version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2303 55.50 -1 2433346..2434626 - 426 86607047 - CYA_2424 - ISSoc2, transposase 2304 51.85 -1 2434481..2435074 - 197 86607048 - CYA_2425 - ISSoc2, resolvase 2305 55.00 -1 2436836..2436955 - 39 86607049 psbJ CYA_2427 - photosystem II reaction center protein J 2306 51.59 -1 2437096..2437221 - 41 86607050 psbL CYA_2428 - photosystem II reaction center protein PsbL 2307 46.53 -2 2437227..2437370 - 47 86607051 psbF CYA_2429 - cytochrome b559 subunit beta 2308 52.03 -1 2437454..2437699 - 81 86607052 psbE CYA_2430 - cytochrome b559 subunit alpha 2309 63.96 0 2438016..2439716 + 566 86607053 - CYA_2431 - S-layer domain-containing protein 2310 62.93 0 2440022..2441761 - 579 86607054 - CYA_2432 - putative exopolyphosphatase 2311 59.38 0 2441939..2443750 + 603 86607055 thrS CYA_2433 - threonyl-tRNA synthetase 2312 54.87 -1 2443789..2444127 + 112 86607056 - CYA_2434 - carbohydrate ABC transporter ATP-binding protein 2313 51.66 -1 2444148..2445353 + 401 86607057 - CYA_2435 - acetamidase/formamidase family protein 2314 60.08 0 2445984..2447531 + 515 86607058 - CYA_2437 - carbohydrate ABC transporter ATP-binding protein 2315 63.23 0 2447528..2449129 - 533 86607059 malQ CYA_2436 - 4-alpha-glucanotransferase 2316 63.17 0 2449285..2449941 - 218 86607060 pyrE CYA_2438 - orotate phosphoribosyltransferase 2317 51.52 -1 2450193..2450786 + 197 86607061 - CYA_2439 - ISSoc2, resolvase 2318 55.74 -1 2450641..2451921 + 426 86607062 - CYA_2440 - ISSoc2, transposase 2319 60.27 0 2451933..2452448 - 171 86607063 - CYA_2441 - MarR family transcriptional regulator 2320 53.62 -1 2452624..2452761 - 45 86607064 - CYA_2442 - hypothetical protein 2321 66.06 +1 2452833..2454146 + 437 86607065 - CYA_2444 - hypothetical protein 2322 62.64 0 2454051..2454224 - 57 86607066 - CYA_2443 - hypothetical protein 2323 56.42 0 2454482..2455057 - 191 86607067 yfiA CYA_2445 - ribosomal subunit interface protein 2324 61.77 0 2455787..2457031 + 414 86607068 - CYA_2446 - aluminium resistance protein 2325 61.35 0 2457021..2457923 + 300 86607069 - CYA_2447 - hypothetical protein 2326 51.39 -1 2458260..2458475 + 71 86607070 - CYA_2448 - hypothetical protein 2327 61.39 0 2458518..2458820 + 100 86607071 - CYA_2449 - hypothetical protein 2328 62.91 0 2458904..2459488 - 194 86607072 - CYA_2450 - S-layer domain-containing protein 2329 57.49 0 2459537..2459743 - 68 86607073 - CYA_2451 - hypothetical protein 2330 61.19 0 2459752..2460189 + 145 86607074 - CYA_2453 - TPR repeat-containing protein 2331 60.51 0 2460170..2460364 - 64 86607075 - CYA_2452 - hypothetical protein 2332 65.72 +1 2460477..2461535 - 352 86607076 thrC-2 CYA_2454 - threonine synthase 2333 65.62 +1 2461689..2463218 - 509 86607077 - CYA_2455 - isochorismate synthase 2334 63.09 0 2463470..2464447 + 325 86607078 menA CYA_2456 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2335 64.38 0 2464589..2466427 + 612 86607079 - CYA_2457 - hypothetical protein 2336 59.88 0 2466505..2467683 + 392 86607080 - CYA_2458 - YjgP/YjgQ family protein 2337 63.52 0 2467680..2471015 + 1111 86607081 - CYA_2459 - hypothetical protein 2338 62.62 0 2471113..2472348 + 411 86607082 - CYA_2460 - L,L-diaminopimelate aminotransferase 2339 62.95 0 2472469..2473437 + 322 86607083 - CYA_2461 - oxidoreductase, NAD-binding 2340 61.80 0 2473466..2474020 - 184 86607084 - CYA_2462 - putative iron-sulfur cluster-binding protein 2341 59.14 0 2474013..2474291 - 92 86607085 - CYA_2463 - hypothetical protein 2342 59.96 0 2474426..2474977 - 183 86607086 - CYA_2464 - DNA protection protein 2343 55.58 -1 2475226..2476479 + 417 86607087 - CYA_2465 - GTP-binding protein 2344 59.04 0 2476487..2477509 - 340 86607088 - CYA_2466 - glycosyl transferase, group 2 family protein 2345 60.96 0 2477559..2478521 - 320 86607089 hslO CYA_2467 - Hsp33-like chaperonin 2346 64.93 +1 2478895..2479182 + 95 86607090 - CYA_2468 - hypothetical protein 2347 62.37 0 2479464..2479952 + 162 86607091 - CYA_2469 - Mov34/MPN/PAD-1 family protein 2348 57.09 0 2480163..2480444 + 93 86607092 - CYA_2470 - ThiS domain-containing protein 2349 61.68 0 2480447..2481610 + 387 86607093 - CYA_2471 - hypothetical protein 2350 60.83 0 2481734..2483035 + 433 86607094 ribAB CYA_2473 - riboflavin biosynthesis protein RibA 2351 61.27 0 2483024..2483449 - 141 86607095 - CYA_2472 - hypothetical protein 2352 61.50 0 2483586..2484572 - 328 86607096 - CYA_2474 - GntR family transcriptional regulator 2353 61.26 0 2486028..2486582 + 184 86607097 - CYA_2476 - DoxX family protein 2354 61.21 0 2486621..2488672 - 683 86607098 ppk CYA_2477 - polyphosphate kinase 2355 62.08 0 2488854..2489813 - 319 86607099 - CYA_2478 - hydrophobic amino acid ABC transporter permease 2356 62.12 0 2489813..2490670 - 285 86607100 - CYA_2479 - hydrophobic amino acid ABC transporter permease 2357 66.27 +1 2490776..2491777 + 333 86607101 - CYA_2480 - putative lipoprotein 2358 64.74 +1 2491860..2493524 + 554 86607102 - CYA_2481 - sulfatase 2359 59.71 0 2493528..2494016 - 162 86607103 - CYA_2482 - hypothetical protein 2360 65.35 +1 2494430..2495191 + 253 86607104 fabG CYA_2483 - 3-oxoacyl-(acyl-carrier-protein) reductase 2361 64.12 0 2495197..2496843 - 548 86607105 ggt CYA_2484 - gamma-glutamyltransferase 2362 62.63 0 2496881..2497573 - 230 86607106 - CYA_2485 - HAD family hydrolase 2363 62.44 0 2497673..2498335 - 220 86607107 - CYA_2486 - hypothetical protein 2364 60.83 0 2498350..2498589 - 79 86607108 secG CYA_2487 - preprotein translocase subunit SecG 2365 59.11 0 2499093..2499383 + 96 86607109 - CYA_2488 - hypothetical protein 2366 62.34 0 2499425..2500210 - 261 86607110 panB CYA_2489 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2367 62.08 0 2500691..2501431 + 246 86607111 pcyA CYA_2492 - phycocyanobilin:ferredoxin oxidoreductase 2368 58.75 0 2501428..2502273 - 281 86607112 - CYA_2491 - hypothetical protein 2369 63.74 0 2502828..2503613 + 261 86607113 prmA CYA_2493 - ribosomal protein L11 methyltransferase 2370 66.18 +1 2503583..2504401 + 272 86607114 - CYA_2494 - hypothetical protein 2371 64.68 +1 2504482..2505741 + 419 86607115 hisS CYA_2495 - histidyl-tRNA synthetase 2372 63.59 0 2505749..2507278 + 509 86607116 - CYA_2496 - hypothetical protein 2373 61.41 0 2507293..2508129 - 278 86607117 - CYA_2497 - universal stress protein 2374 58.89 0 2508231..2509130 - 299 86607118 - CYA_2498 - hypothetical protein 2375 64.29 0 2509159..2510295 - 378 86607119 - CYA_2499 - putative lipoprotein 2376 62.07 0 2510292..2511791 - 499 86607120 - CYA_2500 - hypothetical protein 2377 58.71 0 2512198..2512599 + 133 86607121 - CYA_2501 - mannose-6-phosphate isomerase family protein 2378 62.28 0 2512762..2514654 + 630 86607122 - CYA_2502 - hypothetical protein 2379 56.83 0 2515200..2517008 + 602 86607123 - CYA_2503 - glycosyl transferase, group 2 2380 56.11 0 2517066..2517425 - 119 86607124 - CYA_2504 - hypothetical protein 2381 48.48 -2 2517430..2517528 + 32 86607125 - CYA_2505 - hypothetical protein 2382 61.28 0 2517680..2519407 - 575 86607126 phoD CYA_2506 - alkaline phosphatase 2383 59.22 0 2519672..2519953 + 93 86607127 clpS-2 CYA_2507 - ATP-dependent Clp protease adaptor protein ClpS 2384 62.39 0 2519969..2520763 + 264 86607128 - CYA_2509 - CAAX amino terminal protease family protein 2385 65.77 +1 2520713..2520823 - 36 86607129 - CYA_2508 - hypothetical protein 2386 63.17 0 2520824..2522311 - 495 86607130 - CYA_2510 - solute/sodium symporter (SSS) family protein 2387 63.64 0 2522304..2522534 - 76 86607131 - CYA_2511 - hypothetical protein 2388 65.97 +1 2522681..2523826 + 381 86607132 dprA CYA_2512 - DNA protecting protein DprA 2389 66.41 +1 2524851..2525636 + 261 86607133 hisA CYA_2513 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2390 60.45 0 2526051..2527241 + 396 86607134 - CYA_2514 - M20D family peptidase 2391 63.78 0 2527385..2527972 - 195 86607135 - CYA_2515 - hypothetical protein 2392 53.33 -1 2528172..2529896 - 574 86607136 - CYA_2516 - hypothetical protein 2393 52.69 -1 2529896..2530489 - 197 86607137 - CYA_2517 - hypothetical protein 2394 52.09 -1 2530486..2531679 - 397 86607138 - CYA_2518 - hypothetical protein 2395 54.99 -1 2531669..2535265 - 1198 86607139 - CYA_2519 - RecF/RecN/SMC domain-containing protein 2396 61.07 0 2535268..2536536 - 422 86607140 - CYA_2520 - Ser/Thr protein phosphatase family protein 2397 61.46 0 2536947..2539214 + 755 86607141 psaA CYA_2521 - photosystem I P700 chlorophyll a apoprotein A1 2398 62.29 0 2539236..2541473 + 745 86607142 psaB CYA_2522 - photosystem I P700 chlorophyll a apoprotein A2 2399 57.70 0 2541914..2543251 - 445 86607143 - CYA_2523 - hypothetical protein 2400 56.27 0 2543742..2544962 + 406 86607144 - CYA_2524 - putative lipoprotein 2401 51.59 -1 2545023..2546408 + 461 86607145 - CYA_2525 - putative lipoprotein 2402 58.56 0 2546716..2546826 + 36 86607146 - CYA_2526 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0