version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1346 58.41 0 1430023..1430361 - 112 86606090 - CYA_1421 - hypothetical protein 1347 59.85 0 1430501..1431175 - 224 86606091 - CYA_1423 - hypothetical protein 1348 59.58 0 1431242..1431622 - 126 86606092 - CYA_1424 - hypothetical protein 1349 73.33 +2 1431698..1431787 - 29 86606093 - CYA_1425 - hypothetical protein 1350 58.33 0 1431851..1432150 - 99 86606094 - CYA_1426 - ferredoxin, 2Fe-2S 1351 52.38 -1 1432352..1432498 + 48 86606095 - CYA_1427 - hypothetical protein 1352 59.55 0 1432665..1434956 + 763 86606096 - CYA_1428 - putative lipoprotein 1353 56.23 0 1435208..1437325 + 705 86606097 - CYA_1430 - putative lipoprotein 1354 53.70 -1 1437306..1437467 - 53 86606098 - CYA_1429 - hypothetical protein 1355 65.48 +1 1437521..1438027 + 168 86606099 - CYA_1431 - pentapeptide repeat-containing protein 1356 57.49 0 1438097..1438597 + 166 86606100 - CYA_1432 - hypothetical protein 1357 62.91 0 1438736..1439401 + 221 86606101 - CYA_1433 - putative lipoprotein 1358 49.46 -2 1439403..1439495 + 30 86606102 - CYA_1434 - hypothetical protein 1359 54.45 -1 1439922..1441664 + 580 86606103 - CYA_1435 - putative lipoprotein 1360 61.74 0 1441806..1443266 - 486 86606104 - CYA_1436 - M8 family peptidase 1361 55.16 -1 1443425..1444693 + 422 86606105 - CYA_1437 - hypothetical protein 1362 55.56 -1 1445169..1446401 - 410 86606106 - CYA_1438 - ISSoc2, transposase 1363 53.03 -1 1446256..1446849 - 197 86606107 - CYA_1439 - ISSoc2, resolvase 1364 54.03 -1 1446917..1447375 - 152 86606108 - CYA_1440 - ISSoc14, transposase, truncation 1365 62.30 0 1447464..1448585 - 373 86606109 - CYA_1441 - carbohydrate ABC transporter ATP-binding protein 1366 55.33 -1 1448815..1449255 - 146 86606110 - CYA_1442 - small heat shock protein (HSP20) family protein 1367 57.69 0 1449434..1449745 - 103 86606111 - CYA_1443 - hypothetical protein 1368 65.26 +1 1449821..1452454 - 877 86606112 acnB CYA_1444 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1369 61.79 0 1452529..1453614 - 361 86606113 prfA CYA_1445 - peptide chain release factor 1 1370 54.95 -1 1453685..1453906 - 73 86606114 rpmE CYA_1446 - 50S ribosomal protein L31 1371 64.98 +1 1453984..1454397 - 137 86606115 rpsI CYA_1447 - 30S ribosomal protein S9 1372 61.40 0 1454394..1454849 - 151 86606116 rplM CYA_1448 - 50S ribosomal protein L13 1373 65.62 +1 1454899..1455762 - 287 86606117 truA CYA_1449 - tRNA pseudouridine synthase A 1374 66.95 +1 1455768..1456118 - 116 86606118 rplQ CYA_1450 - 50S ribosomal protein L17 1375 59.14 0 1456191..1457186 - 331 86606119 rpoA CYA_1451 - DNA-directed RNA polymerase subunit alpha 1376 61.24 0 1457309..1457695 - 128 86606120 rpsK CYA_1452 - 30S ribosomal protein S11 1377 64.06 0 1457784..1458167 - 127 86606121 rpsM CYA_1453 - 30S ribosomal protein S13 1378 63.25 0 1458381..1458497 - 38 86606122 rpmJ CYA_1454 - ribosomal protein L36 1379 67.39 +1 1458692..1460623 + 643 86606123 - CYA_1455 - hypothetical protein 1380 65.80 +1 1460682..1461719 + 345 86606124 - CYA_1456 - hypothetical protein 1381 63.46 0 1461999..1463558 + 519 86606125 - CYA_1457 - dolichyl-phosphate-mannose-protein mannosyltransferase 1382 61.33 0 1463667..1464716 + 349 86606126 - CYA_1458 - oxidoreductase, NAD-binding 1383 63.84 0 1464769..1465722 + 317 86606127 - CYA_1459 - hypothetical protein 1384 62.33 0 1465840..1466739 - 299 86606128 - CYA_1460 - prephenate dehydratase 1385 57.74 0 1466743..1467078 - 111 86606129 - CYA_1461 - competence protein 1386 65.97 +1 1467548..1468837 - 429 86606130 alr CYA_1462 - alanine racemase 1387 62.82 0 1468878..1469918 - 346 86606131 sppA-2 CYA_1463 - signal peptide peptidase SppA, 36K type 1388 63.18 0 1470893..1472410 + 505 86606132 - CYA_1465 - hypothetical protein 1389 66.58 +1 1472452..1474845 + 797 86606133 priA CYA_1466 - primosome assembly protein PriA 1390 59.35 0 1475005..1476111 + 368 86606134 - CYA_1467 - isopropylmalate/isohomocitrate dehydrogenase family protein 1391 65.80 +1 1476143..1477069 - 308 86606135 - CYA_1468 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1392 53.25 -1 1477084..1477329 + 81 86606136 - CYA_1469 - hypothetical protein 1393 63.11 0 1477378..1478613 + 411 86606137 - CYA_1470 - hypothetical protein 1394 55.74 -1 1478619..1479899 - 426 86606138 - CYA_1471 - ISSoc2, transposase 1395 53.40 -1 1479754..1480371 - 205 86606139 - CYA_1472 - ISSoc2, resolvase 1396 63.90 0 1481805..1482455 + 216 86606140 - CYA_1473 - putative cob(I)alamin adenosyltransferase 1397 61.78 0 1482540..1483133 + 197 86606141 dcd CYA_1474 - deoxycytidine triphosphate deaminase 1398 63.56 0 1483225..1484415 + 396 86606142 queA CYA_1476 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1399 62.81 0 1484412..1485188 - 258 86606143 - CYA_1475 - hydrolase, haloacid dehalogenase family protein 1400 63.35 0 1485217..1486212 - 331 86606144 - CYA_1477 - aldo/keto reductase family oxidoreductase 1401 61.71 0 1486245..1486910 + 221 86606145 - CYA_1478 - hypothetical protein 1402 61.59 0 1486962..1488596 + 544 86606146 pyrG CYA_1479 - CTP synthetase 1403 58.82 0 1488628..1488780 - 50 86606147 - CYA_1480 - hypothetical protein 1404 54.30 -1 1488848..1489324 + 158 86606148 - CYA_1481 - hypothetical protein 1405 60.00 0 1489545..1490024 + 159 86606149 - CYA_1482 - peptidylprolyl cis-trans isomerase, cyclophilin-type 1406 65.05 +1 1490111..1491406 + 431 86606150 gvpK CYA_1483 - HAD hydrolase-like protein/gas vesicle protein K 1407 60.90 0 1491527..1493104 + 525 86606151 - CYA_1484 - NAD(P)H-quinone oxidoreductase subunit 2 1408 61.93 0 1493271..1493840 - 189 86606152 ycf4 CYA_1485 - photosystem I assembly protein Ycf4 1409 66.13 +1 1494061..1495182 - 373 86606153 - CYA_1486 - S-layer domain-containing protein 1410 59.68 0 1495170..1495484 - 104 86606154 - CYA_1487 - hypothetical protein 1411 62.46 0 1495536..1496153 - 205 86606155 - CYA_1488 - hypothetical protein 1412 65.48 +1 1496190..1496693 - 167 86606156 - CYA_1489 - hypothetical protein 1413 61.84 0 1496753..1497415 - 220 86606157 - CYA_1490 - RNA polymerase sigma factor RpoE 1414 64.69 +1 1497684..1498391 + 235 86606158 - CYA_1491 - cyclic nucleotide-binding protein 1415 66.67 +1 1498421..1498915 + 164 86606159 - CYA_1492 - hypothetical protein 1416 64.99 +1 1499032..1501002 + 656 86606160 - CYA_1493 - DnaJ domain-containing protein 1417 65.21 +1 1501066..1502028 + 320 86606161 - CYA_1495 - putative transporter 1418 64.89 +1 1501966..1504893 - 975 86606162 - CYA_1494 - sensor histidine kinase 1419 58.24 0 1505050..1505595 - 181 86606163 - CYA_1496 - NADPH-dependent FMN reductase 1420 64.43 0 1505724..1508000 - 758 86606164 - CYA_1497 - hypothetical protein 1421 61.02 0 1508120..1508881 - 253 86606165 - CYA_1498 - hypothetical protein 1422 59.65 0 1508954..1509067 - 37 86606166 - CYA_1499 - hypothetical protein 1423 60.56 0 1509142..1510221 + 359 86606167 fba CYA_1500 - fructose-1,6-bisphosphate aldolase 1424 51.71 -1 1510331..1510564 - 77 86606168 - CYA_1501 - hypothetical protein 1425 53.16 -1 1510605..1510952 - 115 86606169 - CYA_1502 - hypothetical protein 1426 61.55 0 1511145..1511633 - 162 86606170 - CYA_1503 - NifU family SUF system FeS assembly protein 1427 66.80 +1 1511999..1512763 - 254 86606171 cobM CYA_1504 - precorrin-4 C11-methyltransferase 1428 61.30 0 1514374..1515081 - 235 86606172 ispD CYA_1505 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1429 57.92 0 1515231..1516637 - 468 86606173 amt CYA_1507 - ammonium transporter 1430 52.51 -1 1516789..1517127 - 112 86606174 glnB CYA_1508 - nitrogen regulatory protein P-II 1431 61.30 0 1517279..1518694 - 471 86606175 - CYA_1509 - putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein 1432 53.33 -1 1518855..1519064 - 69 86606176 - CYA_1510 - hypothetical protein 1433 58.18 0 1519335..1520312 + 325 86606177 holA CYA_1511 - DNA polymerase III subunit delta 1434 57.68 0 1520399..1521010 - 203 86606178 ctaE CYA_1512 - cytochrome c oxidase, subunit III 1435 59.36 0 1521127..1522836 - 569 86606179 ctaD CYA_1513 - cytochrome c oxidase, subunit I 1436 60.54 0 1522833..1523861 - 342 86606180 ctaC CYA_1514 - cytochrome c oxidase, subunit II 1437 62.61 0 1524408..1525343 + 311 86606181 - CYA_1515 - cytochrome oxidase assembly protein 1438 60.44 0 1525396..1526391 + 331 86606182 cyoE CYA_1517 - protoheme IX farnesyltransferase 1439 62.39 0 1527847..1529391 + 514 86606183 - CYA_1518 - outer membrane efflux family protein 1440 58.17 0 1529634..1530245 - 203 86606184 rpsD CYA_1519 - 30S ribosomal protein S4 1441 61.48 0 1530410..1531546 - 378 86606185 gmd CYA_1520 - GDP-mannose 4,6-dehydratase 1442 65.20 +1 1531693..1533054 - 453 86606186 - CYA_1521 - nicotinate phosphoribosyltransferase 1443 61.84 0 1533207..1534283 + 358 86606187 - CYA_1522 - hypothetical protein 1444 63.91 0 1534364..1535596 + 410 86606188 hisZ CYA_1524 - ATP phosphoribosyltransferase regulatory subunit 1445 61.22 0 1535547..1537475 - 642 86606189 gyrB CYA_1523 - DNA gyrase subunit B 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0