version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2023 66.88 +1 2139799..2141178 - 459 86606766 trmE CYA_2126 - tRNA modification GTPase TrmE 2024 62.05 0 2141368..2143968 + 866 86606767 glgP CYA_2127 - alpha-glucan phosphorylase 2025 63.56 0 2144130..2145191 + 353 86606768 - CYA_2128 - TPR repeat-containing protein 2026 51.94 -1 2145184..2145312 + 42 86606769 - CYA_2129 - hypothetical protein 2027 58.86 0 2145309..2145833 + 174 86606770 ilvH CYA_2130 - acetolactate synthase 3 regulatory subunit 2028 64.17 0 2145879..2146520 + 213 86606771 - CYA_2131 - hypothetical protein 2029 63.45 0 2146709..2147455 - 248 86606772 - CYA_2132 - hypothetical protein 2030 63.90 0 2147594..2148640 + 348 86606773 glk CYA_2134 - glucokinase 2031 65.71 +1 2148619..2148723 - 34 86606774 - CYA_2133 - hypothetical protein 2032 60.24 0 2148726..2149301 - 191 86606775 - CYA_2135 - NUDIX family hydrolase 2033 64.13 0 2149406..2150902 + 498 86606776 trpE CYA_2136 - anthranilate synthase component I 2034 61.38 0 2150921..2151715 + 264 86606777 - CYA_2137 - phytanoyl-CoA dioxygenase PhyH family protein 2035 61.24 0 2151943..2152863 + 306 86606778 chlG CYA_2138 - bacteriochlorophyll/chlorophyll a synthase 2036 61.81 0 2152880..2153023 + 47 86606779 - CYA_2139 - hypothetical protein 2037 64.04 0 2153020..2153475 + 151 86606780 - CYA_2140 - hypothetical protein 2038 61.24 0 2153498..2154880 - 460 86606781 - CYA_2141 - sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein 2039 63.64 0 2154964..2156349 - 461 86606782 aspA CYA_2142 - aspartate ammonia-lyase 2040 57.68 0 2156386..2156652 - 88 86606783 - CYA_2143 - hypothetical protein 2041 57.89 0 2156949..2157506 + 185 86606784 infC CYA_2144 - translation initiation factor IF-3 2042 61.72 0 2157522..2157986 + 154 86606785 bcp CYA_2145 - bacterioferritin comigratory protein 2043 64.60 0 2158113..2160044 + 643 86606786 - CYA_2146 - serine/threonine protein kinase 2044 64.57 0 2160096..2161619 - 507 86606787 - CYA_2147 - GTP-binding domain-containing protein 2045 60.22 0 2161837..2162022 - 61 86606788 - CYA_2148 - hypothetical protein 2046 61.58 0 2161892..2162068 - 58 86606789 - CYA_2149 - hypothetical protein 2047 61.93 0 2162126..2162611 - 161 86606790 - CYA_2150 - fasciclin domain-containing protein 2048 64.74 +1 2162830..2164593 + 587 86606791 - CYA_2151 - phospholipase D/competence protein ComEA 2049 63.11 0 2164603..2165586 - 327 86606792 accA CYA_2152 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2050 61.72 0 2165821..2166285 + 154 86606793 - CYA_2154 - hypothetical protein 2051 59.83 0 2166261..2166743 - 160 86606794 - CYA_2153 - hypothetical protein 2052 61.82 0 2166747..2169575 - 942 86606795 - CYA_2155 - sensor histindine kinase/response regulator 2053 60.83 0 2169520..2170581 - 353 86606796 - CYA_2156 - putative methyl-accepting chemotaxis protein, truncation 2054 55.28 -1 2170715..2171908 + 397 86606797 - CYA_2158 - ISSoc1, transposase 2055 59.08 0 2171905..2172813 - 302 86606798 - CYA_2157 - hypothetical protein 2056 58.44 0 2172824..2173066 - 80 86606799 - CYA_2159 - hypothetical protein 2057 56.10 0 2173121..2173669 - 182 86606800 - CYA_2160 - CheW domain-containing protein 2058 53.07 -1 2173777..2174151 - 124 86606801 - CYA_2161 - response regulator 2059 58.15 0 2174199..2175443 - 414 86606802 - CYA_2162 - response regulator 2060 62.08 0 2175829..2176308 - 159 86606803 - CYA_2163 - NUDIX family hydrolase 2061 62.61 0 2176315..2177547 - 410 86606804 - CYA_2164 - hypothetical protein 2062 59.20 0 2177602..2177802 - 66 86606805 - CYA_2165 - hypothetical protein 2063 49.50 -2 2177856..2180051 - 731 86606806 - CYA_2166 - piwi domain-containing protein 2064 62.39 0 2180122..2180589 - 155 86606807 - CYA_2167 - hypothetical protein 2065 62.31 0 2180637..2181737 - 366 86606808 - CYA_2168 - putative lipoprotein 2066 62.37 0 2181900..2185367 - 1155 86606809 nrdJ CYA_2169 - ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein-contatining 2067 63.48 0 2185700..2186890 + 396 86606810 - CYA_2170 - M50B family peptidase 2068 62.92 0 2187005..2188312 + 435 86606811 - CYA_2171 - M16B family peptidase 2069 64.84 +1 2188312..2189625 + 437 86606812 - CYA_2172 - M16 family peptidase 2070 65.97 +1 2189855..2190574 - 239 86606813 - CYA_2173 - hypothetical protein 2071 60.38 0 2190749..2191273 + 174 86606814 - CYA_2174 - acetyltransferase 2072 65.82 +1 2191277..2191987 + 236 86606815 - CYA_2175 - hypothetical protein 2073 62.92 0 2191994..2192713 - 239 86606816 - CYA_2176 - Thf1-like protein 2074 64.16 0 2192866..2193981 + 371 86606817 proB CYA_2177 - gamma-glutamyl kinase 2075 60.76 0 2193986..2195272 - 428 86606818 - CYA_2178 - major facilitator transporter 2076 61.03 0 2195310..2196320 - 336 86606819 gap-3 CYA_2179 - glyceraldehyde-3-phosphate dehydrogenase, type I 2077 65.98 +1 2196566..2197444 - 292 86606820 murI CYA_2180 - glutamate racemase 2078 64.74 +1 2197595..2199466 - 623 86606821 - CYA_2181 - N-acetylmuramoyl-L-alanine amidase 2079 53.77 -1 2199575..2200729 + 384 86606822 - CYA_2182 - hypothetical protein 2080 54.41 -1 2200785..2203076 - 763 86606823 - CYA_2183 - nuclease domain-containing protein 2081 63.37 0 2203378..2204712 - 444 86606824 - CYA_2184 - sensor histidine kinase 2082 64.36 0 2204738..2205343 - 201 86606825 miaE CYA_2185 - tRNA-(MS[2]IO[6]A)-hydroxylase 2083 63.59 0 2205545..2206615 - 356 86606826 - CYA_2186 - phospho-2-dehydro-3-deoxyheptonate aldolase 2084 66.89 +1 2207155..2208510 - 451 86606827 - CYA_2187 - RND family efflux transporter MFP subunit 2085 62.96 0 2208774..2209502 - 242 86606829 sufR CYA_2189 - iron-sulfur cluster biosynthesis transcriptional regulator SufR 2086 56.09 0 2209665..2211101 + 478 86606830 sufB CYA_2190 - cysteine desulfurase activator complex subunit SufB 2087 47.12 -2 2211346..2211744 + 132 86606831 mscL CYA_2192 - large conductance mechanosensitive channel protein 2088 50.00 -2 2211725..2211826 - 33 86606832 - CYA_2191 - hypothetical protein 2089 55.51 -1 2211842..2212657 + 271 86606833 sufC CYA_2193 - FeS assembly ATPase SufC 2090 62.87 0 2212654..2213943 + 429 86606834 sufD CYA_2194 - FeS assembly protein SufD 2091 52.98 -1 2214617..2215069 + 150 86606835 - CYA_2195 - AbrB family transcriptional regulator 2092 64.45 0 2215206..2216606 + 466 86606836 - CYA_2196 - hypothetical protein 2093 60.80 0 2216928..2217353 - 141 86606837 - CYA_2197 - nodulation efficiency family protein 2094 62.08 0 2217437..2217676 - 79 86606838 - CYA_2198 - hypothetical protein 2095 56.08 0 2217819..2218007 + 62 86606839 - CYA_2200 - hypothetical protein 2096 64.61 0 2217989..2219059 - 356 86606840 rrmJ CYA_2199 - ribosomal RNA large subunit methytransferase J 2097 63.10 0 2219056..2219643 - 195 86606841 leuD CYA_2201 - isopropylmalate isomerase small subunit 2098 57.95 0 2219606..2219800 + 64 86606842 - CYA_2203 - hypothetical protein 2099 57.49 0 2219797..2220123 - 108 86606843 - CYA_2202 - hypothetical protein 2100 58.05 0 2220165..2220512 + 115 86606844 - CYA_2204 - hypothetical protein 2101 62.89 0 2220509..2220667 + 52 86606845 - CYA_2205 - hypothetical protein 2102 61.40 0 2221071..2222912 + 613 86606846 pyk CYA_2206 - pyruvate kinase 2103 47.73 -2 2223017..2223148 + 43 86606847 - CYA_2207 - hypothetical protein 2104 56.80 0 2223210..2223746 + 178 86606848 - CYA_2208 - hypothetical protein 2105 62.22 0 2224764..2225393 + 209 86606849 - CYA_2210 - BioY family protein 2106 48.59 -2 2226166..2226342 - 58 86606850 - CYA_2211 - hypothetical protein 2107 61.25 0 2226777..2227883 - 368 86606851 - CYA_2212 - hypothetical protein 2108 55.65 -1 2228071..2228433 + 120 86606852 - CYA_2213 - hypothetical protein 2109 56.12 0 2228458..2228694 + 78 86606853 rpmB CYA_2214 - 50S ribosomal protein L28 2110 60.11 0 2228768..2229514 - 248 86606854 - CYA_2215 - pentapeptide repeat-containing protein 2111 58.44 0 2229715..2230662 + 315 86606855 gshB CYA_2216 - glutathione synthetase 2112 62.01 0 2231060..2233144 - 694 86606856 - CYA_2217 - sensor histidine kinase 2113 61.34 0 2233250..2235388 - 712 86606857 pnpA CYA_2218 - polynucleotide phosphorylase/polyadenylase 2114 62.91 0 2235540..2235965 + 141 86606858 - CYA_2219 - putative arylamine N-acetyltransferase, truncation 2115 51.57 -1 2237234..2237710 + 158 86606859 - CYA_2221 - ISSoc3, orfA transposase 2116 62.25 0 2237805..2238347 + 180 86606860 - CYA_2222 - putative N-hydroxyarylamine O-acetyltransferase, truncation 2117 62.16 0 2238391..2240031 + 546 86606861 leuA CYA_2223 - 2-isopropylmalate synthase 2118 61.53 0 2240056..2241087 - 343 86606862 - CYA_2224 - ABC transporter, ATP-binding protein 2119 58.33 0 2241220..2241423 - 67 86606863 apcC CYA_2225 - phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core 2120 59.67 0 2241564..2242049 - 161 86606864 apcB-2 CYA_2226 - allophycocyanin, beta subunit 2121 58.02 0 2242110..2242595 - 161 86606865 apcA CYA_2227 - allophycocyanin, alpha subunit 2122 63.84 0 2242917..2243624 - 235 86606866 - CYA_2228 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0