version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 430 63.09 0 465509..467716 + 735 86605166 - CYA_0447 - D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein 431 44.67 -2 467763..469085 + 440 86605167 - CYA_0448 - CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 432 53.49 -1 469078..469722 + 214 86605168 - CYA_0449 - hypothetical protein 433 61.72 0 469759..470304 - 181 86605169 - CYA_0450 - hypothetical protein 434 56.20 0 470548..470958 - 136 86605170 - CYA_0452 - hypothetical protein 435 59.57 0 470890..471030 + 46 86605171 - CYA_0453 - hypothetical protein 436 64.53 0 471065..471580 - 171 86605172 - CYA_0454 - hypothetical protein 437 50.72 -2 471577..471714 - 45 86605173 - CYA_0455 - hypothetical protein 438 60.97 0 471902..472375 + 157 86605174 - CYA_0456 - hypothetical protein 439 62.35 0 472535..473902 + 455 86605175 nusA CYA_0457 - transcription elongation factor NusA 440 64.51 0 473958..474605 + 215 86605176 - CYA_0458 - aromatic acid decarboxylase 441 61.25 0 474747..475817 - 356 86605177 - CYA_0459 - alpha/beta fold family hydrolase 442 51.67 -1 476202..476321 + 39 86605178 - CYA_0460 - hypothetical protein 443 66.83 +1 476311..476940 + 209 86605179 cobH-1 CYA_0461 - precorrin-8X methylmutase 444 62.84 0 476947..477861 + 304 86605180 - CYA_0462 - hypothetical protein 445 64.68 +1 477862..479121 + 419 86605181 cbiE/cbiT CYA_0463 - precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE/T subunits 446 58.79 0 479156..479752 - 198 86605182 - CYA_0464 - hypothetical protein 447 62.64 0 479943..480662 + 239 86605183 sfsA CYA_0465 - sugar fermentation stimulation protein 448 61.07 0 480687..481472 + 261 86605184 xth CYA_0466 - exodeoxyribonuclease III 449 61.04 0 481554..482228 + 224 86605185 msrA CYA_0467 - methionine-S-sulfoxide reductase 450 59.64 0 482242..483081 - 279 86605186 cysW CYA_0468 - sulfate ABC transporter, permease protein CysW 451 59.66 0 483071..483883 - 270 86605187 cysT CYA_0469 - sulfate ABC transporter, permease protein CysT 452 62.07 0 483890..484933 - 347 86605188 cysA CYA_0470 - sulfate transport system ATP-binding protein 453 64.22 0 485108..486127 - 339 86605189 sbp CYA_0471 - sulfate ABC transporter, sulfate-binding protein 454 64.63 0 486236..489031 - 931 86605190 - CYA_0472 - acetyltransferase 455 60.13 0 489057..491687 - 876 86605191 adhE CYA_0473 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 456 54.50 -1 491778..492188 - 136 86605192 - CYA_0474 - OsmC family protein 457 58.43 0 492370..493122 - 250 86605193 pflA CYA_0475 - pyruvate formate-lyase activating enzyme 458 61.64 0 493284..493661 - 125 86605194 - CYA_0476 - pentapeptide repeat-containing protein 459 61.21 0 493749..496055 - 768 86605195 pflB CYA_0477 - formate acetyltransferase 460 64.96 +1 496453..497505 + 350 86605196 - CYA_0478 - putative 4-hydroxyphenylpyruvate dioxygenase 461 54.64 -1 497587..497952 - 121 86605197 - CYA_0479 - response regulator 462 62.38 0 498264..499196 - 310 86605198 - CYA_0480 - NAD-dependent glycerol-3-phosphate dehydrogenase family protein 463 60.38 0 499316..500221 + 301 86605199 - CYA_0481 - alpha/beta fold family hydrolase 464 58.46 0 500300..500689 + 129 86605200 gcvH CYA_0482 - glycine cleavage system protein H 465 60.31 0 500693..501478 - 261 86605201 - CYA_0483 - GGDEF/FHA domain-containing protein 466 64.66 +1 501723..502670 - 315 86605202 - CYA_0484 - NAD-dependent epimerase/dehydratase family protein 467 65.12 +1 502667..504085 - 472 86605203 - CYA_0485 - UDP-glucose dehydrogenase 468 63.06 0 504227..505141 + 304 86605204 - CYA_0486 - cation transporter 469 58.19 0 505488..505664 + 58 86605205 - CYA_0487 - hypothetical protein 470 60.71 0 505954..506490 + 178 86605206 - CYA_0488 - HNH endonuclease domain-containing protein 471 62.61 0 506500..507435 - 311 86605207 - CYA_0489 - alpha/beta fold family hydrolase 472 63.41 0 507552..508166 + 204 86605208 ruvA CYA_0490 - Holliday junction DNA helicase motor protein 473 64.74 +1 508163..508786 + 207 86605209 nadD CYA_0491 - nicotinate (nicotinamide) nucleotide adenylyltransferase 474 59.44 0 508947..509195 - 82 86605210 psaC CYA_0492 - photosystem I subunit VII 475 59.79 0 509434..509811 + 125 86605211 - CYA_0493 - hypothetical protein 476 63.47 0 509831..510205 - 124 86605212 - CYA_0494 - hypothetical protein 477 61.53 0 510208..510849 - 213 86605213 - CYA_0495 - hypothetical protein 478 61.90 0 510982..512283 - 433 86605214 - CYA_0496 - putative gamma-glutamyl phosphate reductase 479 58.94 0 512401..512853 - 150 86605215 - CYA_0497 - hypothetical protein 480 56.42 0 512911..514188 - 425 86605216 - CYA_0498 - hypothetical protein 481 54.93 -1 514185..515624 - 479 86605217 - CYA_0499 - hypothetical protein 482 64.14 0 515750..516856 + 368 86605218 - CYA_0500 - putative glutamate--cysteine ligase 483 64.49 0 518175..519785 - 536 86605219 - CYA_0502 - transporter, monovalent cation:proton antiporter-2 (CPA2) family/universal stress family protein 484 60.71 0 520081..520668 - 195 86605220 - CYA_0503 - hypothetical protein 485 62.21 0 520709..521404 - 231 86605221 hisIE CYA_0504 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 486 63.50 0 521665..523812 - 715 86605222 - CYA_0505 - polysaccharide deacetylase family protein 487 56.30 0 524217..524708 - 163 86605223 - CYA_0506 - putative phycobilisome linker polypeptide, phycocyanin-associated, rod 488 62.36 0 524898..525431 + 177 86605224 - CYA_0507 - hypothetical protein 489 65.44 +1 527198..529402 + 734 86605227 - CYA_0510 - CobN/magnesium chelatase domain-containing protein 490 60.00 0 529494..529808 - 104 86605228 - CYA_0511 - putative RNA-binding protein 491 63.38 0 530063..532801 - 912 86605229 valS CYA_0512 - valyl-tRNA synthetase 492 53.43 -1 532955..533377 + 140 86605230 - CYA_0513 - MerR family transcriptional regulator 493 49.69 -2 533412..533570 + 52 86605231 - CYA_0514 - putative lipoprotein 494 52.42 -1 533422..533835 + 137 86605232 - CYA_0515 - hypothetical protein 495 58.39 0 533975..534796 - 273 86605233 cdsA CYA_0516 - phosphatidate cytidylyltransferase 496 61.40 0 534777..534947 - 56 86605234 - CYA_0517 - hypothetical protein 497 54.17 -1 534953..535072 + 39 86605235 - CYA_0518 - hypothetical protein 498 60.48 0 535116..536117 + 333 86605236 - CYA_0519 - dehydrogenase E1 component, alpha subunit 499 60.28 0 536338..537918 + 526 86605237 - CYA_0520 - NAD(P)H-quinone oxidoreductase subunit 4 500 53.33 -1 538113..538292 - 59 86605238 - CYA_0521 - hypothetical protein 501 64.35 0 538610..539299 - 229 86605239 - CYA_0522 - V4R domain-containing protein 502 57.29 0 539316..539795 - 159 86605240 - CYA_0523 - putative phycobilisome protein 503 58.48 0 539818..540696 - 292 86605241 - CYA_0524 - putative phycobilisome protein 504 58.48 0 540751..541434 - 227 86605242 bchJ CYA_0525 - putative bacteriochlorophyll 4-vinyl reductase 505 61.11 0 541607..542092 - 161 86605243 - CYA_0526 - iron-sulfur cluster-binding protein 506 62.59 0 542537..543100 + 187 86605244 - CYA_0528 - putative phycobilisome linker polypeptide 507 64.38 0 543064..544068 - 334 86605245 - CYA_0527 - taurine ABC transporter periplasmic substrate-binding protein 508 67.40 +1 544262..545764 + 500 86605246 cobA/hemD CYA_0529 - uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 509 63.88 0 545801..546625 + 274 86605247 menB CYA_0530 - naphthoate synthase 510 56.40 0 546670..549456 + 928 86605248 polA CYA_0531 - DNA polymerase I 511 61.30 0 549522..549782 + 86 86605249 grxC CYA_0532 - glutaredoxin 3 512 60.61 0 549834..550130 - 98 86605250 - CYA_0533 - hypothetical protein 513 61.55 0 550279..550806 - 175 86605251 - CYA_0534 - UbiE/COQ5 family methlytransferase 514 64.07 0 550816..551700 - 294 86605252 - CYA_0535 - arginase family protein 515 58.59 0 551962..552357 + 131 86605253 psaD CYA_0536 - photosystem I reaction center subunit II 516 60.26 0 552727..553335 - 202 86605254 - CYA_0537 - anti-oxidant AhpCTSA family protein 517 56.19 0 553397..553501 + 34 86605255 - CYA_0538 - hypothetical protein 518 64.14 0 553498..553734 + 78 86605256 - CYA_0539 - hypothetical protein 519 56.98 0 553736..553993 - 85 86605257 - CYA_0540 - hypothetical protein 520 47.92 -2 553993..554184 + 63 86605258 - CYA_0541 - hypothetical protein 521 63.51 0 554249..555292 + 347 86605259 glpX CYA_0542 - fructose 1,6-bisphosphatase II 522 61.50 0 555611..556906 + 431 86605260 hemA CYA_0543 - glutamyl-tRNA reductase 523 56.48 0 557019..557126 + 35 86605261 - CYA_0544 - hypothetical protein 524 62.05 0 557310..559127 + 605 86605262 typA CYA_0545 - GTP-binding protein TypA 525 65.05 +1 559138..561246 - 702 86605263 - CYA_0546 - hypothetical protein 526 66.06 +1 561284..562600 - 438 86605264 cinA CYA_0547 - competence/damage-inducible protein CinA 527 62.02 0 562722..563216 - 164 86605265 - CYA_0548 - acetyltransferase 528 51.99 -1 563304..563780 - 158 86605266 - CYA_0549 - ISSoc3, orfA transposase 529 65.26 +1 565110..565394 - 94 86605267 - CYA_0551 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0