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Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1769 58.47 0 1866057..1866605 + 182 86606512 frr CYA_1862 - ribosome recycling factor 1770 65.45 +1 1866701..1869412 + 903 86606513 - CYA_1863 - polyA polymerase family protein 1771 62.29 0 1869502..1870437 + 311 86606514 - CYA_1864 - M48B family peptidase 1772 62.79 0 1871350..1872561 + 403 86606515 aroB CYA_1866 - 3-dehydroquinate synthase 1773 62.90 0 1872540..1873547 + 335 86606516 asd CYA_1867 - aspartate-semialdehyde dehydrogenase 1774 64.62 0 1873582..1873776 + 64 86606517 - CYA_1868 - hypothetical protein 1775 63.32 0 1874380..1875156 + 258 86606518 - CYA_1869 - zinc/iron ABC transporter permease 1776 63.47 0 1875186..1875968 + 260 86606519 est CYA_1871 - carboxylesterase 1777 61.63 0 1875934..1876707 - 257 86606520 - CYA_1870 - hypothetical protein 1778 52.83 -1 1876803..1877120 + 105 86606521 - CYA_1872 - hypothetical protein 1779 53.19 -1 1877125..1877265 + 46 86606522 - CYA_1873 - hypothetical protein 1780 61.66 0 1878066..1879004 - 312 86606523 murB CYA_1875 - UDP-N-acetylenolpyruvoylglucosamine reductase 1781 61.12 0 1879001..1880533 - 510 86606524 murC CYA_1876 - UDP-N-acetylmuramate--L-alanine ligase 1782 67.89 +1 1880798..1881943 + 381 86606525 - CYA_1877 - membrane fusion protein family protein 1783 60.51 0 1881953..1883137 + 394 86606526 devC CYA_1878 - glycolipid ABC exporter (DevE) family permease protein 1784 63.96 0 1883316..1884053 + 245 86606527 devA CYA_1880 - glycolipid ABC exporter (DevE) family ATP-binding protein 1785 62.68 0 1884050..1885003 - 317 86606528 - CYA_1879 - NAD-dependent epimerase/dehydratase family protein 1786 63.65 0 1885069..1887720 - 883 86606529 alaS CYA_1881 - alanyl-tRNA synthetase 1787 64.46 0 1888007..1889680 + 557 86606530 - CYA_1882 - serine/threonine protein kinase 1788 66.26 +1 1889699..1890190 - 163 86606531 - CYA_1883 - hypothetical protein 1789 62.81 0 1890397..1891458 + 353 86606532 hisC CYA_1885 - histidinol-phosphate aminotransferase 1790 52.68 -1 1891482..1895570 - 1362 86606533 - CYA_1886 - hypothetical protein 1791 52.71 -1 1895866..1895994 - 42 86606534 - CYA_1887 - hypothetical protein 1792 58.23 0 1896114..1896587 + 157 86606535 - CYA_1888 - small heat shock protein (HSP20) family protein 1793 62.45 0 1896634..1897416 - 260 86606536 - CYA_1889 - hypothetical protein 1794 55.89 0 1897469..1898749 - 426 86606537 - CYA_1890 - ISSoc2, transposase 1795 52.19 -1 1898604..1899197 - 197 86606538 - CYA_1891 - ISSoc2, resolvase 1796 61.11 0 1899291..1900046 - 251 86606539 - CYA_1892 - DNA-binding response regulator RpaA 1797 64.14 0 1900194..1901972 - 592 86606540 - CYA_1893 - peptide/nickel/opine uptake ABC transporter ATP-binding protein 1798 62.86 0 1902123..1903463 - 446 86606541 - CYA_1894 - hypothetical protein 1799 65.73 +1 1903557..1905149 - 530 86606542 - CYA_1895 - M23B family peptidase 1800 62.00 0 1905549..1907069 + 506 86606543 cysS CYA_1896 - cysteinyl-tRNA synthetase 1801 62.75 0 1907093..1908622 - 509 86606544 - CYA_1897 - S10 family peptidase 1802 62.96 0 1908707..1909300 - 197 86606545 - CYA_1898 - hypothetical protein 1803 66.57 +1 1909497..1910519 - 340 86606546 thiL CYA_1899 - thiamine monophosphate kinase 1804 58.44 0 1910603..1912207 - 534 86606547 kaiC CYA_1900 - circadian clock protein KaiC 1805 54.46 -1 1912233..1912535 - 100 86606548 kaiB CYA_1901 - circadian clock protein KaiB 1806 60.98 0 1912539..1913453 - 304 86606549 kaiA CYA_1902 - circadian clock protein KaiA 1807 65.92 +1 1913692..1914624 + 310 86606550 - CYA_1903 - inosine-uridine preferring nucleoside hydrolase family protein 1808 64.29 0 1914936..1915523 + 195 86606551 pgsA CYA_1904 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1809 64.78 +1 1915477..1916058 + 193 86606552 ruvC CYA_1905 - crossover junction endodeoxyribonuclease RuvC 1810 60.80 0 1916125..1916772 + 215 86606553 - CYA_1906 - ATP-dependent protease La 1811 62.02 0 1916902..1917633 + 243 86606554 - CYA_1907 - hypothetical protein 1812 54.11 -1 1917679..1918737 + 352 86606555 - CYA_1908 - hypothetical protein 1813 55.56 -1 1918914..1920101 + 395 86606556 - CYA_1909 - hypothetical protein 1814 55.26 -1 1920107..1920781 - 224 86606557 - CYA_1910 - response regulator 1815 56.22 0 1920942..1921688 + 248 86606558 - CYA_1911 - S54 family peptidase 1816 55.76 0 1921739..1922380 + 213 86606559 - CYA_1912 - hypothetical protein 1817 51.57 -1 1922540..1923016 - 158 86606560 - CYA_1913 - ISSoc3, orfA transposase 1818 60.82 0 1924290..1925897 - 535 86606561 - CYA_1915 - NAD(P)H-quinone oxidoreductase subunit 4 1819 58.94 0 1926267..1927301 + 344 86606562 - CYA_1916 - putative adenosine deaminase 1820 61.90 0 1927378..1928427 - 349 86606563 ybbB CYA_1917 - tRNA 2-selenouridine synthase 1821 55.75 -1 1928619..1929314 + 231 86606564 - CYA_1918 - isochorismatase family protein 1822 54.27 -1 1929459..1930910 + 483 86606565 - CYA_1919 - carbohydrate ABC transporter ATP-binding protein 1823 51.50 -1 1930962..1931726 - 254 86606566 - CYA_1920 - urea ABC transporter, ATP-binding protein 1824 51.82 -1 1931761..1932528 - 255 86606567 - CYA_1921 - urea ABC transporter, ATP-binding protein 1825 54.51 -1 1932699..1933907 - 402 86606568 - CYA_1922 - urea ABC transporter, permease protein 1826 60.02 0 1933911..1935068 - 385 86606569 - CYA_1923 - urea ABC transporter, permease protein 1827 56.55 0 1935173..1936447 - 424 86606570 - CYA_1924 - urea ABC transporter, urea-binding protein 1828 62.27 0 1936845..1938779 + 644 86606571 - CYA_1925 - S9C family peptidase 1829 64.83 +1 1938847..1940973 + 708 86606572 - CYA_1926 - Slt family transglycosylase 1830 62.37 0 1941213..1941491 - 92 86606573 - CYA_1927 - hypothetical protein 1831 60.17 0 1941566..1942258 + 230 86606574 - CYA_1929 - DnaJ domain-containing protein 1832 58.97 0 1942255..1943112 - 285 86606575 - CYA_1928 - S49 family peptidase 1833 60.97 0 1943183..1944007 - 274 86606576 - CYA_1930 - hypothetical protein 1834 57.95 0 1944066..1945040 - 324 86606577 - CYA_1931 - fatty acid desaturase 1835 60.98 0 1945381..1945626 + 81 86606578 psaK CYA_1932 - photosystem I reaction center protein PsaK 1836 52.17 -1 1945752..1945889 + 45 86606579 psbK CYA_1933 - photosystem II reaction center protein K 1837 60.56 0 1946054..1946593 - 179 86606580 - CYA_1934 - hypothetical protein 1838 60.87 0 1946705..1947118 - 137 86606581 - CYA_1935 - hypothetical protein 1839 63.83 0 1947458..1948516 + 352 86606582 chlI CYA_1936 - magnesium chelatase, ATPase subunit I 1840 53.24 -1 1948622..1949239 + 205 86606583 - CYA_1937 - ISSoc2, resolvase 1841 55.66 -1 1949094..1950374 + 426 86606584 - CYA_1938 - ISSoc2, transposase 1842 66.22 +1 1950384..1951052 - 222 86606585 - CYA_1939 - hypothetical protein 1843 61.14 0 1951110..1951634 - 174 86606586 - CYA_1940 - thermonuclease 1844 63.20 0 1951778..1952932 - 384 86606587 - CYA_1941 - hypothetical protein 1845 59.88 0 1953067..1953891 - 274 86606588 icc CYA_1942 - putative 3'',5''-cyclic-nucleotide phosphodiesterase 1846 59.51 0 1954079..1954609 - 176 86606589 psbP CYA_1943 - photosystem II oxygen evolving complex protein PsbP 1847 58.43 0 1954758..1957040 - 760 86606590 - CYA_1944 - RelA/SpoT family protein 1848 62.99 0 1957239..1958108 - 289 86606591 rbgA CYA_1945 - ribosomal biogenesis GTPase 1849 58.85 0 1958288..1958773 + 161 86606592 - CYA_1946 - iron-sulfur cluster-binding protein 1850 65.19 +1 1958780..1960201 + 473 86606593 - CYA_1947 - carbohydrate kinase 1851 63.47 0 1960584..1962242 - 552 86606594 - CYA_1948 - hypothetical protein 1852 62.20 0 1962280..1962861 - 193 86606595 - CYA_1949 - AhpC/TSA family protein 1853 62.56 0 1962899..1963336 - 145 86606596 - CYA_1950 - hypothetical protein 1854 65.07 +1 1963340..1963903 - 187 86606597 - CYA_1951 - putative lipoprotein 1855 63.09 0 1964218..1965027 - 269 86606598 - CYA_1953 - RNA methyltransferase 1856 63.54 0 1965094..1965669 + 191 86606599 - CYA_1954 - putative lipoprotein 1857 63.38 0 1965676..1966587 + 303 86606600 lpxC CYA_1955 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1858 56.07 0 1966855..1968081 + 408 86606601 - CYA_1956 - ISSoc5, transposase 1859 60.28 0 1968161..1968661 + 166 86606602 fabZ CYA_1957 - (3R)-hydroxymyristoyl-ACP dehydratase 1860 51.36 -1 1968830..1969306 - 158 86606603 - CYA_1958 - ISSoc3, orfA transposase 1861 58.33 0 1969262..1970533 + 423 86606604 - CYA_1959 - ISSoc3, orfB transposase 1862 62.61 0 1970741..1971652 + 303 86606605 lpxA CYA_1960 - UDP-N-acetylglucosamine acyltransferase 1863 64.90 +1 1971649..1972839 + 396 86606606 lpxB CYA_1961 - lipid-A-disaccharide synthase 1864 64.37 0 1972842..1973888 - 348 86606607 - CYA_1962 - hypothetical protein 1865 62.38 0 1973893..1974942 - 349 86606608 - CYA_1963 - mandelate racemase/muconate lactonizing enzyme family protein 1866 60.38 0 1975121..1976758 + 545 86606609 - CYA_1964 - acetolactate synthase 1867 61.20 0 1976915..1978981 + 688 86606610 - CYA_1965 - type IV pilus assembly protein PilB 1868 63.48 0 1979154..1980284 + 376 86606611 pilT-1 CYA_1966 - twitching motility protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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