene 7,8-desaturase 640 47.62 -2 679605..679709 - 34 86605382 - CYA_0669 - hypothetical protein 641 61.36 0 679854..680588 - 244 86605383 - CYA_0671 - D-alanyl-D-alanine carboxypeptidase 642 55.71 -1 680628..681065 - 145 86605384 - CYA_0672 - anti-oxidant AhpCTSA family protein 643 64.10 0 681136..681759 - 207 86605385 - CYA_0673 - HD domain-containing protein 644 57.83 0 683434..684870 + 478 86605387 mgtE-1 CYA_0675 - magnesium transporter 645 58.24 0 684900..685172 + 90 86605388 - CYA_0676 - hypothetical protein 646 59.40 0 685207..685908 + 233 86605389 - CYA_0677 - mgtC family protein 647 59.46 0 686139..686762 - 207 86605390 - CYA_0678 - hypothetical protein 648 52.03 -1 687174..687296 + 40 86605391 - CYA_0679 - hypothetical protein 649 59.45 0 687319..687720 + 133 86605392 - CYA_0680 - hypothetical protein 650 55.29 -1 688002..688256 + 84 86605393 - CYA_0682 - hypothetical protein 651 60.22 0 688253..688795 - 180 86605394 - CYA_0681 - hypothetical protein 652 55.56 -1 688930..689640 - 236 86605395 - CYA_0683 - hypothetical protein 653 58.13 0 689690..690649 - 319 86605396 - CYA_0684 - nucleotidyl transferase family protein 654 57.41 0 691106..691969 + 287 86605397 - CYA_0685 - cystine ABC transporter, cystine-binding protein 655 56.88 0 692083..692787 + 234 86605398 - CYA_0686 - cystine ABC transporter, permease protein 656 55.94 0 693323..694534 + 403 86605399 - CYA_0687 - ISSoc1, transposase 657 60.26 0 694687..696402 + 571 86605400 sdhA CYA_0688 - succinate dehydrogenase flavoprotein subunit 658 59.08 0 696542..697939 + 465 86605401 - CYA_0689 - beta alanine--pyruvate transaminase 659 56.22 0 698056..699204 - 382 86605402 - CYA_0690 - ISSoc1, transposase 660 58.00 0 699490..699639 - 49 86605403 - CYA_0691 - hypothetical protein 661 60.88 0 699774..701018 + 414 86605404 - CYA_0693 - GTP-binding domain-containing protein 662 61.40 0 701015..701869 - 284 86605405 lipA-1 CYA_0692 - lipoyl synthase 663 56.97 0 702091..702585 - 164 86605406 - CYA_0694 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0