version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2558 57.47 0 2706717..2708738 + 673 86607302 - CYA_2692 - FHA domain-containing protein 2559 51.88 -1 2708985..2709437 + 150 86607303 - CYA_2693 - hypothetical protein 2560 53.56 -1 2709546..2710163 + 205 86607304 - CYA_2694 - ISSoc2, resolvase 2561 56.00 0 2710018..2711283 + 421 86607305 - CYA_2695 - ISSoc2, transposase 2562 59.26 0 2711745..2712014 + 89 86607306 - CYA_2696 - hypothetical protein 2563 58.26 0 2712109..2712762 + 217 86607307 - CYA_2697 - putative guanylate kinase 2564 59.31 0 2714420..2715112 + 230 86607308 - CYA_2699 - DNA-binding response regulator 2565 61.14 0 2715285..2716424 + 379 86607309 lgt-2 CYA_2700 - prolipoprotein diacylglyceryl transferase 2566 64.10 0 2718426..2719907 - 493 86607310 - CYA_2702 - M50 family peptidase 2567 59.89 0 2719954..2721045 - 363 86607311 acsF CYA_2703 - magnesium-protoporphyrin IX monomethyl ester cyclase 2568 64.93 +1 2721145..2725752 - 1535 86607312 gltS CYA_2704 - ferredoxin-dependent glutamate synthase 2569 47.41 -2 2725833..2725967 - 44 86607313 - CYA_2705 - hypothetical protein 2570 64.18 0 2726041..2726886 - 281 86607314 - CYA_2706 - hypothetical protein 2571 59.60 0 2727113..2727310 + 65 86607315 - CYA_2707 - hypothetical protein 2572 63.04 0 2727385..2728404 + 339 86607316 - CYA_2708 - drug exporter ABC transporter ATP-binding protein 2573 46.37 -2 2728530..2728928 + 132 86607317 - CYA_2709 - ISSoc4, transposase orfA 2574 45.33 -2 2728910..2729476 + 188 86607318 - CYA_2710 - ISSoc4, transposase orfB 2575 61.40 0 2729586..2730440 + 284 86607319 - CYA_2711 - drug exporter ABC transporter permease 2576 61.57 0 2730464..2730679 - 71 86607320 - CYA_2712 - hypothetical protein 2577 58.76 0 2730798..2731442 + 214 86607321 - CYA_2713 - hypothetical protein 2578 63.25 0 2731625..2734870 - 1081 86607322 - CYA_2714 - GAF domain/histidine kinase domain-containing protein 2579 61.67 0 2734803..2736242 - 479 86607323 gltX CYA_2715 - glutamyl-tRNA synthetase 2580 62.11 0 2736469..2736819 + 116 86607324 - CYA_2716 - hypothetical protein 2581 59.58 0 2736917..2737156 + 79 86607325 - CYA_2717 - hypothetical protein 2582 61.33 0 2737203..2738195 - 330 86607326 - CYA_2718 - hypothetical protein 2583 56.38 0 2738226..2738507 - 93 86607327 - CYA_2719 - hypothetical protein 2584 47.70 -2 2739836..2740009 + 57 90296799 - CYA_2721 - ISSoc3, orfA transposase, interruption-N 2585 46.42 -2 2740043..2740447 + 134 86607328 - CYA_2722 - ISSoc4, transposase orfA 2586 52.70 -1 2741015..2741329 + 104 90296800 - CYA_2724 - ISSoc3, orfA transposase, interruption-C 2587 59.22 0 2741474..2741728 + 84 86607329 - CYA_2725 - hypothetical protein 2588 62.62 0 2741783..2742499 + 238 86607330 - CYA_2726 - putative outer membrane protein 2589 59.67 0 2742709..2744052 + 447 86607331 - CYA_2727 - response regulator 2590 57.94 0 2744120..2744623 + 167 86607332 - CYA_2728 - hypothetical protein 2591 66.44 +1 2744659..2745534 + 291 86607333 aroE CYA_2729 - shikimate 5-dehydrogenase 2592 63.72 0 2745811..2747475 + 554 86607334 - CYA_2730 - hypothetical protein 2593 50.00 -2 2747491..2747706 + 71 86607335 - CYA_2731 - hypothetical protein 2594 60.38 0 2747913..2749709 - 598 86607336 argS CYA_2732 - arginyl-tRNA synthetase 2595 51.43 -1 2749921..2750025 + 34 86607337 - CYA_2733 - hypothetical protein 2596 63.62 0 2750055..2750906 + 283 86607338 - CYA_2734 - electron transfer flavoprotein, beta subunit/FixA family protein 2597 64.16 0 2751044..2752162 + 372 86607339 - CYA_2735 - electron transfer flavoprotein, alpha subunit/FixB family protein 2598 61.75 0 2752181..2752465 - 94 86607340 - CYA_2736 - hypothetical protein 2599 58.79 0 2752755..2753897 + 380 86607341 - CYA_2737 - response regulator 2600 51.94 -1 2754125..2754511 + 128 86607342 - CYA_2738 - response regulator 2601 56.56 0 2754508..2754873 + 121 86607343 - CYA_2739 - response regulator 2602 59.35 0 2755039..2755503 + 154 86607344 cheW CYA_2740 - chemotaxis protein cheW 2603 62.51 0 2755812..2758262 + 816 86607345 - CYA_2741 - putative methyl-accepting chemotaxis protein 2604 63.28 0 2758450..2763711 + 1753 86607346 - CYA_2742 - sensor histidine kinase/response regulator 2605 59.22 0 2763846..2764490 + 214 86607347 - CYA_2743 - hypothetical protein 2606 63.02 0 2764603..2766219 + 538 86607348 lnt CYA_2744 - apolipoprotein N-acyltransferase 2607 62.21 0 2766533..2767138 + 201 86607349 cbiT CYA_2746 - precorrin-6B methylase 2608 56.86 0 2767286..2767540 + 84 86607350 - CYA_2747 - hypothetical protein 2609 58.68 0 2767600..2767962 - 120 86607351 - CYA_2748 - RlpA family protein, truncation 2610 57.94 0 2768582..2768833 + 83 86607352 - CYA_2750 - ferredoxin-thioredoxin reductase, variable subunit 2611 58.86 0 2768830..2769303 - 157 86607353 - CYA_2749 - hypothetical protein 2612 62.13 0 2769533..2771449 + 638 86607354 hflB CYA_2751 - cell division protein FtsH 2613 60.96 0 2771629..2773785 - 718 86607355 - CYA_2752 - putative alpha-glucan phosphorylase 2614 64.67 +1 2774241..2775344 - 367 86607356 - CYA_2753 - SpoIID/LytB domain-containing protein 2615 68.95 +1 2775738..2776262 - 174 86607357 - CYA_2754 - cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein 2616 62.61 0 2776450..2777682 + 410 86607358 - CYA_2755 - S1C family peptidase 2617 63.01 0 2778001..2779584 + 527 86607359 - CYA_2756 - protein kinase 2618 53.17 -1 2779652..2780014 - 120 86607360 - CYA_2757 - hypothetical protein 2619 62.04 0 2781031..2782305 - 424 86607361 - CYA_2758 - oxidoreductase, FAD-dependent 2620 62.70 0 2782776..2785574 + 932 86607362 - CYA_2759 - cation transport ATPase 2621 63.76 0 2785628..2786557 - 309 86607363 - CYA_2760 - NAD-dependent epimerase/dehydratase family protein 2622 64.17 0 2786900..2787499 + 199 86607364 - CYA_2761 - hypothetical protein 2623 61.90 0 2787500..2788486 - 328 86607365 hemB CYA_2762 - delta-aminolevulinic acid dehydratase 2624 56.91 0 2789589..2789711 + 40 86607367 - CYA_2764 - hypothetical protein 2625 47.01 -2 2789830..2789946 + 38 86607368 psbI CYA_2765 - photosystem II reaction center I protein I 2626 58.50 0 2790058..2790498 - 146 86607369 - CYA_2766 - putative lipoprotein 2627 50.00 -2 2790553..2790654 + 33 86607370 - CYA_2768 - hypothetical protein 2628 62.09 0 2790651..2791283 - 210 86607371 - CYA_2767 - BioY family protein 2629 63.27 0 2791340..2792134 + 264 86607372 - CYA_2769 - inositol monophosphatase family protein 2630 57.52 0 2792561..2793019 - 152 86607373 - CYA_2771 - hypothetical protein 2631 61.68 0 2793174..2795138 + 654 86607374 - CYA_2773 - sensor histidine kinase 2632 62.26 0 2795117..2795275 - 52 86607375 - CYA_2772 - hypothetical protein 2633 60.14 0 2795279..2795845 - 188 86607376 - CYA_2774 - putative cyclase/dehydrase 2634 63.01 0 2795942..2796187 - 81 86607377 - CYA_2775 - hypothetical protein 2635 55.56 -1 2796321..2796410 + 29 86607378 petN CYA_2776 - cytochrome b6-f complex, subunit VIII 2636 61.38 0 2796426..2796614 + 62 86607379 - CYA_2777 - hypothetical protein 2637 62.34 0 2796655..2797047 - 130 86607380 - CYA_2778 - hypothetical protein 2638 64.47 0 2797035..2799542 - 835 86607381 - CYA_2779 - sensor histidine kinase 2639 64.63 +1 2799667..2800452 - 261 86607382 - CYA_2780 - TatD family hydrolase 2640 60.24 0 2800623..2801213 + 196 86607383 - CYA_2781 - hypothetical protein 2641 59.80 0 2801731..2802735 + 334 86607384 - CYA_2782 - iron ABC transporter iron-binding subunit 2642 64.03 0 2802736..2804442 + 568 86607385 - CYA_2783 - iron ABC transporter permease 2643 62.09 0 2804390..2804542 + 50 86607386 - CYA_2784 - hypothetical protein 2644 58.61 0 2804598..2805950 + 450 86607387 ugpB CYA_2785 - glycerol-3-phosphate ABC transporter, glycerol-3-phosphate binding protein 2645 57.93 0 2806202..2807254 + 350 86607388 upgA CYA_2786 - glycerol-3-phosphate ABC transporter, permease protein 2646 57.01 0 2807279..2807713 - 144 86607389 - CYA_2787 - hypothetical protein 2647 53.62 -1 2807749..2808024 - 91 86607390 rpsO CYA_2788 - ribosomal protein S15 2648 65.05 +1 2808113..2808793 + 226 86607391 - CYA_2789 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit-like protein 2649 55.14 -1 2808860..2809345 - 161 86607392 apcD CYA_2790 - allophycocyanin alpha, B subunit 2650 64.33 0 2809533..2810900 - 455 86607393 pilT-2 CYA_2791 - twitching mobility protein PilT 2651 60.72 0 2811142..2811831 - 229 86607394 folE CYA_2792 - GTP cyclohydrolase I 2652 59.23 0 2811955..2812680 - 241 86607395 - CYA_2793 - short chain dehydrogenase 2653 61.32 0 2812905..2814101 + 398 86607396 - CYA_2794 - iron ABC transporter ATP-binding protein 2654 61.63 0 2814557..2815450 + 297 86607397 - CYA_2795 - chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein 2655 64.80 +1 2815492..2816349 + 285 86607398 - CYA_2796 - HemK family methyltransferase 2656 62.26 0 2816491..2817261 + 256 86607399 - CYA_2797 - sensor histidine kinase 2657 59.70 0 2817287..2817688 - 133 86607400 - CYA_2798 - putative photosystem II protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0