version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2221 65.37 +1 2343138..2346233 + 1031 86606965 infB CYA_2338 - translation initiation factor IF-2 2222 61.86 0 2346336..2348165 + 609 86606966 proS CYA_2339 - prolyl-tRNA synthetase 2223 55.66 -1 2348187..2348804 + 205 86606967 - CYA_2340 - hypothetical protein 2224 60.87 0 2348801..2349076 + 91 86606968 - CYA_2341 - hypothetical protein 2225 63.08 0 2349173..2350231 - 352 86606969 - CYA_2342 - hypothetical protein 2226 61.97 0 2350437..2350862 - 141 86606970 - CYA_2343 - ISSoc1, transposase, truncation 2227 58.92 0 2350926..2351390 - 154 86606971 - CYA_2344 - hypothetical protein 2228 56.59 0 2351600..2351728 + 42 86606972 - CYA_2345 - hypothetical protein 2229 61.62 0 2352095..2354095 - 666 86606973 tkt CYA_2346 - transketolase 2230 62.51 0 2354507..2355397 + 296 86606974 lipA-3 CYA_2347 - lipoyl synthase 2231 59.64 0 2356031..2356699 - 222 86606975 - CYA_2348 - TetR family transcriptional regulator 2232 55.37 -1 2357019..2357912 + 297 86606976 - CYA_2349 - fatty acid desaturase 2233 54.44 -1 2358244..2358513 - 89 86606977 - CYA_2350 - hypothetical protein 2234 50.76 -2 2358672..2358935 - 87 86606978 - CYA_2351 - LuxR family transcriptional regulator 2235 63.49 0 2359086..2360345 - 419 86606979 - CYA_2352 - sensor histidine kinase 2236 64.18 0 2360426..2361190 - 254 86606980 - CYA_2353 - short chain dehydrogenase/reductase family oxidoreductase 2237 51.78 -1 2362620..2363096 + 158 86606981 - CYA_2355 - ISSoc3, orfA transposase 2238 64.44 0 2363124..2364110 - 328 86606982 panE-2 CYA_2356 - 2-dehydropantoate 2-reductase 2239 60.19 0 2364133..2364240 - 35 86606983 petM CYA_2357 - cytochrome b6-f complex subunit PetM 2240 60.72 0 2364734..2365792 + 352 86606984 psbD-1 CYA_2358 - photosystem II protein D2 2241 61.74 0 2365935..2367356 + 473 86606985 psbC CYA_2359 - photosystem II 44 kDa subunit reaction center protein 2242 62.51 0 2367488..2368546 + 352 86606986 cobW CYA_2360 - cobalamin biosynthesis protein CobW 2243 62.28 0 2368608..2369564 - 318 86606987 - CYA_2361 - NAD-dependent epimerase/dehydratase family protein 2244 60.53 0 2369787..2370812 + 341 86606988 - CYA_2362 - OppBC ABC transporter family permease 2245 54.29 -1 2370850..2373006 + 718 86606989 - CYA_2363 - hypothetical protein 2246 55.47 -1 2373011..2373751 - 246 86606990 - CYA_2364 - hypothetical protein 2247 62.99 0 2373876..2374745 - 289 86606991 fabD CYA_2365 - malonyl CoA-acyl carrier protein transacylase 2248 66.77 +1 2374765..2375772 - 335 86606992 fabH CYA_2366 - 3-oxoacyl-(acyl-carrier-protein) synthase III 2249 63.37 0 2375778..2376869 - 363 86606993 plsX CYA_2367 - putative glycerol-3-phosphate acyltransferase PlsX 2250 60.15 0 2377352..2379085 - 577 86606994 - CYA_2368 - hypothetical protein 2251 61.35 0 2379498..2380418 + 306 86606995 trpC CYA_2369 - indole-3-glycerol-phosphate synthase 2252 56.67 0 2380459..2380698 + 79 86606996 - CYA_2370 - hypothetical protein 2253 63.59 0 2380763..2380957 + 64 86606997 - CYA_2371 - copper metallochaperone 2254 63.97 0 2381068..2383401 + 777 86606998 - CYA_2372 - copper-translocating P-type ATPase 2255 62.29 0 2383610..2384638 + 342 86606999 cbiX CYA_2373 - sirohydrochlorin cobaltochelatase 2256 56.08 0 2384822..2385643 + 273 86607000 - CYA_2375 - hypothetical protein 2257 61.00 0 2385640..2386257 - 205 86607001 - CYA_2374 - PAP/fibrillin family protein 2258 60.59 0 2386313..2387020 - 235 86607002 - CYA_2376 - Sua5/YciO/YrdC/YwlC family protein 2259 59.82 0 2387042..2387377 - 111 86607003 - CYA_2377 - hypothetical protein 2260 63.30 0 2387352..2388509 - 385 86607004 obgE CYA_2378 - GTPase ObgE 2261 59.57 0 2388710..2389681 + 323 86607005 rpsA CYA_2379 - 30S ribosomal protein S1 2262 64.76 +1 2389689..2389793 + 34 86607006 - CYA_2380 - hypothetical protein 2263 63.95 0 2389808..2391094 + 428 86607007 - CYA_2381 - resolvase family site-specific recombinase 2264 61.50 0 2391460..2392311 + 283 86607008 chlL CYA_2382 - protochlorophyllide reductase iron-sulfur ATP-binding protein 2265 62.07 0 2392470..2393447 + 325 86607009 - CYA_2383 - protochlorophyllide oxidoreductase 2266 62.67 0 2393477..2394877 + 466 86607010 chlN CYA_2385 - light-independent protochlorophyllide reductase subunit N 2267 59.07 0 2394874..2395110 - 78 86607011 - CYA_2384 - hypothetical protein 2268 64.91 +1 2395186..2396496 - 436 86607012 hemL CYA_2386 - glutamate-1-semialdehyde aminotransferase 2269 61.90 0 2396575..2397813 - 412 86607013 ispG CYA_2387 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2270 58.62 0 2398539..2399060 - 173 86607014 - CYA_2388 - hypothetical protein 2271 65.17 +1 2399147..2399950 + 267 86607015 cobK CYA_2390 - cobalt-precorrin-6x reductase 2272 60.50 0 2399908..2400264 - 118 86607016 - CYA_2389 - single-strand DNA-binding protein 2273 60.62 0 2400637..2402787 + 716 86607017 - CYA_2391 - NAD(P)H-quinone oxidoreductase subunit F 2274 51.85 -1 2402868..2403461 + 197 86607018 - CYA_2392 - ISSoc2, resolvase 2275 55.97 0 2403316..2404596 + 426 86607019 - CYA_2393 - ISSoc2, transposase 2276 62.18 0 2405090..2405869 - 259 86607020 - CYA_2394 - DNA-binding response regulator 2277 63.69 0 2405868..2407043 + 391 86607021 fni CYA_2395 - isopentenyl pyrophosphate isomerase 2278 60.78 0 2407304..2408917 - 537 86607022 - CYA_2396 - hypothetical protein 2279 60.70 0 2409118..2409318 - 66 86607023 - CYA_2398 - hypothetical protein 2280 60.20 0 2409290..2409985 - 231 86607024 - CYA_2399 - hypothetical protein 2281 57.49 0 2410282..2410488 + 68 86607025 - CYA_2400 - hypothetical protein 2282 62.79 0 2410355..2412211 + 618 86607026 - CYA_2401 - S8A family peptidase 2283 59.46 0 2412211..2412432 + 73 86607027 - CYA_2402 - hypothetical protein 2284 61.39 0 2412534..2412893 - 119 86607028 - CYA_2403 - pentapeptide repeat-containing protein 2285 61.36 0 2414646..2415662 - 338 86607029 - CYA_2405 - putative adenylate cyclase 2286 61.32 0 2415796..2416281 + 161 86607030 - CYA_2406 - hypothetical protein 2287 62.70 0 2416329..2417261 + 310 86607031 ribF CYA_2407 - riboflavin biosynthesis protein RibF 2288 66.41 +1 2417309..2418088 - 259 86607032 cobS CYA_2408 - cobalamin synthase 2289 59.71 0 2418121..2418465 - 114 86607033 - CYA_2409 - hypothetical protein 2290 58.27 0 2418526..2419740 - 404 86607034 rpoD CYA_2410 - RNA polymerase sigma factor RpoD 2291 63.96 0 2420392..2424051 + 1219 86607035 metH CYA_2411 - methionine synthase 2292 59.95 0 2424056..2424829 - 257 86607036 potC CYA_2412 - spermidine/putrescine ABC transporter, permease protein PotC 2293 64.23 0 2425128..2425949 - 273 86607037 - CYA_2413 - alpha/beta fold family hydrolase 2294 58.17 0 2426047..2426199 - 50 86607038 - CYA_2414 - hypothetical protein 2295 51.78 -1 2426212..2426688 - 158 86607039 - CYA_2415 - ISSoc3, orfA transposase 2296 60.57 0 2427961..2428911 - 316 86607040 - CYA_2417 - LysR family transcriptional regulator 2297 58.64 0 2429181..2429828 - 215 86607041 - CYA_2418 - hypothetical protein 2298 63.39 0 2430090..2430578 - 162 86607042 yqeG CYA_2419 - HAD family phosphatase 2299 62.92 0 2430622..2431743 - 373 86607043 - CYA_2420 - hypothetical protein 2300 60.78 0 2431864..2432628 - 254 86607044 pyrH CYA_2421 - uridylate kinase 2301 57.52 0 2432727..2432879 - 50 86607045 - CYA_2422 - hypothetical protein 2302 57.80 0 2432987..2433358 - 123 86607046 - CYA_2423 - hypothetical protein 2303 55.50 -1 2433346..2434626 - 426 86607047 - CYA_2424 - ISSoc2, transposase 2304 51.85 -1 2434481..2435074 - 197 86607048 - CYA_2425 - ISSoc2, resolvase 2305 55.00 -1 2436836..2436955 - 39 86607049 psbJ CYA_2427 - photosystem II reaction center protein J 2306 51.59 -1 2437096..2437221 - 41 86607050 psbL CYA_2428 - photosystem II reaction center protein PsbL 2307 46.53 -2 2437227..2437370 - 47 86607051 psbF CYA_2429 - cytochrome b559 subunit beta 2308 52.03 -1 2437454..2437699 - 81 86607052 psbE CYA_2430 - cytochrome b559 subunit alpha 2309 63.96 0 2438016..2439716 + 566 86607053 - CYA_2431 - S-layer domain-containing protein 2310 62.93 0 2440022..2441761 - 579 86607054 - CYA_2432 - putative exopolyphosphatase 2311 59.38 0 2441939..2443750 + 603 86607055 thrS CYA_2433 - threonyl-tRNA synthetase 2312 54.87 -1 2443789..2444127 + 112 86607056 - CYA_2434 - carbohydrate ABC transporter ATP-binding protein 2313 51.66 -1 2444148..2445353 + 401 86607057 - CYA_2435 - acetamidase/formamidase family protein 2314 60.08 0 2445984..2447531 + 515 86607058 - CYA_2437 - carbohydrate ABC transporter ATP-binding protein 2315 63.23 0 2447528..2449129 - 533 86607059 malQ CYA_2436 - 4-alpha-glucanotransferase 2316 63.17 0 2449285..2449941 - 218 86607060 pyrE CYA_2438 - orotate phosphoribosyltransferase 2317 51.52 -1 2450193..2450786 + 197 86607061 - CYA_2439 - ISSoc2, resolvase 2318 55.74 -1 2450641..2451921 + 426 86607062 - CYA_2440 - ISSoc2, transposase 2319 60.27 0 2451933..2452448 - 171 86607063 - CYA_2441 - MarR family transcriptional regulator 2320 53.62 -1 2452624..2452761 - 45 86607064 - CYA_2442 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0