version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1437 62.61 0 1524408..1525343 + 311 86606181 - CYA_1515 - cytochrome oxidase assembly protein 1438 60.44 0 1525396..1526391 + 331 86606182 cyoE CYA_1517 - protoheme IX farnesyltransferase 1439 62.39 0 1527847..1529391 + 514 86606183 - CYA_1518 - outer membrane efflux family protein 1440 58.17 0 1529634..1530245 - 203 86606184 rpsD CYA_1519 - 30S ribosomal protein S4 1441 61.48 0 1530410..1531546 - 378 86606185 gmd CYA_1520 - GDP-mannose 4,6-dehydratase 1442 65.20 +1 1531693..1533054 - 453 86606186 - CYA_1521 - nicotinate phosphoribosyltransferase 1443 61.84 0 1533207..1534283 + 358 86606187 - CYA_1522 - hypothetical protein 1444 63.91 0 1534364..1535596 + 410 86606188 hisZ CYA_1524 - ATP phosphoribosyltransferase regulatory subunit 1445 61.22 0 1535547..1537475 - 642 86606189 gyrB CYA_1523 - DNA gyrase subunit B 1446 62.75 0 1537657..1538217 - 186 86606190 rimM CYA_1525 - 16S rRNA-processing protein 1447 57.89 0 1538229..1539197 - 322 86606191 - CYA_1526 - HflC/HflK family protein 1448 48.15 -2 1539214..1539321 + 35 86606192 - CYA_1527 - hypothetical protein 1449 55.69 -1 1539402..1540394 + 330 86606193 - CYA_1528 - pyridine nucleotide-disulfide oxidoreductase 1450 55.34 -1 1540474..1541559 + 361 86606194 - CYA_1529 - polysaccharide deacetylase family protein 1451 62.91 0 1541632..1542297 + 221 86606195 - CYA_1530 - hypothetical protein 1452 64.03 0 1542429..1543451 - 340 86606196 - CYA_1531 - M23B family peptidase 1453 63.58 0 1543567..1544442 + 291 86606197 - CYA_1532 - hypothetical protein 1454 62.42 0 1544448..1544918 - 156 86606198 lspA CYA_1533 - lipoprotein signal peptidase 1455 60.00 0 1545156..1545380 - 74 86606199 - CYA_1534 - hypothetical protein 1456 61.39 0 1545458..1545988 - 176 86606200 cysC CYA_1535 - adenylylsulfate kinase 1457 64.52 0 1546079..1547335 + 418 86606201 argD CYA_1537 - acetylornithine aminotransferase 1458 64.01 0 1547332..1547745 - 137 86606202 - CYA_1536 - hypothetical protein 1459 62.55 0 1547900..1548724 + 274 86606203 - CYA_1538 - creatininase 1460 59.43 0 1548851..1549513 + 220 86606204 - CYA_1539 - hypothetical protein 1461 58.86 0 1549537..1550202 + 221 86606205 - CYA_1540 - hypothetical protein 1462 63.07 0 1550208..1550846 - 212 86606206 - CYA_1541 - Crp/FNR family transcriptional regulator 1463 61.52 0 1551104..1551511 + 135 86606207 atpC CYA_1542 - ATP synthase F1, epsilon subunit 1464 61.54 0 1551633..1552100 + 155 86606208 - CYA_1544 - MerR family transcriptional regulator 1465 62.82 0 1552061..1553908 - 615 86606209 glmS CYA_1543 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 1466 62.75 0 1553982..1555208 - 408 86606210 - CYA_1545 - mce related protein 1467 57.37 0 1556256..1557062 - 268 86606211 - CYA_1547 - TerC family membrane protein 1468 66.79 +1 1557330..1558139 - 269 86606212 - CYA_1548 - circadian phase modifier CpmA-like protein 1469 60.20 0 1558160..1559056 - 298 86606213 - CYA_1549 - universal stress protein 1470 60.30 0 1559184..1560959 - 591 86606214 dnaB CYA_1550 - replicative DNA helicase 1471 58.23 0 1561070..1561531 - 153 86606215 rplI CYA_1551 - ribosomal protein L9 1472 57.69 0 1561867..1562946 + 359 86606216 pstS-2 CYA_1552 - phosphate ABC transporter, phosphate-binding protein 1473 55.93 0 1562971..1563939 + 322 86606217 pstC-1 CYA_1553 - phosphate ABC transporter, permease protein PstC 1474 57.11 0 1563946..1564845 + 299 86606218 pstA-1 CYA_1554 - phosphate ABC transporter, permease protein PtsA 1475 56.16 0 1564882..1565709 + 275 86606219 pstB-1 CYA_1555 - phosphate ABC transporter, ATP-binding protein 1476 60.02 0 1565775..1566602 + 275 86606220 - CYA_1556 - hemolysin A 1477 56.32 0 1566646..1567080 + 144 86606221 - CYA_1557 - TPR repeat-containing protein 1478 51.96 -1 1567349..1567552 + 67 86606222 - CYA_1558 - hypothetical protein 1479 61.59 0 1567851..1569032 - 393 86606223 sat CYA_1559 - sulfate adenylyltransferase 1480 56.99 0 1569146..1569517 - 123 86606224 - CYA_1560 - hypothetical protein 1481 60.66 0 1569646..1570428 - 260 86606225 - CYA_1561 - putative chromosome partitioning protein ParA 1482 57.26 0 1570546..1571832 + 428 86606226 glgC CYA_1562 - glucose-1-phosphate adenylyltransferase 1483 59.84 0 1571985..1573757 + 590 86606227 - CYA_1563 - hypothetical protein 1484 64.27 0 1573800..1574174 + 124 86606228 - CYA_1564 - hypothetical protein 1485 56.67 0 1574337..1574666 + 109 86606229 - CYA_1565 - hypothetical protein 1486 61.78 0 1574742..1576091 + 449 86606230 - CYA_1567 - cytosine deaminase 1487 65.73 +1 1576088..1577257 - 389 86606231 - CYA_1566 - hypothetical protein 1488 60.46 0 1577385..1577690 + 101 86606232 - CYA_1568 - hypothetical protein 1489 65.04 +1 1577759..1578805 + 348 86606233 thiE CYA_1569 - thiamine-phosphate pyrophosphorylase 1490 62.91 0 1578942..1580483 + 513 86606234 - CYA_1570 - AAA family ATPase 1491 61.37 0 1580613..1582763 + 716 86606235 - CYA_1571 - oxidoreductase, FAD-binding 1492 57.23 0 1583158..1583496 + 112 86606236 - CYA_1572 - hypothetical protein 1493 60.53 0 1583545..1583886 + 113 86606237 - CYA_1573 - histidine triad family protein 1494 61.29 0 1583968..1584618 + 216 86606238 cobH-2 CYA_1574 - precorrin-8X methylmutase 1495 59.92 0 1584648..1585166 + 172 86606239 - CYA_1575 - hypothetical protein 1496 62.62 0 1585247..1586977 - 576 86606240 - CYA_1576 - putative diflavin flavoprotein 1497 64.40 0 1587092..1588858 - 588 86606241 - CYA_1577 - GTP-binding protein 1498 56.32 0 1588905..1589078 - 57 86606242 - CYA_1578 - hypothetical protein 1499 43.06 -2 1589130..1589561 - 143 90296796 - CYA_1579 - hypothetical protein 1500 54.47 -1 1589713..1589835 - 40 86606243 - CYA_1580 - hypothetical protein 1501 58.62 0 1589902..1590858 - 318 86606244 - CYA_1581 - carbohydrate ABC transporter permease 1502 60.19 0 1590865..1591914 - 349 86606245 - CYA_1582 - carbohydrate ABC transporter permease 1503 61.68 0 1591904..1593466 - 520 86606246 - CYA_1583 - carbohydrate ABC transporter ATP-binding protein 1504 57.82 0 1593438..1594466 - 342 86606247 - CYA_1584 - Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein 1505 56.40 0 1594890..1596107 + 405 86606248 - CYA_1585 - ISSoc1, transposase 1506 63.37 0 1596165..1597439 + 424 86606249 codA CYA_1587 - cytosine deaminase 1507 60.54 0 1597436..1597876 - 146 86606250 - CYA_1586 - hypothetical protein 1508 62.09 0 1597902..1598534 - 210 86606251 - CYA_1588 - 5-formyltetrahydrofolate cyclo-ligase family protein 1509 60.09 0 1598579..1599034 - 151 86606252 - CYA_1589 - peptidyl-prolyl cis-trans isomerase, FKBP-type 1510 60.90 0 1599102..1599743 - 213 86606253 - CYA_1590 - hypothetical protein 1511 67.63 +1 1599799..1601667 + 622 86606254 cbiG/cobJ-1 CYA_1591 - cbiG protein/precorrin-3B C17-methyltransferase 1512 61.51 0 1601699..1601950 - 83 86606255 - CYA_1592 - hypothetical protein 1513 63.66 0 1602098..1603957 + 619 86606256 - CYA_1593 - NAD(P)H-quinone oxidoreductase subunit F 1514 62.32 0 1603971..1605488 + 505 86606257 - CYA_1594 - NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein 1515 60.79 0 1605542..1606801 + 419 86606258 - CYA_1595 - CO2 hydration protein 1516 64.25 0 1607176..1608336 + 386 86606259 - CYA_1597 - putative soluble hydrogenase, tritium exchange subunit 1517 63.53 0 1608479..1609147 + 222 86606260 - CYA_1598 - phosphotransferase domain-containing protein 1518 61.33 0 1609166..1610215 - 349 86606261 - CYA_1599 - VIC family potassium channel protein 1519 50.70 -2 1610304..1610516 + 70 86606262 - CYA_1600 - hypothetical protein 1520 59.74 0 1610556..1610786 - 76 86606263 - CYA_1601 - hypothetical protein 1521 56.69 0 1610938..1611348 - 136 86606264 petE CYA_1602 - plastocyanin 1522 45.68 -2 1612112..1613059 + 315 86606265 - CYA_1604 - ISSoc4, transposase orfAB 1523 49.40 -2 1613457..1613624 - 55 86606266 - CYA_1605 - hypothetical protein 1524 55.04 -1 1614027..1614413 + 128 86606267 - CYA_1606 - hypothetical protein 1525 56.62 0 1614468..1614686 + 72 86606268 - CYA_1607 - hypothetical protein 1526 63.21 0 1614729..1615568 + 279 86606269 - CYA_1608 - hypothetical protein 1527 62.12 0 1615590..1616315 + 241 86606270 - CYA_1609 - cobalt ABC transporter ATP-binding protein 1528 46.91 -2 1616391..1616552 + 53 86606271 - CYA_1610 - hypothetical protein 1529 61.49 0 1616847..1617155 + 102 86606272 ccmK-1 CYA_1611 - carbon dioxide concentrating mechanism protein CcmK 1530 62.28 0 1617247..1617588 + 113 86606273 ccmK-2 CYA_1612 - carbon dioxide concentrating mechanism protein CcmK 1531 64.00 0 1617589..1617888 + 99 86606274 ccmL CYA_1613 - carbon dioxide concentrating mechanism protein CcmL 1532 63.56 0 1617937..1619901 + 654 86606275 ccmM CYA_1614 - carbon dioxide concentrating mechanism protein CcmM 1533 64.49 0 1619982..1620671 + 229 86606276 - CYA_1615 - hypothetical protein 1534 61.92 0 1620703..1621419 + 238 86606277 - CYA_1616 - microcompartments family protein 1535 60.39 0 1621688..1622101 + 137 86606278 - CYA_1617 - hypothetical protein 1536 57.03 0 1622498..1622881 - 127 86606279 rplS CYA_1619 - 50S ribosomal protein L19 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0