version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 466 64.66 +1 501723..502670 - 315 86605202 - CYA_0484 - NAD-dependent epimerase/dehydratase family protein 467 65.12 +1 502667..504085 - 472 86605203 - CYA_0485 - UDP-glucose dehydrogenase 468 63.06 0 504227..505141 + 304 86605204 - CYA_0486 - cation transporter 469 58.19 0 505488..505664 + 58 86605205 - CYA_0487 - hypothetical protein 470 60.71 0 505954..506490 + 178 86605206 - CYA_0488 - HNH endonuclease domain-containing protein 471 62.61 0 506500..507435 - 311 86605207 - CYA_0489 - alpha/beta fold family hydrolase 472 63.41 0 507552..508166 + 204 86605208 ruvA CYA_0490 - Holliday junction DNA helicase motor protein 473 64.74 +1 508163..508786 + 207 86605209 nadD CYA_0491 - nicotinate (nicotinamide) nucleotide adenylyltransferase 474 59.44 0 508947..509195 - 82 86605210 psaC CYA_0492 - photosystem I subunit VII 475 59.79 0 509434..509811 + 125 86605211 - CYA_0493 - hypothetical protein 476 63.47 0 509831..510205 - 124 86605212 - CYA_0494 - hypothetical protein 477 61.53 0 510208..510849 - 213 86605213 - CYA_0495 - hypothetical protein 478 61.90 0 510982..512283 - 433 86605214 - CYA_0496 - putative gamma-glutamyl phosphate reductase 479 58.94 0 512401..512853 - 150 86605215 - CYA_0497 - hypothetical protein 480 56.42 0 512911..514188 - 425 86605216 - CYA_0498 - hypothetical protein 481 54.93 -1 514185..515624 - 479 86605217 - CYA_0499 - hypothetical protein 482 64.14 0 515750..516856 + 368 86605218 - CYA_0500 - putative glutamate--cysteine ligase 483 64.49 0 518175..519785 - 536 86605219 - CYA_0502 - transporter, monovalent cation:proton antiporter-2 (CPA2) family/universal stress family protein 484 60.71 0 520081..520668 - 195 86605220 - CYA_0503 - hypothetical protein 485 62.21 0 520709..521404 - 231 86605221 hisIE CYA_0504 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 486 63.50 0 521665..523812 - 715 86605222 - CYA_0505 - polysaccharide deacetylase family protein 487 56.30 0 524217..524708 - 163 86605223 - CYA_0506 - putative phycobilisome linker polypeptide, phycocyanin-associated, rod 488 62.36 0 524898..525431 + 177 86605224 - CYA_0507 - hypothetical protein 489 65.44 +1 527198..529402 + 734 86605227 - CYA_0510 - CobN/magnesium chelatase domain-containing protein 490 60.00 0 529494..529808 - 104 86605228 - CYA_0511 - putative RNA-binding protein 491 63.38 0 530063..532801 - 912 86605229 valS CYA_0512 - valyl-tRNA synthetase 492 53.43 -1 532955..533377 + 140 86605230 - CYA_0513 - MerR family transcriptional regulator 493 49.69 -2 533412..533570 + 52 86605231 - CYA_0514 - putative lipoprotein 494 52.42 -1 533422..533835 + 137 86605232 - CYA_0515 - hypothetical protein 495 58.39 0 533975..534796 - 273 86605233 cdsA CYA_0516 - phosphatidate cytidylyltransferase 496 61.40 0 534777..534947 - 56 86605234 - CYA_0517 - hypothetical protein 497 54.17 -1 534953..535072 + 39 86605235 - CYA_0518 - hypothetical protein 498 60.48 0 535116..536117 + 333 86605236 - CYA_0519 - dehydrogenase E1 component, alpha subunit 499 60.28 0 536338..537918 + 526 86605237 - CYA_0520 - NAD(P)H-quinone oxidoreductase subunit 4 500 53.33 -1 538113..538292 - 59 86605238 - CYA_0521 - hypothetical protein 501 64.35 0 538610..539299 - 229 86605239 - CYA_0522 - V4R domain-containing protein 502 57.29 0 539316..539795 - 159 86605240 - CYA_0523 - putative phycobilisome protein 503 58.48 0 539818..540696 - 292 86605241 - CYA_0524 - putative phycobilisome protein 504 58.48 0 540751..541434 - 227 86605242 bchJ CYA_0525 - putative bacteriochlorophyll 4-vinyl reductase 505 61.11 0 541607..542092 - 161 86605243 - CYA_0526 - iron-sulfur cluster-binding protein 506 62.59 0 542537..543100 + 187 86605244 - CYA_0528 - putative phycobilisome linker polypeptide 507 64.38 0 543064..544068 - 334 86605245 - CYA_0527 - taurine ABC transporter periplasmic substrate-binding protein 508 67.40 +1 544262..545764 + 500 86605246 cobA/hemD CYA_0529 - uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 509 63.88 0 545801..546625 + 274 86605247 menB CYA_0530 - naphthoate synthase 510 56.40 0 546670..549456 + 928 86605248 polA CYA_0531 - DNA polymerase I 511 61.30 0 549522..549782 + 86 86605249 grxC CYA_0532 - glutaredoxin 3 512 60.61 0 549834..550130 - 98 86605250 - CYA_0533 - hypothetical protein 513 61.55 0 550279..550806 - 175 86605251 - CYA_0534 - UbiE/COQ5 family methlytransferase 514 64.07 0 550816..551700 - 294 86605252 - CYA_0535 - arginase family protein 515 58.59 0 551962..552357 + 131 86605253 psaD CYA_0536 - photosystem I reaction center subunit II 516 60.26 0 552727..553335 - 202 86605254 - CYA_0537 - anti-oxidant AhpCTSA family protein 517 56.19 0 553397..553501 + 34 86605255 - CYA_0538 - hypothetical protein 518 64.14 0 553498..553734 + 78 86605256 - CYA_0539 - hypothetical protein 519 56.98 0 553736..553993 - 85 86605257 - CYA_0540 - hypothetical protein 520 47.92 -2 553993..554184 + 63 86605258 - CYA_0541 - hypothetical protein 521 63.51 0 554249..555292 + 347 86605259 glpX CYA_0542 - fructose 1,6-bisphosphatase II 522 61.50 0 555611..556906 + 431 86605260 hemA CYA_0543 - glutamyl-tRNA reductase 523 56.48 0 557019..557126 + 35 86605261 - CYA_0544 - hypothetical protein 524 62.05 0 557310..559127 + 605 86605262 typA CYA_0545 - GTP-binding protein TypA 525 65.05 +1 559138..561246 - 702 86605263 - CYA_0546 - hypothetical protein 526 66.06 +1 561284..562600 - 438 86605264 cinA CYA_0547 - competence/damage-inducible protein CinA 527 62.02 0 562722..563216 - 164 86605265 - CYA_0548 - acetyltransferase 528 51.99 -1 563304..563780 - 158 86605266 - CYA_0549 - ISSoc3, orfA transposase 529 65.26 +1 565110..565394 - 94 86605267 - CYA_0551 - hypothetical protein 530 64.82 +1 565575..566657 + 360 86605268 - CYA_0553 - CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 531 60.43 0 566654..567022 - 122 86605269 - CYA_0552 - putative lipoprotein 532 62.70 0 567087..569000 - 637 86605270 - CYA_0554 - OMP85 family membrane protein 533 62.93 0 569380..569727 - 115 86605271 - CYA_0555 - hypothetical protein 534 61.76 0 570008..570109 + 33 86605272 - CYA_0557 - hypothetical protein 535 60.45 0 570096..570899 - 267 86605273 cysE CYA_0556 - serine O-acetyltransferase 536 55.26 -1 571083..571424 + 113 86605274 - CYA_0558 - glutaredoxin-like protein 537 60.28 0 571433..571714 + 93 86605275 bolA CYA_0559 - BolA protein 538 53.28 -1 572078..572428 + 116 86605276 - CYA_0560 - hypothetical protein 539 62.72 0 572482..575142 - 886 86605277 topA CYA_0561 - DNA topoisomerase I 540 59.05 0 575343..575762 + 139 86605278 - CYA_0562 - glyoxalase family protein 541 63.92 0 575990..578068 - 692 86605279 dnaX CYA_0563 - DNA polymerase III, subunits gamma and tau 542 62.01 0 578157..578693 - 178 86605280 - CYA_0564 - hypothetical protein 543 65.95 +1 578722..579414 - 230 86605281 coaE CYA_0565 - dephospho-CoA kinase 544 63.25 0 579514..581181 - 555 86605282 - CYA_0566 - alpha-isopropylmalate/homocitrate synthase family transferase 545 59.95 0 581171..581542 - 123 86605283 - CYA_0567 - hypothetical protein 546 64.61 0 581831..582655 + 274 86605284 - CYA_0568 - PP-loop family protein 547 63.00 0 582703..584529 + 608 86605285 - CYA_0569 - hypothetical protein 548 56.38 0 584810..585091 + 93 86605286 - CYA_0570 - hypothetical protein 549 67.73 +1 585116..585490 - 124 86605287 - CYA_0571 - putative lipoprotein 550 57.86 0 585522..586202 - 226 86605288 - CYA_0572 - hypothetical protein 551 60.96 0 586289..586831 - 180 86605289 - CYA_0573 - hypothetical protein 552 57.95 0 587313..587771 + 152 86605290 - CYA_0574 - S-adenosylmethionine decarboxylase proenzyme 553 62.83 0 587800..588738 + 312 86605291 speE CYA_0575 - spermidine synthase 554 58.94 0 588838..589989 + 383 86605292 - CYA_0577 - putative UDP-sulfoquinovose synthase 555 63.71 0 589986..590897 - 303 86605293 - CYA_0576 - histone deacetylase family protein 556 52.96 -1 590947..591267 - 106 86605294 - CYA_0578 - hypothetical protein 557 52.05 -1 591438..591608 - 56 86605295 - CYA_0579 - hypothetical protein 558 52.21 -1 591848..592186 - 112 86605296 - CYA_0580 - iojap protein 559 57.94 0 592232..592873 - 213 86605297 - CYA_0581 - HD domain-containing protein 560 58.22 0 592866..594677 - 603 86605298 lepA CYA_0582 - GTP-binding protein LepA 561 50.48 -2 594944..595468 - 174 86605299 - CYA_0583 - hypothetical protein 562 59.68 0 595616..596602 - 328 86605300 glyQ CYA_0584 - glycyl-tRNA synthetase subunit alpha 563 58.24 0 596648..597418 - 256 86605301 - CYA_0585 - T1 family peptidase 564 63.76 0 597478..598887 - 469 86605302 - CYA_0586 - GTP-binding domain-containing protein 565 60.35 0 599119..599403 + 94 86605303 - CYA_0587 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0