version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2595 51.43 -1 2749921..2750025 + 34 86607337 - CYA_2733 - hypothetical protein 2596 63.62 0 2750055..2750906 + 283 86607338 - CYA_2734 - electron transfer flavoprotein, beta subunit/FixA family protein 2597 64.16 0 2751044..2752162 + 372 86607339 - CYA_2735 - electron transfer flavoprotein, alpha subunit/FixB family protein 2598 61.75 0 2752181..2752465 - 94 86607340 - CYA_2736 - hypothetical protein 2599 58.79 0 2752755..2753897 + 380 86607341 - CYA_2737 - response regulator 2600 51.94 -1 2754125..2754511 + 128 86607342 - CYA_2738 - response regulator 2601 56.56 0 2754508..2754873 + 121 86607343 - CYA_2739 - response regulator 2602 59.35 0 2755039..2755503 + 154 86607344 cheW CYA_2740 - chemotaxis protein cheW 2603 62.51 0 2755812..2758262 + 816 86607345 - CYA_2741 - putative methyl-accepting chemotaxis protein 2604 63.28 0 2758450..2763711 + 1753 86607346 - CYA_2742 - sensor histidine kinase/response regulator 2605 59.22 0 2763846..2764490 + 214 86607347 - CYA_2743 - hypothetical protein 2606 63.02 0 2764603..2766219 + 538 86607348 lnt CYA_2744 - apolipoprotein N-acyltransferase 2607 62.21 0 2766533..2767138 + 201 86607349 cbiT CYA_2746 - precorrin-6B methylase 2608 56.86 0 2767286..2767540 + 84 86607350 - CYA_2747 - hypothetical protein 2609 58.68 0 2767600..2767962 - 120 86607351 - CYA_2748 - RlpA family protein, truncation 2610 57.94 0 2768582..2768833 + 83 86607352 - CYA_2750 - ferredoxin-thioredoxin reductase, variable subunit 2611 58.86 0 2768830..2769303 - 157 86607353 - CYA_2749 - hypothetical protein 2612 62.13 0 2769533..2771449 + 638 86607354 hflB CYA_2751 - cell division protein FtsH 2613 60.96 0 2771629..2773785 - 718 86607355 - CYA_2752 - putative alpha-glucan phosphorylase 2614 64.67 +1 2774241..2775344 - 367 86607356 - CYA_2753 - SpoIID/LytB domain-containing protein 2615 68.95 +1 2775738..2776262 - 174 86607357 - CYA_2754 - cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein 2616 62.61 0 2776450..2777682 + 410 86607358 - CYA_2755 - S1C family peptidase 2617 63.01 0 2778001..2779584 + 527 86607359 - CYA_2756 - protein kinase 2618 53.17 -1 2779652..2780014 - 120 86607360 - CYA_2757 - hypothetical protein 2619 62.04 0 2781031..2782305 - 424 86607361 - CYA_2758 - oxidoreductase, FAD-dependent 2620 62.70 0 2782776..2785574 + 932 86607362 - CYA_2759 - cation transport ATPase 2621 63.76 0 2785628..2786557 - 309 86607363 - CYA_2760 - NAD-dependent epimerase/dehydratase family protein 2622 64.17 0 2786900..2787499 + 199 86607364 - CYA_2761 - hypothetical protein 2623 61.90 0 2787500..2788486 - 328 86607365 hemB CYA_2762 - delta-aminolevulinic acid dehydratase 2624 56.91 0 2789589..2789711 + 40 86607367 - CYA_2764 - hypothetical protein 2625 47.01 -2 2789830..2789946 + 38 86607368 psbI CYA_2765 - photosystem II reaction center I protein I 2626 58.50 0 2790058..2790498 - 146 86607369 - CYA_2766 - putative lipoprotein 2627 50.00 -2 2790553..2790654 + 33 86607370 - CYA_2768 - hypothetical protein 2628 62.09 0 2790651..2791283 - 210 86607371 - CYA_2767 - BioY family protein 2629 63.27 0 2791340..2792134 + 264 86607372 - CYA_2769 - inositol monophosphatase family protein 2630 57.52 0 2792561..2793019 - 152 86607373 - CYA_2771 - hypothetical protein 2631 61.68 0 2793174..2795138 + 654 86607374 - CYA_2773 - sensor histidine kinase 2632 62.26 0 2795117..2795275 - 52 86607375 - CYA_2772 - hypothetical protein 2633 60.14 0 2795279..2795845 - 188 86607376 - CYA_2774 - putative cyclase/dehydrase 2634 63.01 0 2795942..2796187 - 81 86607377 - CYA_2775 - hypothetical protein 2635 55.56 -1 2796321..2796410 + 29 86607378 petN CYA_2776 - cytochrome b6-f complex, subunit VIII 2636 61.38 0 2796426..2796614 + 62 86607379 - CYA_2777 - hypothetical protein 2637 62.34 0 2796655..2797047 - 130 86607380 - CYA_2778 - hypothetical protein 2638 64.47 0 2797035..2799542 - 835 86607381 - CYA_2779 - sensor histidine kinase 2639 64.63 +1 2799667..2800452 - 261 86607382 - CYA_2780 - TatD family hydrolase 2640 60.24 0 2800623..2801213 + 196 86607383 - CYA_2781 - hypothetical protein 2641 59.80 0 2801731..2802735 + 334 86607384 - CYA_2782 - iron ABC transporter iron-binding subunit 2642 64.03 0 2802736..2804442 + 568 86607385 - CYA_2783 - iron ABC transporter permease 2643 62.09 0 2804390..2804542 + 50 86607386 - CYA_2784 - hypothetical protein 2644 58.61 0 2804598..2805950 + 450 86607387 ugpB CYA_2785 - glycerol-3-phosphate ABC transporter, glycerol-3-phosphate binding protein 2645 57.93 0 2806202..2807254 + 350 86607388 upgA CYA_2786 - glycerol-3-phosphate ABC transporter, permease protein 2646 57.01 0 2807279..2807713 - 144 86607389 - CYA_2787 - hypothetical protein 2647 53.62 -1 2807749..2808024 - 91 86607390 rpsO CYA_2788 - ribosomal protein S15 2648 65.05 +1 2808113..2808793 + 226 86607391 - CYA_2789 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit-like protein 2649 55.14 -1 2808860..2809345 - 161 86607392 apcD CYA_2790 - allophycocyanin alpha, B subunit 2650 64.33 0 2809533..2810900 - 455 86607393 pilT-2 CYA_2791 - twitching mobility protein PilT 2651 60.72 0 2811142..2811831 - 229 86607394 folE CYA_2792 - GTP cyclohydrolase I 2652 59.23 0 2811955..2812680 - 241 86607395 - CYA_2793 - short chain dehydrogenase 2653 61.32 0 2812905..2814101 + 398 86607396 - CYA_2794 - iron ABC transporter ATP-binding protein 2654 61.63 0 2814557..2815450 + 297 86607397 - CYA_2795 - chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein 2655 64.80 +1 2815492..2816349 + 285 86607398 - CYA_2796 - HemK family methyltransferase 2656 62.26 0 2816491..2817261 + 256 86607399 - CYA_2797 - sensor histidine kinase 2657 59.70 0 2817287..2817688 - 133 86607400 - CYA_2798 - putative photosystem II protein 2658 57.88 0 2817785..2818501 + 238 86607401 - CYA_2799 - NnrU family protein 2659 58.27 0 2818536..2818928 + 130 86607402 trx-3 CYA_2801 - thioredoxin 2660 67.74 +1 2818865..2820454 - 529 86607403 - CYA_2800 - putative hydantoin utilization protein B 2661 63.75 0 2820451..2820759 - 102 86607404 - CYA_2802 - hypothetical protein 2662 59.38 0 2820791..2821531 - 246 86607405 - CYA_2803 - PDZ domain-containing protein 2663 64.98 +1 2821568..2822518 - 316 86607406 pip CYA_2804 - prolyl aminopeptidase 2664 62.45 0 2822552..2824759 - 735 86607407 - CYA_2805 - glycosy hydrolase family protein 2665 61.88 0 2824935..2825477 + 180 86607408 - CYA_2806 - HNH endonuclease domain-containing protein 2666 62.77 0 2825525..2826088 + 187 86607409 - CYA_2807 - CpeS-like protein 2667 66.67 +1 2826212..2828101 + 629 86607410 - CYA_2809 - AAA family ATPase 2668 64.35 0 2828098..2829564 - 488 86607411 glcD CYA_2808 - glycolate oxidase, subunit GlcD 2669 64.57 0 2829694..2830884 + 396 86607412 - CYA_2810 - hypothetical protein 2670 60.20 0 2831007..2831207 + 66 86607413 rpmI CYA_2811 - 50S ribosomal protein L35 2671 61.34 0 2831330..2831686 + 118 86607414 rplT CYA_2812 - 50S ribosomal protein L20 2672 66.29 +1 2831691..2832491 + 266 86607415 - CYA_2814 - amino acid transporter, amino acid-binding protein 2673 64.56 0 2832488..2834101 - 537 86607416 purH CYA_2813 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2674 60.39 0 2834360..2835076 + 238 86607417 - CYA_2815 - MotA/TolQ/ExbB family proton transporter 2675 61.03 0 2835080..2835505 + 141 86607418 - CYA_2816 - ExbD/TolR family proton transporter 2676 63.07 0 2835539..2836483 - 314 86607419 argF CYA_2817 - ornithine carbamoyltransferase 2677 61.81 0 2836589..2837884 - 431 86607420 prc-2 CYA_2818 - C-terminal processing peptidase 2678 55.38 -1 2837907..2838101 - 64 86607421 - CYA_2819 - hypothetical protein 2679 64.18 0 2838133..2839500 + 455 86607422 proA CYA_2820 - gamma-glutamyl phosphate reductase 2680 58.42 0 2839764..2840309 + 181 86607423 - CYA_2821 - putative RNA-binding protein 2681 59.87 0 2840401..2841195 + 264 86607424 - CYA_2822 - DSBA thioredoxin domain-containing protein 2682 63.36 0 2841219..2841914 + 231 86607425 - CYA_2823 - HNH endonuclease domain-containing protein 2683 67.17 +1 2841989..2843173 - 394 86607426 - CYA_2824 - sporulation and cell division repeat-containing protein 2684 64.03 0 2843283..2843699 - 138 86607427 - CYA_2825 - hypothetical protein 2685 65.00 +1 2843803..2846259 + 818 86607428 recJ-2 CYA_2826 - single-stranded-DNA-specific exonuclease RecJ 2686 63.21 0 2846282..2846947 + 221 86607429 - CYA_2827 - Ser/Thr protein phosphatase family protein 2687 65.82 +1 2846998..2847591 + 197 86607430 rdgB CYA_2828 - non-canonical purine NTP pyrophosphatase 2688 64.08 0 2847784..2848905 + 373 86607431 - CYA_2829 - hypothetical protein 2689 65.85 +1 2848921..2849535 + 204 86607432 tmk CYA_2830 - thymidylate kinase 2690 59.88 0 2849659..2850645 + 328 86607433 - CYA_2831 - CHAD domain-containing protein 2691 56.71 0 2850743..2851807 + 354 86607434 - CYA_2832 - polyamine transporter, polyamine-binding protein 2692 50.88 -2 2851881..2852051 + 56 86607435 - CYA_2834 - CAB/ELIP/HLIP family protein 2693 53.73 -1 2851884..2852084 - 66 86607436 - CYA_2833 - hypothetical protein 2694 55.00 -1 2852088..2852207 - 39 86607437 - CYA_2835 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0