version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 519 56.98 0 553736..553993 - 85 86605257 - CYA_0540 - hypothetical protein 520 47.92 -2 553993..554184 + 63 86605258 - CYA_0541 - hypothetical protein 521 63.51 0 554249..555292 + 347 86605259 glpX CYA_0542 - fructose 1,6-bisphosphatase II 522 61.50 0 555611..556906 + 431 86605260 hemA CYA_0543 - glutamyl-tRNA reductase 523 56.48 0 557019..557126 + 35 86605261 - CYA_0544 - hypothetical protein 524 62.05 0 557310..559127 + 605 86605262 typA CYA_0545 - GTP-binding protein TypA 525 65.05 +1 559138..561246 - 702 86605263 - CYA_0546 - hypothetical protein 526 66.06 +1 561284..562600 - 438 86605264 cinA CYA_0547 - competence/damage-inducible protein CinA 527 62.02 0 562722..563216 - 164 86605265 - CYA_0548 - acetyltransferase 528 51.99 -1 563304..563780 - 158 86605266 - CYA_0549 - ISSoc3, orfA transposase 529 65.26 +1 565110..565394 - 94 86605267 - CYA_0551 - hypothetical protein 530 64.82 +1 565575..566657 + 360 86605268 - CYA_0553 - CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 531 60.43 0 566654..567022 - 122 86605269 - CYA_0552 - putative lipoprotein 532 62.70 0 567087..569000 - 637 86605270 - CYA_0554 - OMP85 family membrane protein 533 62.93 0 569380..569727 - 115 86605271 - CYA_0555 - hypothetical protein 534 61.76 0 570008..570109 + 33 86605272 - CYA_0557 - hypothetical protein 535 60.45 0 570096..570899 - 267 86605273 cysE CYA_0556 - serine O-acetyltransferase 536 55.26 -1 571083..571424 + 113 86605274 - CYA_0558 - glutaredoxin-like protein 537 60.28 0 571433..571714 + 93 86605275 bolA CYA_0559 - BolA protein 538 53.28 -1 572078..572428 + 116 86605276 - CYA_0560 - hypothetical protein 539 62.72 0 572482..575142 - 886 86605277 topA CYA_0561 - DNA topoisomerase I 540 59.05 0 575343..575762 + 139 86605278 - CYA_0562 - glyoxalase family protein 541 63.92 0 575990..578068 - 692 86605279 dnaX CYA_0563 - DNA polymerase III, subunits gamma and tau 542 62.01 0 578157..578693 - 178 86605280 - CYA_0564 - hypothetical protein 543 65.95 +1 578722..579414 - 230 86605281 coaE CYA_0565 - dephospho-CoA kinase 544 63.25 0 579514..581181 - 555 86605282 - CYA_0566 - alpha-isopropylmalate/homocitrate synthase family transferase 545 59.95 0 581171..581542 - 123 86605283 - CYA_0567 - hypothetical protein 546 64.61 0 581831..582655 + 274 86605284 - CYA_0568 - PP-loop family protein 547 63.00 0 582703..584529 + 608 86605285 - CYA_0569 - hypothetical protein 548 56.38 0 584810..585091 + 93 86605286 - CYA_0570 - hypothetical protein 549 67.73 +1 585116..585490 - 124 86605287 - CYA_0571 - putative lipoprotein 550 57.86 0 585522..586202 - 226 86605288 - CYA_0572 - hypothetical protein 551 60.96 0 586289..586831 - 180 86605289 - CYA_0573 - hypothetical protein 552 57.95 0 587313..587771 + 152 86605290 - CYA_0574 - S-adenosylmethionine decarboxylase proenzyme 553 62.83 0 587800..588738 + 312 86605291 speE CYA_0575 - spermidine synthase 554 58.94 0 588838..589989 + 383 86605292 - CYA_0577 - putative UDP-sulfoquinovose synthase 555 63.71 0 589986..590897 - 303 86605293 - CYA_0576 - histone deacetylase family protein 556 52.96 -1 590947..591267 - 106 86605294 - CYA_0578 - hypothetical protein 557 52.05 -1 591438..591608 - 56 86605295 - CYA_0579 - hypothetical protein 558 52.21 -1 591848..592186 - 112 86605296 - CYA_0580 - iojap protein 559 57.94 0 592232..592873 - 213 86605297 - CYA_0581 - HD domain-containing protein 560 58.22 0 592866..594677 - 603 86605298 lepA CYA_0582 - GTP-binding protein LepA 561 50.48 -2 594944..595468 - 174 86605299 - CYA_0583 - hypothetical protein 562 59.68 0 595616..596602 - 328 86605300 glyQ CYA_0584 - glycyl-tRNA synthetase subunit alpha 563 58.24 0 596648..597418 - 256 86605301 - CYA_0585 - T1 family peptidase 564 63.76 0 597478..598887 - 469 86605302 - CYA_0586 - GTP-binding domain-containing protein 565 60.35 0 599119..599403 + 94 86605303 - CYA_0587 - hypothetical protein 566 63.76 0 599457..600041 + 194 86605304 - CYA_0588 - WD-40-like beta propeller repeat-containing protein 567 63.29 0 600076..601260 + 394 86605305 - CYA_0589 - succinyldiaminopimelate transaminase 568 58.20 0 601421..602164 + 247 86605306 - CYA_0590 - hypothetical protein 569 65.60 +1 602408..603721 + 437 86605307 hisD CYA_0591 - histidinol dehydrogenase 570 63.29 0 603885..604595 + 236 86605308 - CYA_0592 - hypothetical protein 571 61.76 0 604692..604997 + 101 86605309 - CYA_0593 - hypothetical protein 572 65.74 +1 605022..606212 + 396 86605310 - CYA_0594 - TPR repeat-containing protein 573 53.24 -1 606572..607189 + 205 86605311 - CYA_0595 - ISSoc2, resolvase 574 55.25 -1 607044..608261 + 405 86605312 - CYA_0596 - ISSoc2, transposase 575 56.00 0 608382..609281 + 299 86605313 - CYA_0597 - RNA polymerase sigma factor SigF 576 54.09 -1 609477..610247 - 256 86605314 - CYA_0598 - hypothetical protein 577 59.18 0 610837..611103 + 88 86605316 - CYA_0600 - hypothetical protein 578 59.94 0 611850..613559 + 569 86605319 ureC CYA_0603 - urease subunit alpha 579 56.89 0 613567..614016 + 149 86605320 ureE CYA_0604 - urease accessory protein UreE 580 58.56 0 614023..614676 + 217 86605321 ureF CYA_0605 - urease accessory protein UreF 581 59.11 0 614688..615296 + 202 86605322 ureG CYA_0606 - urease accessory protein UreG 582 55.93 0 615313..616104 + 263 86605323 - CYA_0607 - putative urease accessory protein UreD 583 59.56 0 617290..617655 + 121 86605324 - CYA_0609 - hypothetical protein 584 62.87 0 618095..619252 + 385 86605325 - CYA_0610 - SCP family protein 585 62.27 0 619713..621260 + 515 86605327 nirA CYA_0612 - ferredoxin-nitrite reductase 586 59.94 0 621322..622644 + 440 86605328 nrtA CYA_0613 - nitrate ABC transporter, nitrate-binding protein NrtA 587 55.21 -1 622778..623737 + 319 86605329 ntrB-1 CYA_0614 - nitrate ABC transporter, permease protein NrtB 588 59.89 0 623810..625801 + 663 86605330 ntrC-1 CYA_0615 - nitrate ABC transporter, ATP-binding protein NtrC 589 52.91 -1 625840..626682 + 280 86605331 ntrD-1 CYA_0616 - nitrate ABC transporter, ATP-binding protein NtrD 590 50.84 -2 626716..627132 + 138 86605332 - CYA_0618 - hypothetical protein 591 41.67 -2 627118..627213 - 31 86605333 - CYA_0617 - hypothetical protein 592 56.37 0 627358..629493 + 711 86605334 narB CYA_0619 - nitrate reductase 593 51.63 -1 629518..630009 + 163 86605335 - CYA_0621 - hypothetical protein 594 55.86 0 629981..631174 - 397 86605336 - CYA_0620 - ISSoc1, transposase 595 63.66 0 631635..632930 - 431 86605337 purD CYA_0622 - phosphoribosylamine--glycine ligase 596 67.82 +1 633056..634186 - 376 86605338 - CYA_0623 - glycosyl transferase, group 2 family protein 597 62.25 0 634313..635602 - 429 86605339 - CYA_0624 - HD domain-containing protein 598 66.67 +1 635727..636782 + 351 86605340 - CYA_0625 - GDSL-like lipase/acylhydrolase domain-containing protein 599 60.94 0 636800..638650 - 616 86605341 - CYA_0626 - metallo-beta-lactamase family protein 600 55.81 0 638904..639824 - 306 86605342 dapA CYA_0627 - dihydrodipicolinate synthase 601 62.36 0 640132..640758 + 208 86605343 - CYA_0628 - nitroreductase family protein 602 63.86 0 641898..642929 - 343 86605344 trpD CYA_0630 - anthranilate phosphoribosyltransferase 603 64.67 +1 642959..643759 - 266 86605345 - CYA_0631 - hypothetical protein 604 62.75 0 643786..644448 - 220 86605346 purN CYA_0632 - phosphoribosylglycinamide formyltransferase 605 61.36 0 645187..645657 + 156 86605347 - CYA_0633 - hypothetical protein 606 59.07 0 645674..646252 + 192 86605348 aat CYA_0634 - leucyl/phenylalanyl-tRNA--protein transferase 607 57.92 0 646344..646526 + 60 86605349 - CYA_0635 - hypothetical protein 608 60.05 0 646673..647806 + 377 86605350 sasA CYA_0637 - adaptive-response sensory kinase 609 55.29 -1 647772..648272 - 166 86605351 - CYA_0636 - fasciclin domain-containing protein 610 55.61 -1 648407..649717 - 436 86605352 - CYA_0638 - CO2 hydration protein 611 59.93 0 649763..651292 - 509 86605353 - CYA_0639 - NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein 612 62.20 0 651333..653168 - 611 86605354 - CYA_0640 - NAD(P)H-quinone oxidoreductase subunit F 613 60.49 0 653300..653461 - 53 86605355 - CYA_0641 - hypothetical protein 614 51.85 -1 653521..653628 - 35 86605356 psbM CYA_0642 - photosystem II reaction center protein M 615 58.25 0 653709..654005 - 98 86605357 - CYA_0643 - iron-sulfur cluster-binding protein 616 60.53 0 654368..655900 + 510 86605358 psbB CYA_0644 - photosystem II P680 chlorophyll A apoprotein 617 45.45 -2 656014..656112 + 32 86605359 psbT CYA_0645 - photosystem II reaction center protein PsbT 618 59.56 0 656510..656917 + 135 86605360 - CYA_0647 - response regulator 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0