version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2123 64.45 0 2244162..2245424 + 420 86606867 - CYA_2229 - S1C family peptidase 2124 63.89 0 2245576..2246475 + 299 86606868 - CYA_2230 - quaternary amine ABC transporter substrate-binding protein 2125 64.29 0 2246497..2247465 + 322 86606869 - CYA_2231 - quaternary amine ABC transporter ATP-binding protein 2126 64.40 0 2247462..2248079 + 205 86606870 - CYA_2232 - quaternary amine ABC transporter permease 2127 62.27 0 2248277..2248867 + 196 86606871 - CYA_2233 - RNA polymerase sigma factor 2128 64.32 0 2248888..2249655 + 255 86606872 - CYA_2234 - hypothetical protein 2129 61.51 0 2249700..2250320 + 206 86606873 - CYA_2235 - VanW family protein 2130 61.18 0 2250414..2251124 - 236 86606874 ubiE CYA_2236 - ubiquinone/menaquinone biosynthesis methyltransferase 2131 67.24 +1 2251176..2251874 - 232 86606875 - CYA_2237 - hypothetical protein 2132 62.01 0 2252019..2252297 - 92 86606876 - CYA_2238 - hypothetical protein 2133 53.21 -1 2252345..2252968 - 207 86606877 - CYA_2239 - putative chloramphenicol acetyltransferase 2134 65.07 +1 2253148..2253711 + 187 86606878 cobU CYA_2240 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 2135 59.30 0 2253781..2254269 + 162 86606879 - CYA_2241 - hypothetical protein 2136 62.57 0 2254275..2254811 + 178 86606880 - CYA_2242 - hypothetical protein 2137 59.90 0 2254932..2255552 - 206 86606881 - CYA_2243 - putative phosphatidylethanolamine-binding protein 2138 61.15 0 2255670..2256086 - 138 86606882 - CYA_2245 - hypothetical protein 2139 64.54 0 2256083..2256880 - 265 86606883 - CYA_2246 - hypothetical protein 2140 61.30 0 2256885..2258225 - 446 86606884 - CYA_2247 - tldD/pmbA family protein 2141 58.90 0 2258238..2258726 - 162 86606885 - CYA_2248 - hypothetical protein 2142 55.74 -1 2258727..2260007 - 426 86606886 - CYA_2249 - ISSoc2, transposase 2143 53.56 -1 2259862..2260479 - 205 86606887 - CYA_2250 - ISSoc2, resolvase 2144 53.16 -1 2260534..2260992 - 152 86606888 - CYA_2251 - hypothetical protein 2145 62.56 0 2261008..2262468 - 486 86606889 - CYA_2252 - U62 family peptidase 2146 62.48 0 2262759..2263379 + 206 86606890 - CYA_2253 - uracil-DNA glycosylase 2147 65.72 +1 2263460..2264308 - 282 86606891 - CYA_2254 - cyclopropane-fatty-acyl-phospholipid synthase family protein 2148 57.97 0 2264334..2264471 - 45 86606892 - CYA_2255 - hypothetical protein 2149 64.80 +1 2264431..2266038 + 535 86606893 - CYA_2256 - radical SAM domain-containing protein 2150 64.73 +1 2266059..2266988 - 309 86606894 rbsK CYA_2257 - ribokinase 2151 53.21 -1 2267109..2267420 + 103 86606895 - CYA_2258 - hypothetical protein 2152 60.40 0 2267426..2268175 - 249 86606896 - CYA_2259 - hypothetical protein 2153 61.62 0 2268264..2268362 + 32 86606897 - CYA_2261 - hypothetical protein 2154 60.42 0 2268271..2269023 - 250 86606898 - CYA_2260 - hypothetical protein 2155 56.67 0 2269213..2269932 + 239 86606899 - CYA_2263 - hypothetical protein 2156 60.94 0 2269929..2272094 - 721 86606900 - CYA_2262 - protein kinase 2157 63.12 0 2272522..2273481 + 319 86606901 ppnK CYA_2264 - inorganic polyphosphate/ATP-NAD kinase 2158 59.55 0 2273668..2274876 - 402 86606902 - CYA_2265 - hypothetical protein 2159 61.67 0 2274972..2276132 - 386 86606903 - CYA_2266 - DegT/DnrJ/EryC1/StrS aminotransferase family protein 2160 61.95 0 2276671..2277645 + 324 86606904 - CYA_2267 - heptosyltransferase family protein 2161 64.35 0 2278032..2279024 - 330 86606905 - CYA_2269 - M23B family peptidase 2162 64.23 0 2279028..2279849 - 273 86606906 - CYA_2270 - biotin--acetyl-CoA-carboxylase ligase 2163 63.98 0 2279868..2280500 - 210 86606907 - CYA_2271 - hypothetical protein 2164 64.50 0 2280497..2281234 - 245 86606908 pdxJ CYA_2272 - pyridoxal phosphate biosynthetic protein PdxJ 2165 60.49 0 2281403..2282470 + 355 86606909 - CYA_2273 - putative general secretory pathway protein 2166 57.14 0 2282600..2282914 - 104 86606910 - CYA_2274 - hypothetical protein 2167 60.55 0 2283075..2283761 + 228 86606911 lepB CYA_2275 - signal peptidase I 2168 60.80 0 2283777..2284748 - 323 86606912 sds CYA_2276 - solanesyl diphosphate synthase 2169 59.44 0 2284760..2285257 + 165 86606913 - CYA_2277 - hypothetical protein 2170 57.31 0 2285309..2285746 - 145 86606914 - CYA_2278 - hypothetical protein 2171 63.89 0 2285985..2286452 + 155 86606915 rpsP CYA_2279 - ribosomal protein S16 2172 62.84 0 2286516..2286776 + 86 86606916 - CYA_2280 - hypothetical protein 2173 64.22 0 2286773..2287876 + 367 86606917 - CYA_2281 - hypothetical protein 2174 66.54 +1 2287904..2288665 + 253 86606918 hisF CYA_2282 - imidazole glycerol phosphate synthase subunit HisF 2175 65.54 +1 2288683..2289480 + 265 86606919 cysQ CYA_2283 - 3'(2'),5'-bisphosphate nucleotidase 2176 62.15 0 2289492..2289956 - 154 86606920 - CYA_2284 - pentapeptide repeat-containing protein 2177 58.79 0 2290125..2290898 - 257 86606921 - CYA_2285 - pspA/IM30 family protein 2178 59.03 0 2291664..2291807 + 47 86606922 - CYA_2288 - hypothetical protein 2179 62.49 0 2291817..2293013 - 398 86606923 - CYA_2289 - Ser/Thr protein phosphatase family protein 2180 58.51 0 2293258..2293686 + 142 86606924 - CYA_2290 - FUR family transcriptional regulator 2181 62.58 0 2293751..2295856 - 701 86606925 - CYA_2291 - hypothetical protein 2182 61.06 0 2295979..2296602 - 207 86606926 - CYA_2292 - acetyltransferase 2183 60.68 0 2296553..2297020 - 155 86606927 - CYA_2293 - putative cyclase/dehydrase 2184 58.28 0 2297213..2298082 + 289 86606928 - CYA_2295 - hypothetical protein 2185 63.36 0 2298079..2298411 - 110 86606929 - CYA_2294 - antibiotic biosynthesis monooxygenase domain-containing protein 2186 65.99 +1 2298436..2299770 - 444 86606930 aroA CYA_2296 - 3-phosphoshikimate 1-carboxyvinyltransferase 2187 65.27 +1 2300104..2301033 + 309 86606931 mraW CYA_2297 - S-adenosyl-methyltransferase MraW 2188 60.71 0 2301138..2301674 + 178 86606932 - CYA_2299 - hypothetical protein 2189 56.99 0 2301671..2302414 - 247 86606933 - CYA_2298 - response regulator 2190 62.49 0 2302545..2303405 - 286 86606934 tyrA CYA_2300 - prephenate dehydrogenase 2191 58.53 0 2303622..2304125 + 167 86606935 - CYA_2301 - hypothetical protein 2192 58.20 0 2304173..2304928 - 251 86606936 scpA CYA_2302 - segregation and condensation protein A 2193 63.82 0 2305896..2306984 - 362 86606937 - CYA_2304 - glucose/sorbosone dehydrogenase family protein 2194 65.27 +1 2307197..2309632 + 811 86606938 - CYA_2306 - glycosy hydrolase family protein 2195 59.40 0 2309629..2310096 - 155 86606939 - CYA_2305 - anti-oxidant AhpCTSA family protein 2196 47.65 -2 2315321..2315851 - 176 86606940 - CYA_2312 - response regulator 2197 59.79 0 2315836..2317419 - 527 86606941 - CYA_2313 - hypothetical protein 2198 54.12 -1 2317558..2317836 - 92 86606942 - CYA_2314 - hypothetical protein 2199 63.60 0 2318279..2319127 + 282 86606943 - CYA_2315 - ABC transporter, ATP-binding protein 2200 57.22 0 2319170..2319889 - 239 86606944 - CYA_2316 - DNA-binding response regulator 2201 54.76 -1 2320184..2320645 + 153 86606945 - CYA_2317 - hypothetical protein 2202 66.17 +1 2320813..2321619 + 268 86606946 - CYA_2318 - hypothetical protein 2203 66.55 +1 2321826..2322668 + 280 86606947 - CYA_2319 - hypothetical protein 2204 64.44 0 2322726..2323265 + 179 86606948 - CYA_2320 - hypothetical protein 2205 64.81 +1 2323268..2323912 + 214 86606949 - CYA_2321 - cobalt transport protein CbiM 2206 65.69 +1 2323899..2324714 + 271 86606950 cbiQ CYA_2322 - cobalt ABC transporter, permease protein CbiQ 2207 64.32 0 2324913..2326232 + 439 86606951 yliG CYA_2323 - MiaB tRNA modifying enzyme-like protein 2208 65.66 +1 2326263..2326955 + 230 86606952 rpiA CYA_2325 - ribose 5-phosphate isomerase A 2209 64.67 +1 2326912..2327961 - 349 86606953 pdxA CYA_2324 - 4-hydroxythreonine-4-phosphate dehydrogenase 2210 59.61 0 2329476..2330453 + 325 86606954 - CYA_2326 - putative dehydrogenase, E1 component, beta subunit 2211 65.75 +1 2331574..2332773 + 399 86606955 - CYA_2328 - oxidoreductase, FAD-binding 2212 61.66 0 2332788..2334683 - 631 86606956 dnaG CYA_2329 - DNA primase 2213 58.91 0 2334829..2335176 + 115 86606957 petJ CYA_2330 - cytochrome c6 2214 63.79 0 2335176..2335523 + 115 86606958 - CYA_2331 - hypothetical protein 2215 59.96 0 2335568..2336134 + 188 86606959 - CYA_2332 - nuclear export factor GLE1-like protein 2216 63.20 0 2336152..2337768 + 538 86606960 copCD CYA_2334 - copper resistance protein C/D 2217 63.76 0 2337765..2340623 - 952 86606961 - CYA_2333 - TPR repeat- and protein kinase domain-containing protein 2218 60.65 0 2340708..2341106 - 132 86606962 - CYA_2335 - hypothetical protein 2219 60.77 0 2341359..2342393 + 344 86606963 - CYA_2336 - response regulator 2220 62.58 0 2342432..2342749 + 105 86606964 - CYA_2337 - hypothetical protein 2221 65.37 +1 2343138..2346233 + 1031 86606965 infB CYA_2338 - translation initiation factor IF-2 2222 61.86 0 2346336..2348165 + 609 86606966 proS CYA_2339 - prolyl-tRNA synthetase 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0