version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1260 63.47 0 1341633..1342853 - 406 86606004 argJ CYA_1327 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1261 61.59 0 1343098..1343904 + 268 86606005 - CYA_1328 - ABC transporter, ATP-binding protein 1262 56.52 0 1344208..1345005 + 265 86606006 - CYA_1329 - ABC transporter, permease protein 1263 61.01 0 1345253..1345906 - 217 86606007 - CYA_1331 - Crp/FNR family transcriptional regulator 1264 59.41 0 1346103..1347674 - 523 86606008 - CYA_1332 - hypothetical protein 1265 61.40 0 1347730..1348299 - 189 86606009 - CYA_1333 - hypothetical protein 1266 64.77 +1 1348335..1349336 - 333 86606010 - CYA_1334 - zinc-binding dehydrogenase family oxidoreductase 1267 64.58 0 1349497..1349640 + 47 86606011 - CYA_1335 - hypothetical protein 1268 65.49 +1 1349640..1350317 + 225 86606012 - CYA_1336 - hypothetical protein 1269 59.52 0 1350319..1350822 - 167 86606013 apcB-1 CYA_1337 - allophycocyanin, beta subunit 1270 65.00 +1 1351048..1351947 - 299 86606014 truB CYA_1338 - tRNA pseudouridine synthase B 1271 63.28 0 1352022..1353053 + 343 86606015 - CYA_1339 - hypothetical protein 1272 59.44 0 1353066..1354061 - 331 86606016 trpS CYA_1340 - tryptophanyl-tRNA synthetase 1273 62.50 0 1354154..1354489 + 111 86606017 - CYA_1341 - hypothetical protein 1274 58.62 0 1354567..1355088 + 173 86606018 ycf3 CYA_1342 - photosystem I assembly protein Ycf3 1275 57.14 0 1355156..1355449 + 97 86606019 gatC CYA_1343 - glutamyl-tRNA(Gln) amidotransferase, C subunit 1276 62.36 0 1356160..1358178 - 672 86606020 tynA CYA_1346 - tyramine oxidase 1277 65.91 +1 1358712..1358843 - 43 86606021 - CYA_1347 - hypothetical protein 1278 59.30 0 1359018..1361663 + 881 86606022 - CYA_1349 - sensory box histidine kinase 1279 61.52 0 1361894..1362340 + 148 86606023 - CYA_1350 - hypothetical protein 1280 63.38 0 1362669..1362881 - 70 86606024 - CYA_1351 - hypothetical protein 1281 65.12 +1 1363311..1364600 - 429 86606025 folC CYA_1353 - folylpolyglutamate synthase 1282 60.98 0 1364668..1366251 - 527 86606026 serA CYA_1354 - D-3-phosphoglycerate dehydrogenase 1283 56.36 0 1366455..1366745 - 96 86606027 - CYA_1355 - hypothetical protein 1284 54.95 -1 1367432..1367542 - 36 86606028 - CYA_1356 - hypothetical protein 1285 46.37 -2 1367795..1368193 + 132 86606029 - CYA_1358 - ISSoc4, transposase orfA 1286 45.68 -2 1368175..1368741 + 188 86606030 - CYA_1360 - ISSoc4, transposase orfB 1287 53.86 -1 1368726..1369295 - 189 86606031 - CYA_1359 - ISSoc5, transposase, truncation 1288 66.01 +1 1369435..1371735 + 766 86606032 purL CYA_1361 - phosphoribosylformylglycinamidine synthase II 1289 61.29 0 1371802..1373232 - 476 86606033 trxB CYA_1362 - thioredoxin-disulfide reductase 1290 58.18 0 1373605..1375029 + 474 86606034 glnA CYA_1363 - glutamine synthetase, type I 1291 51.70 -1 1375295..1375942 + 215 86606035 - CYA_1364 - hypothetical protein 1292 62.62 0 1376021..1376737 + 238 86606036 - CYA_1365 - short chain dehydrogenase/reductase family oxidoreductase 1293 62.20 0 1376917..1378974 + 685 86606037 napA CYA_1366 - monovalent cation:proton antiporter-2 (CPA2) family protein 1294 60.77 0 1379067..1379558 - 163 86606038 - CYA_1367 - hypothetical protein 1295 62.83 0 1379706..1380305 - 199 86606039 recR CYA_1368 - recombination protein RecR 1296 60.12 0 1380327..1380662 - 111 86606040 - CYA_1369 - hypothetical protein 1297 60.20 0 1380830..1381726 + 298 86606041 - CYA_1370 - putative sn-glycerol-3-phosphate ABC transporter, permease protein 1298 64.81 +1 1381763..1383271 + 502 86606042 ubiD CYA_1371 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1299 63.87 0 1383293..1384507 + 404 86606043 - CYA_1372 - arsenite-antimonite (ArsAB) efflux family protein 1300 56.28 0 1384524..1384889 - 121 86606044 - CYA_1373 - hypothetical protein 1301 52.91 -1 1384977..1385594 + 205 86606045 - CYA_1374 - ISSoc2, resolvase 1302 55.66 -1 1385449..1386729 + 426 86606046 - CYA_1375 - ISSoc2, transposase 1303 56.25 0 1386920..1387207 + 95 86606047 - CYA_1376 - hypothetical protein 1304 63.04 0 1387257..1387394 - 45 86606048 - CYA_1377 - hypothetical protein 1305 60.90 0 1387369..1387680 + 103 86606049 - CYA_1378 - hypothetical protein 1306 65.25 +1 1388536..1389240 + 234 86606050 - CYA_1381 - DnaJ domain-containing protein 1307 59.62 0 1389237..1389761 - 174 86606051 - CYA_1380 - hypothetical protein 1308 62.08 0 1389990..1390490 - 166 86606052 - CYA_1382 - hypothetical protein 1309 59.11 0 1390490..1390939 - 149 86606053 - CYA_1383 - FUR family transcriptional regulator 1310 53.40 -1 1390974..1391297 - 107 86606054 - CYA_1384 - hypothetical protein 1311 66.49 +1 1391449..1392576 + 375 86606055 - CYA_1386 - hypothetical protein 1312 61.44 0 1392525..1392830 - 101 86606056 clpS CYA_1385 - ATP-dependent Clp protease adaptor 1313 62.36 0 1393034..1394890 - 618 86606057 - CYA_1387 - hypothetical protein 1314 63.38 0 1394953..1395348 - 131 86606058 - CYA_1388 - hypothetical protein 1315 66.07 +1 1395439..1396113 + 224 86606059 - CYA_1389 - riboflavin biosynthesis protein RibD domain-containing protein 1316 58.47 0 1396327..1396509 - 60 86606060 - CYA_1390 - hypothetical protein 1317 55.22 -1 1396721..1396921 + 66 86606061 - CYA_1391 - hypothetical protein 1318 64.50 0 1397091..1398893 + 600 86606062 - CYA_1393 - TPR repeat-containing protein 1319 60.79 0 1398863..1399594 - 243 86606063 - CYA_1392 - DNA-binding response regulator 1320 63.13 0 1400048..1400953 - 301 86606064 recO CYA_1394 - DNA repair protein RecO 1321 64.25 0 1400950..1401651 - 233 86606065 deoC CYA_1395 - deoxyribose-phosphate aldolase 1322 63.71 0 1401835..1402206 + 123 86606066 - CYA_1396 - hypothetical protein 1323 63.45 0 1402203..1402730 + 175 86606067 - CYA_1397 - hypothetical protein 1324 60.41 0 1402734..1404284 - 516 86606068 metG CYA_1398 - methionyl-tRNA synthetase 1325 62.71 0 1404262..1406232 + 656 86606069 - CYA_1399 - hypothetical protein 1326 64.83 +1 1406262..1406588 + 108 86606070 - CYA_1400 - hypothetical protein 1327 63.93 0 1406653..1407894 + 413 86606071 - CYA_1401 - hypothetical protein 1328 61.50 0 1407996..1408382 - 128 86606072 - CYA_1402 - hypothetical protein 1329 64.16 0 1408487..1409005 + 172 86606073 petC CYA_1403 - cytochrome b6-f complex iron-sulfur subunit 1330 61.99 0 1409483..1410466 + 327 86606074 petA CYA_1404 - apocytochrome f 1331 63.10 0 1410528..1411340 - 270 86606075 - CYA_1405 - PhzF family phenazine biosynthesis protein 1332 58.65 0 1411585..1411896 + 103 86606076 groES CYA_1406 - co-chaperonin GroES 1333 61.22 0 1411963..1413597 + 544 86606077 groEL CYA_1407 - chaperonin GroEL 1334 65.10 +1 1413771..1414598 + 275 86606078 - CYA_1408 - hypothetical protein 1335 64.35 0 1414754..1415917 + 387 86606079 - CYA_1409 - inositol-5-monophosphate dehydrogenase 1336 55.29 -1 1416275..1417909 + 544 86606080 - CYA_1411 - S-layer domain-containing protein 1337 56.99 0 1418354..1419934 + 526 86606081 - CYA_1412 - putative S-layer protein 1338 60.83 0 1420078..1420917 - 279 86606082 - CYA_1413 - hypothetical protein 1339 62.78 0 1420985..1422682 - 565 86606083 - CYA_1414 - SulP family sulfate permease 1340 63.48 0 1422999..1425539 + 846 86606084 gyrA CYA_1415 - DNA gyrase subunit A 1341 58.59 0 1425730..1426125 + 131 86606085 - CYA_1416 - hypothetical protein 1342 68.96 +1 1426263..1427396 + 377 86606086 - CYA_1417 - glycerate kinase 1343 54.60 -1 1427568..1427882 + 104 86606087 psbW CYA_1418 - photosystem II reaction center protein Psb28 1344 63.20 0 1427888..1429417 - 509 86606088 gatA CYA_1419 - aspartyl/glutamyl-tRNA amidotransferase subunit A 1345 61.32 0 1429598..1429915 - 105 86606089 - CYA_1420 - hypothetical protein 1346 58.41 0 1430023..1430361 - 112 86606090 - CYA_1421 - hypothetical protein 1347 59.85 0 1430501..1431175 - 224 86606091 - CYA_1423 - hypothetical protein 1348 59.58 0 1431242..1431622 - 126 86606092 - CYA_1424 - hypothetical protein 1349 73.33 +2 1431698..1431787 - 29 86606093 - CYA_1425 - hypothetical protein 1350 58.33 0 1431851..1432150 - 99 86606094 - CYA_1426 - ferredoxin, 2Fe-2S 1351 52.38 -1 1432352..1432498 + 48 86606095 - CYA_1427 - hypothetical protein 1352 59.55 0 1432665..1434956 + 763 86606096 - CYA_1428 - putative lipoprotein 1353 56.23 0 1435208..1437325 + 705 86606097 - CYA_1430 - putative lipoprotein 1354 53.70 -1 1437306..1437467 - 53 86606098 - CYA_1429 - hypothetical protein 1355 65.48 +1 1437521..1438027 + 168 86606099 - CYA_1431 - pentapeptide repeat-containing protein 1356 57.49 0 1438097..1438597 + 166 86606100 - CYA_1432 - hypothetical protein 1357 62.91 0 1438736..1439401 + 221 86606101 - CYA_1433 - putative lipoprotein 1358 49.46 -2 1439403..1439495 + 30 86606102 - CYA_1434 - hypothetical protein 1359 54.45 -1 1439922..1441664 + 580 86606103 - CYA_1435 - putative lipoprotein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0