version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1681 63.22 0 1777438..1778568 - 376 86606424 purK CYA_1770 - phosphoribosylaminoimidazole carboxylase ATPase subunit 1682 53.05 -1 1778635..1778847 + 70 86606425 - CYA_1771 - hypothetical protein 1683 51.68 -1 1778902..1779495 + 197 86606426 - CYA_1772 - ISSoc2, resolvase 1684 55.74 -1 1779350..1780630 + 426 86606427 - CYA_1773 - ISSoc2, transposase 1685 59.33 0 1780608..1781207 + 199 86606428 - CYA_1774 - hypothetical protein 1686 62.73 0 1781213..1781974 + 253 86606429 trmD CYA_1775 - tRNA (guanine-N(1)-)-methyltransferase 1687 63.28 0 1781965..1782318 + 117 86606430 - CYA_1776 - hypothetical protein 1688 54.68 -1 1782420..1782686 + 88 86606431 secE CYA_1777 - preprotein translocase subunit SecE 1689 60.86 0 1782770..1783441 + 223 86606432 nusG CYA_1778 - transcription antitermination protein NusG 1690 59.62 0 1783451..1783876 + 141 86606433 rplK CYA_1779 - 50S ribosomal protein L11 1691 59.49 0 1783976..1784686 + 236 86606434 rplA CYA_1780 - 50S ribosomal protein L1 1692 52.25 -1 1784679..1784789 + 36 86606435 - CYA_1781 - hypothetical protein 1693 60.28 0 1785005..1785568 + 187 86606436 rplJ CYA_1782 - 50S ribosomal protein L10 1694 59.18 0 1785642..1786055 + 137 86606437 rplL CYA_1784 - 50S ribosomal protein L7/L12 1695 59.29 0 1785659..1786702 - 347 86606438 - CYA_1783 - hypothetical protein 1696 61.07 0 1786385..1787563 + 392 86606439 oxaA CYA_1785 - putative inner membrane protein translocase component YidC 1697 59.04 0 1787607..1788275 + 222 86606440 - CYA_1786 - R3H domain-containing protein 1698 61.90 0 1788361..1788864 + 167 86606441 - CYA_1787 - hypothetical protein 1699 57.02 0 1788917..1789828 + 303 86606442 ubiA CYA_1788 - tocopherol phytyltransferase 1700 60.46 0 1789887..1790675 - 262 86606443 - CYA_1789 - S4 domain-containing protein 1701 67.20 +1 1790928..1792973 - 681 86606444 - CYA_1791 - putative hydantoin utilization protein A 1702 61.53 0 1793011..1794354 - 447 86606445 - CYA_1792 - hypothetical protein 1703 64.90 +1 1794531..1795040 - 169 86606446 - CYA_1793 - hypothetical protein 1704 59.64 0 1795065..1795619 - 184 86606447 - CYA_1794 - hypothetical protein 1705 64.23 0 1795708..1797021 - 437 86606448 prc-1 CYA_1795 - C-terminal processing peptidase 1706 57.56 0 1797227..1797874 + 215 86606449 petB CYA_1796 - cytochrome b6 1707 56.97 0 1797970..1798464 + 164 86606450 petD CYA_1797 - cytochrome b6-f complex subunit IV 1708 62.39 0 1798607..1799752 + 381 86606451 leuB CYA_1798 - 3-isopropylmalate dehydrogenase 1709 56.74 0 1799868..1800542 - 224 86606452 ntcA CYA_1799 - nitrogen-responsive regulatory protein 1710 59.28 0 1800809..1802608 + 599 86606453 - CYA_1800 - M61 family peptidase 1711 43.20 -2 1802690..1803814 + 374 86606454 - CYA_1801 - hypothetical protein 1712 60.81 0 1803822..1804709 - 295 86606455 - CYA_1802 - hypothetical protein 1713 60.55 0 1805069..1805722 + 217 86606456 upp CYA_1803 - uracil phosphoribosyltransferase 1714 59.74 0 1806029..1806937 + 302 86606457 - CYA_1804 - mannosyl-3-phosphoglycerate phosphatase 1715 61.75 0 1807062..1807631 + 189 86606458 - CYA_1805 - TPR repeat-containing protein 1716 47.17 -2 1807825..1808778 + 317 86606459 - CYA_1806 - DnaJ domain-containing protein 1717 44.73 -2 1808788..1809849 - 353 86606460 - CYA_1807 - hypothetical protein 1718 60.42 0 1810185..1810472 + 95 86606461 - CYA_1808 - hypothetical protein 1719 61.34 0 1810515..1811885 + 456 86606462 - CYA_1809 - hypothetical protein 1720 62.28 0 1811890..1814445 + 851 86606463 - CYA_1810 - hypothetical protein 1721 58.87 0 1814550..1815614 + 354 86606464 psbA-3 CYA_1811 - photosystem II protein D1 1722 60.42 0 1815754..1816890 + 378 86606465 ruvB CYA_1812 - Holliday junction DNA helicase B 1723 61.03 0 1817211..1819907 - 898 86606466 - CYA_1814 - putative phycobilisome 120 kDa linker polypeptide, core 1724 62.27 0 1820137..1822299 + 720 86606467 - CYA_1816 - TPR repeat-containing protein 1725 58.60 0 1822540..1823742 - 400 86606468 - CYA_1817 - major facilitator transporter 1726 53.23 -1 1823895..1824095 - 66 86606469 - CYA_1818 - NifT/FixU family protein 1727 56.82 0 1824092..1824355 - 87 86606470 nifZ CYA_1819 - NifZ protein 1728 62.71 0 1824491..1825678 - 395 86606471 aksA CYA_1820 - trans-homoaconitate synthase 1729 51.96 -1 1825837..1825938 + 33 86606472 - CYA_1822 - hypothetical protein 1730 58.79 0 1825927..1827462 - 511 86606473 nifK CYA_1821 - nitrogenase molybdenum-iron protein beta chain 1731 58.33 0 1827528..1828991 - 487 86606474 nifD CYA_1823 - nitrogenase molybdenum-iron protein alpha chain 1732 57.57 0 1829088..1829966 - 292 86606475 nifH CYA_1824 - nitrogenase iron protein 1733 60.38 0 1830244..1831182 - 312 86606476 nifU CYA_1825 - Fe-S cluster assembly protein NifU 1734 63.90 0 1831239..1832429 - 396 86606477 nifS CYA_1826 - cysteine desulfurase 1735 56.80 0 1832478..1832771 - 97 86606478 - CYA_1827 - ferredoxin, 4Fe-4S 1736 62.00 0 1832797..1834233 - 478 86606479 nifB CYA_1828 - nitrogenase cofactor biosynthesis protein NifB 1737 60.00 0 1834386..1834505 - 39 86606480 - CYA_1829 - hypothetical protein 1738 61.22 0 1835005..1835298 + 97 86606481 - CYA_1830 - hypothetical protein 1739 59.16 0 1835353..1835898 + 181 86606482 dpsA CYA_1831 - nutrient-stress induced DNA binding protein 1740 56.00 0 1835941..1836165 + 74 86606483 - CYA_1832 - hypothetical protein 1741 59.72 0 1836169..1836528 + 119 86606484 - CYA_1833 - Mo-dependent nitrogenase family protein 1742 61.62 0 1836519..1837925 + 468 86606485 nifE CYA_1834 - nitrogenase MoFe cofactor biosynthesis protein NifE 1743 63.75 0 1837913..1839250 + 445 86606486 nifN CYA_1835 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 1744 60.24 0 1839325..1839744 + 139 86606487 nifX CYA_1836 - nitrogenase cofactor biosynthesis protein NifX 1745 59.43 0 1839747..1840202 + 151 86606488 - CYA_1837 - hypothetical protein 1746 57.58 0 1840269..1840532 + 87 86606489 - CYA_1838 - hypothetical protein 1747 55.19 -1 1840529..1840894 + 121 86606490 nifW CYA_1839 - nitrogenase stabilizing/protective protein nifW 1748 50.00 -2 1840937..1841236 + 99 86606491 - CYA_1840 - ferredoxin, 2Fe-2S 1749 50.53 -2 1841265..1841642 + 125 86606492 - CYA_1841 - FeoA domain-containing protein 1750 53.88 -1 1841737..1841994 + 85 86606493 - CYA_1842 - hypothetical protein 1751 54.99 -1 1842337..1843989 + 550 86606494 - CYA_1843 - transcriptional regulator PatB 1752 44.76 -2 1844018..1844227 - 69 86606495 - CYA_1844 - molybdenum-pterin binding domain-containing protein 1753 57.55 0 1844477..1845244 + 255 86606496 modA CYA_1845 - molybdate ABC transporter, molybdate-binding protein 1754 61.47 0 1845268..1847055 + 595 86606497 modB CYA_1846 - molybdate ABC transporter, permease protein 1755 64.58 0 1847074..1848795 - 573 86606498 cbiG/cobJ-2 CYA_1847 - cbiG protein/precorrin-3B C17-methyltransferase 1756 61.86 0 1849177..1850049 + 290 86606499 - CYA_1848 - hypothetical protein 1757 58.97 0 1850154..1851218 + 354 86606500 psbA-4 CYA_1849 - photosystem II protein D1 1758 62.98 0 1851392..1852504 + 370 86606501 ruvB CYA_1850 - Holliday junction DNA helicase B 1759 61.93 0 1852542..1855241 - 899 86606502 - CYA_1851 - putative phycobilisome 120 kDa linker polypeptide, core 1760 65.47 +1 1855686..1857611 + 641 86606503 - CYA_1852 - TPR repeat-containing protein 1761 56.93 0 1857739..1859988 - 749 86606504 - CYA_1854 - TPR repeat-containing protein 1762 55.56 -1 1860049..1860273 + 74 86606505 - CYA_1856 - hypothetical protein 1763 61.07 0 1860270..1861091 - 273 86606506 - CYA_1855 - metal chelate ABC transporter, metal chelate-binding protein 1764 64.04 0 1861251..1862810 - 519 86606507 crtH CYA_1857 - carotenoid isomerase 1765 63.92 0 1862898..1863845 - 315 86606508 potB CYA_1858 - spermidine/putrescine ABC transporter, permease protein 1766 63.67 0 1863839..1864972 - 377 86606509 potA CYA_1859 - spermidine/putrescine ABC transporter, ATP-binding protein 1767 64.55 0 1865040..1865843 - 267 86606510 - CYA_1860 - hypothetical protein 1768 54.70 -1 1865824..1865940 + 38 86606511 - CYA_1861 - hypothetical protein 1769 58.47 0 1866057..1866605 + 182 86606512 frr CYA_1862 - ribosome recycling factor 1770 65.45 +1 1866701..1869412 + 903 86606513 - CYA_1863 - polyA polymerase family protein 1771 62.29 0 1869502..1870437 + 311 86606514 - CYA_1864 - M48B family peptidase 1772 62.79 0 1871350..1872561 + 403 86606515 aroB CYA_1866 - 3-dehydroquinate synthase 1773 62.90 0 1872540..1873547 + 335 86606516 asd CYA_1867 - aspartate-semialdehyde dehydrogenase 1774 64.62 0 1873582..1873776 + 64 86606517 - CYA_1868 - hypothetical protein 1775 63.32 0 1874380..1875156 + 258 86606518 - CYA_1869 - zinc/iron ABC transporter permease 1776 63.47 0 1875186..1875968 + 260 86606519 est CYA_1871 - carboxylesterase 1777 61.63 0 1875934..1876707 - 257 86606520 - CYA_1870 - hypothetical protein 1778 52.83 -1 1876803..1877120 + 105 86606521 - CYA_1872 - hypothetical protein 1779 53.19 -1 1877125..1877265 + 46 86606522 - CYA_1873 - hypothetical protein 1780 61.66 0 1878066..1879004 - 312 86606523 murB CYA_1875 - UDP-N-acetylenolpyruvoylglucosamine reductase 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0