version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 160 65.62 +1 161686..162930 - 414 86604894 ubiH CYA_0164 - 2-octaprenyl-6-methoxyphenyl hydroxylase 161 63.14 0 162933..163925 - 330 86604895 - CYA_0166 - cyclopropane-fatty-acyl-phospholipid synthase family protein 162 62.03 0 164140..166383 - 747 86604896 metE-2 CYA_0167 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 163 53.70 -1 167117..167602 - 161 86604897 moaE CYA_0169 - molybdopterin converting factor, subunit 2 164 48.11 -2 167603..167866 - 87 86604898 - CYA_0170 - putative molybdopterin converting factor, subunit 1 165 52.24 -1 167841..168935 - 364 86604899 moaC CYA_0171 - molybdenum cofactor biosynthesis protein C 166 51.12 -2 168940..169878 - 312 86604900 moaA CYA_0172 - molybdenum cofactor biosynthesis protein A 167 54.90 -1 169880..171043 - 387 86604901 moeA CYA_0173 - molybdopterin biosynthesis protein MoeA 168 54.22 -1 171021..171494 - 157 86604902 - CYA_0174 - hypothetical protein 169 51.17 -2 174066..174407 + 113 86604903 - CYA_0177 - pilin domain-containing protein 170 65.08 +1 174653..175975 + 440 86604904 pyrC CYA_0178 - dihydroorotase 171 60.45 0 176347..176748 + 133 86604905 - CYA_0179 - hypothetical protein 172 62.28 0 176758..179400 - 880 86604906 clpB CYA_0180 - ATP-dependent chaperone protein ClpB 173 62.16 0 179593..181878 - 761 86604907 zam CYA_0181 - acetazolamide conferring resistance protein Zam 174 58.57 0 181936..182577 - 213 86604908 phoU CYA_0182 - phosphate transport system regulatory protein PhoU 175 63.43 0 182785..184113 + 442 86604909 - CYA_0183 - hypothetical protein 176 67.06 +1 184130..185644 + 504 86604910 - CYA_0185 - oxidoreductase, FAD-binding 177 63.24 0 185641..187449 - 602 86604911 treZ CYA_0184 - malto-oligosyltrehalose trehalohydrolase 178 54.00 -1 187712..187861 - 49 86604912 - CYA_0186 - hypothetical protein 179 58.89 0 187888..188067 + 59 86604913 - CYA_0187 - hypothetical protein 180 59.14 0 188130..188315 - 61 86604914 rpsU CYA_0188 - 30S ribosomal protein S21 181 62.13 0 188402..189658 - 418 86604915 - CYA_0189 - trypsin domain-containing lipoprotein 182 61.06 0 190539..190877 + 112 86604916 - CYA_0192 - hypothetical protein 183 62.68 0 191016..192194 + 392 86604917 dxr CYA_0193 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 184 63.04 0 192254..194020 + 588 86604918 - CYA_0194 - heavy metal ABC transporter (HMT) family permease/ATP-binding protein 185 66.42 +1 194111..195700 + 529 86604919 murE CYA_0196 - UDP-N-acetylmuramyl-tripeptide synthetase 186 66.08 +1 195697..196884 - 395 86604920 carA CYA_0195 - carbamoyl phosphate synthase small subunit 187 61.41 0 196981..197532 - 183 86604921 - CYA_0197 - putative pilin 188 60.11 0 197547..198674 - 375 86604922 - CYA_0198 - PddD domain-containing protein 189 60.52 0 198731..199495 - 254 86604923 - CYA_0199 - prepilin-type N-terminal cleavage/methylation domain-containing protein 190 61.07 0 199553..206794 - 2413 86604924 - CYA_0200 - hypothetical protein 191 62.48 0 206915..207511 - 198 86604925 - CYA_0201 - DNA-binding response regulator 192 65.14 +1 207609..208199 - 196 86604926 - CYA_0202 - pentapeptide repeat-containing protein 193 65.85 +1 208311..209162 - 283 86604927 mutM CYA_0203 - formamidopyrimidine-DNA glycosylase 194 54.50 -1 209208..209429 - 73 86604928 psaE CYA_0204 - photosystem I reaction center subunit IV 195 58.82 0 209709..209861 + 50 86604929 - CYA_0205 - CAB/ELIP/HLIP family protein 196 64.33 0 210133..211803 - 556 86604930 nadE CYA_0206 - NAD+ synthetase 197 58.20 0 211884..213749 - 621 86604931 uvrC CYA_0207 - excinuclease ABC subunit C 198 65.68 +1 214082..216415 - 777 86604932 - CYA_0208 - 1A family penicillin-binding protein 199 66.07 +1 216419..218263 - 614 86604933 - CYA_0209 - serine/threonine protein kinase 200 61.36 0 218206..218337 - 43 86604934 - CYA_0210 - hypothetical protein 201 65.47 +1 218392..219309 + 305 86604935 - CYA_0211 - histone deacetylase family protein 202 62.08 0 219321..220040 - 239 86604936 - CYA_0212 - protein phosphatase 2C family protein 203 60.62 0 220040..221776 - 578 86604937 - CYA_0213 - hypothetical protein 204 62.50 0 221773..222084 - 103 86604938 - CYA_0214 - hypothetical protein 205 62.67 0 222224..222949 - 241 86604939 cpcG1 CYA_0215 - phycobilisome rod-core linker polypeptide cpcG1 206 64.44 0 222992..223708 - 238 86604940 cpcF CYA_0216 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit 207 66.27 +1 223721..224473 - 250 86604941 cpcE-1 CYA_0217 - phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit 208 59.77 0 224564..224824 - 86 86604942 cpcD CYA_0218 - phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod 209 62.37 0 224962..225054 - 30 86604943 - CYA_0219 - hypothetical protein 210 58.69 0 225113..225601 - 162 86604944 cpcA-1 CYA_0220 - phycocyanin, alpha subunit 211 60.89 0 225749..226267 - 172 86604945 cpcB-1 CYA_0221 - phycocyanin, beta subunit 212 52.78 -1 226300..226515 + 71 86604946 - CYA_0222 - hypothetical protein 213 66.79 +1 226682..227497 - 271 86604947 trpA-1 CYA_0223 - tryptophan synthase subunit alpha 214 65.88 +1 227551..228951 - 466 86604948 - CYA_0224 - hydrophobic amino acid uptake ABC transporter amino acid-binding protein 215 58.80 0 229067..229282 - 71 86604949 - CYA_0225 - hypothetical protein 216 54.81 -1 229317..230522 - 401 86604950 - CYA_0226 - ISSoc7, transposase 217 64.82 +1 230628..231440 + 270 86604951 - CYA_0227 - hypothetical protein 218 58.99 0 231451..231828 - 125 86604952 - CYA_0228 - polar amino acid ABC transporter ATP-binding protein 219 55.86 0 232277..232387 + 36 86604953 - CYA_0229 - hypothetical protein 220 59.76 0 232464..232709 + 81 86604954 gvpG CYA_0230 - gas vesicle protein G 221 56.63 0 232782..233399 + 205 86604955 - CYA_0231 - hypothetical protein 222 62.93 0 233619..235439 + 606 86604956 - CYA_0233 - fibronectin-binding protein 223 61.46 0 235426..236730 - 434 86604957 - CYA_0232 - peptidase inhibitor 224 60.53 0 236956..237525 + 189 86604958 - CYA_0234 - hypothetical protein 225 62.25 0 237766..239034 + 422 86604959 - CYA_0235 - bifunctional sterol desaturase/short chain dehydrogenase 226 60.84 0 239220..240008 + 262 86604960 - CYA_0236 - putative lipoprotein 227 57.23 0 240083..240940 + 285 86604961 thyX CYA_0237 - thymidylate synthase, flavin-dependent 228 54.01 -1 240856..241740 + 294 86604962 - CYA_0238 - hypothetical protein 229 62.70 0 241889..243349 + 486 86604963 - CYA_0239 - sugar transferase family protein 230 62.00 0 243360..244130 + 256 86604964 purC CYA_0240 - phosphoribosylaminoimidazole-succinocarboxamide synthase 231 64.40 0 244138..245547 + 469 86604965 - CYA_0241 - hypothetical protein 232 52.59 -1 245744..246574 + 276 86604966 - CYA_0242 - hypothetical protein 233 63.02 0 246676..247608 - 310 86604967 hemC CYA_0243 - porphobilinogen deaminase 234 53.90 -1 247938..248399 + 153 86604968 - CYA_0244 - hypothetical protein 235 63.76 0 248588..250033 + 481 86604969 - CYA_0245 - glycosyl transferase, group 2 family protein 236 60.93 0 250107..251099 + 330 86604970 ilvC CYA_0246 - ketol-acid reductoisomerase 237 63.15 0 251123..252430 + 435 86604971 serS CYA_0247 - seryl-tRNA synthetase 238 62.53 0 252522..252956 + 144 86604972 - CYA_0248 - BlaI/MecI/CopY family transcriptional regulator 239 64.03 0 252953..253825 + 290 86604973 - CYA_0249 - hypothetical protein 240 57.66 0 254428..254949 + 173 86604974 ppa CYA_0251 - inorganic pyrophosphatase 241 63.07 0 255048..255797 + 249 86604975 - CYA_0252 - cytochrome c biogenesis membrane protein 242 62.70 0 255874..257310 + 478 86604976 - CYA_0254 - putative cytochrome c-type biogenesis protein ResB 243 60.56 0 257307..260417 - 1036 86604977 - CYA_0253 - sensory box histidine kinase 244 63.12 0 261102..262256 + 384 86604978 - CYA_0255 - FAD-binding protein 245 64.33 0 264137..265249 - 370 86604979 - CYA_0258 - oxidoreductase, FAD-binding 246 56.21 0 265283..265435 - 50 86604980 psbY CYA_0259 - photosystem II protein PsbY 247 52.25 -1 265440..265550 - 36 86604981 - CYA_0260 - hypothetical protein 248 62.38 0 265865..266866 - 333 86604982 - CYA_0261 - hypothetical protein 249 64.01 0 267160..268629 - 489 86604983 - CYA_0262 - glutamate-cysteine ligase family 2 protein 250 59.99 0 268685..270631 - 648 86604984 - CYA_0263 - alpha-amylase family protein 251 63.05 0 270708..272060 - 450 86604985 - CYA_0264 - tldD/pmbA family protein 252 57.39 0 272214..272795 - 193 86604986 - CYA_0265 - hypothetical protein 253 64.07 0 272782..273051 + 89 86604987 - CYA_0266 - hypothetical protein 254 63.92 0 273344..273817 + 157 86604988 ispF CYA_0267 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 255 63.58 0 274000..275781 + 593 86604989 - CYA_0268 - peptide/opine/nickel ABC transporter substrate-binding protein 256 64.08 0 275783..277948 - 721 86604990 - CYA_0269 - glycogen debranching enzyme family protein 257 59.58 0 278035..279093 - 352 86604991 - CYA_0270 - glycosyl transferase, group 1 family protein 258 48.65 -2 279213..279323 - 36 86604992 - CYA_0271 - hypothetical protein 259 55.07 -1 279300..279437 + 45 86604993 - CYA_0272 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0