version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1184 63.15 0 1255463..1256599 - 378 86605926 gcvT CYA_1242 - glycine cleavage system aminomethyltransferase T 1185 60.23 0 1256666..1257100 + 144 86605927 gloA CYA_1244 - lactoylglutathione lyase 1186 66.76 +1 1257125..1258216 - 363 86605928 - CYA_1245 - TonB family protein 1187 61.04 0 1258476..1258955 + 159 86605929 - CYA_1246 - glyoxalase family protein 1188 63.29 0 1258973..1259830 + 285 86605930 - CYA_1247 - hypothetical protein 1189 62.97 0 1260709..1261710 + 333 86605931 menC CYA_1249 - O-succinylbenzoate synthase 1190 56.20 0 1263140..1263502 + 120 86605933 - CYA_1251 - hypothetical protein 1191 61.05 0 1263499..1264620 - 373 86605934 - CYA_1250 - putative methyl-accepting chemotaxis protein 1192 59.30 0 1264886..1266106 - 406 86605935 - CYA_1252 - GAF domain-containing protein 1193 60.91 0 1266259..1266936 + 225 86605936 pth CYA_1253 - peptidyl-tRNA hydrolase 1194 61.99 0 1266981..1268219 - 412 86605937 - CYA_1254 - hypothetical protein 1195 58.82 0 1268403..1269422 - 339 86605938 - CYA_1255 - hypothetical protein 1196 62.36 0 1270024..1272645 - 873 86605939 leuS CYA_1256 - leucyl-tRNA synthetase 1197 59.03 0 1272774..1273664 - 296 86605940 petH CYA_1257 - ferredoxin--NADP reductase 1198 58.43 0 1273982..1274989 + 335 86605941 prk CYA_1258 - phosphoribulokinase 1199 64.21 0 1275064..1275795 + 243 86605942 pgl CYA_1259 - 6-phosphogluconolactonase 1200 53.22 -1 1275911..1276081 + 56 86605943 - CYA_1260 - hypothetical protein 1201 64.14 0 1277778..1278923 + 381 86605944 - CYA_1262 - hypothetical protein 1202 59.57 0 1279028..1279534 + 168 86605945 - CYA_1263 - hypothetical protein 1203 61.62 0 1279684..1280436 + 250 86605946 minC CYA_1264 - septum formation inhibitor 1204 59.73 0 1280433..1281239 + 268 86605947 minD CYA_1265 - septum site-determining protein MinD 1205 61.98 0 1281330..1281692 + 120 86605948 minE CYA_1266 - cell division topological specificity factor MinE 1206 64.06 0 1281926..1284115 + 729 86605949 - CYA_1268 - monovalent cation:proton antiporter-2 (CPA2) family protein 1207 64.06 0 1284112..1284456 - 114 86605950 - CYA_1267 - hypothetical protein 1208 67.81 +1 1284501..1285112 - 203 86605951 - CYA_1269 - hypothetical protein 1209 64.89 +1 1285137..1286150 - 337 86605952 holB CYA_1270 - DNA polymerase III subunit delta' 1210 60.62 0 1286275..1286754 - 159 86605953 accB CYA_1271 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1211 56.45 0 1286822..1287379 - 185 86605954 efp CYA_1272 - elongation factor P 1212 65.06 +1 1287416..1288099 - 227 86605955 - CYA_1273 - glycoprotease family protein 1213 58.78 0 1288198..1289262 + 354 86605956 psbA-1 CYA_1274 - photosystem II protein D1 1214 61.74 0 1289332..1289757 - 141 86605957 - CYA_1275 - hypothetical protein 1215 63.33 0 1289747..1289896 + 49 86605958 - CYA_1276 - hypothetical protein 1216 45.68 -2 1290363..1291310 - 315 86605961 - CYA_1279 - ISSoc4, transposase orfAB 1217 58.54 0 1291390..1291635 + 81 86605962 - CYA_1281 - hypothetical protein 1218 61.47 0 1291474..1291935 - 153 86605963 - CYA_1280 - TatC family protein, truncation 1219 61.86 0 1292098..1293303 - 401 86605964 - CYA_1282 - polar amino acid ABC transporter permease 1220 61.81 0 1293307..1294479 - 390 86605965 - CYA_1283 - polar amino acid ABC transporter permease 1221 60.02 0 1294588..1295625 - 345 86605966 - CYA_1284 - polar amino acid ABC transporter amino acid-binding protein 1222 55.89 0 1295889..1296677 + 262 86605967 - CYA_1285 - polar amino acid ABC transporter ATP-binding protein 1223 61.48 0 1296686..1297534 - 282 86605968 - CYA_1286 - hypothetical protein 1224 56.94 0 1297563..1297778 + 71 86605969 - CYA_1287 - hypothetical protein 1225 62.65 0 1299385..1300230 + 281 86605970 trpA-2 CYA_1290 - tryptophan synthase subunit alpha 1226 45.68 -2 1300215..1300781 - 188 86605971 - CYA_1289 - ISSoc4, transposase orfB 1227 46.12 -2 1300763..1301161 - 132 86605972 - CYA_1291 - ISSoc4, transposase orfA 1228 58.92 0 1301241..1301537 + 98 86605973 - CYA_1292 - hypothetical protein 1229 59.81 0 1301518..1304331 + 937 86605974 - CYA_1293 - putative type III restriction-modification system, res subunit 1230 59.72 0 1304681..1305313 + 210 86605975 - CYA_1294 - anaerobic ribonucleotide reductase activating protein 1231 60.35 0 1305333..1305617 - 94 86605976 - CYA_1295 - hypothetical protein 1232 57.96 0 1305857..1306660 + 267 86605977 - CYA_1296 - stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein 1233 59.53 0 1306701..1307639 + 312 86605978 - CYA_1297 - HflC/HflK family protein 1234 64.68 +1 1307640..1308344 - 234 86605979 - CYA_1298 - ComF family protein 1235 60.05 0 1308542..1308949 + 135 86605980 rpsL CYA_1299 - 30S ribosomal protein S12 1236 60.93 0 1308993..1309463 + 156 86605981 rpsG CYA_1300 - 30S ribosomal protein S7 1237 59.63 0 1309620..1311752 + 710 86605982 fusA CYA_1301 - elongation factor G 1238 61.06 0 1311775..1313004 + 409 86605983 tuf CYA_1302 - elongation factor Tu 1239 56.92 0 1313098..1313415 + 105 86605984 rpsJ CYA_1303 - 30S ribosomal protein S10 1240 64.40 0 1313462..1314343 + 293 86605985 dapB CYA_1305 - dihydrodipicolinate reductase 1241 66.23 +1 1314340..1315251 - 303 86605986 - CYA_1304 - methylenetetrahydrofolate reductase family protein 1242 66.27 +1 1315337..1316857 - 506 86605987 - CYA_1306 - hypothetical protein 1243 62.70 0 1317026..1317757 - 243 86605988 - CYA_1307 - hypothetical protein 1244 65.79 +1 1318030..1319391 - 453 86605989 - CYA_1308 - oxidoreductase, FAD-dependent 1245 67.88 +1 1319466..1319630 - 54 86605990 - CYA_1309 - hypothetical protein 1246 58.88 0 1319891..1320673 - 260 86605991 tatC CYA_1310 - Sec-independent protein translocase TatC 1247 45.87 -2 1321050..1321982 + 310 86605992 - CYA_1311 - ISSoc4, transposase orfAB 1248 58.57 0 1322087..1322407 - 106 86605993 - CYA_1312 - nucleotidyltransferase domain-containing protein 1249 56.46 0 1322404..1322736 - 110 90296795 - CYA_1313 - putative DNA methyltransferase 1250 67.11 +1 1326864..1329119 - 751 86605994 - CYA_1316 - DNA internalization competence protein 1251 58.80 0 1329550..1329765 + 71 86605995 - CYA_1317 - hypothetical protein 1252 66.90 +1 1329842..1330684 + 280 86605996 gspO CYA_1318 - prepilin peptidase 1253 62.68 0 1330745..1334707 - 1320 86605997 chlH CYA_1319 - magnesium chelatase 1254 56.54 0 1336315..1338645 - 776 86605998 pcrA CYA_1321 - ATP-dependent DNA helicase PcrA 1255 57.30 0 1338793..1339422 + 209 86605999 - CYA_1322 - hypothetical protein 1256 61.09 0 1339537..1340181 + 214 86606000 - CYA_1323 - hypothetical protein 1257 65.62 +1 1340188..1341045 - 285 86606001 dapF CYA_1324 - diaminopimelate epimerase 1258 53.79 -1 1341084..1341215 - 43 86606002 psbN CYA_1325 - photosystem II reaction center protein N 1259 55.88 0 1341406..1341609 + 67 86606003 psbH CYA_1326 - photosystem II reaction center protein H 1260 63.47 0 1341633..1342853 - 406 86606004 argJ CYA_1327 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1261 61.59 0 1343098..1343904 + 268 86606005 - CYA_1328 - ABC transporter, ATP-binding protein 1262 56.52 0 1344208..1345005 + 265 86606006 - CYA_1329 - ABC transporter, permease protein 1263 61.01 0 1345253..1345906 - 217 86606007 - CYA_1331 - Crp/FNR family transcriptional regulator 1264 59.41 0 1346103..1347674 - 523 86606008 - CYA_1332 - hypothetical protein 1265 61.40 0 1347730..1348299 - 189 86606009 - CYA_1333 - hypothetical protein 1266 64.77 +1 1348335..1349336 - 333 86606010 - CYA_1334 - zinc-binding dehydrogenase family oxidoreductase 1267 64.58 0 1349497..1349640 + 47 86606011 - CYA_1335 - hypothetical protein 1268 65.49 +1 1349640..1350317 + 225 86606012 - CYA_1336 - hypothetical protein 1269 59.52 0 1350319..1350822 - 167 86606013 apcB-1 CYA_1337 - allophycocyanin, beta subunit 1270 65.00 +1 1351048..1351947 - 299 86606014 truB CYA_1338 - tRNA pseudouridine synthase B 1271 63.28 0 1352022..1353053 + 343 86606015 - CYA_1339 - hypothetical protein 1272 59.44 0 1353066..1354061 - 331 86606016 trpS CYA_1340 - tryptophanyl-tRNA synthetase 1273 62.50 0 1354154..1354489 + 111 86606017 - CYA_1341 - hypothetical protein 1274 58.62 0 1354567..1355088 + 173 86606018 ycf3 CYA_1342 - photosystem I assembly protein Ycf3 1275 57.14 0 1355156..1355449 + 97 86606019 gatC CYA_1343 - glutamyl-tRNA(Gln) amidotransferase, C subunit 1276 62.36 0 1356160..1358178 - 672 86606020 tynA CYA_1346 - tyramine oxidase 1277 65.91 +1 1358712..1358843 - 43 86606021 - CYA_1347 - hypothetical protein 1278 59.30 0 1359018..1361663 + 881 86606022 - CYA_1349 - sensory box histidine kinase 1279 61.52 0 1361894..1362340 + 148 86606023 - CYA_1350 - hypothetical protein 1280 63.38 0 1362669..1362881 - 70 86606024 - CYA_1351 - hypothetical protein 1281 65.12 +1 1363311..1364600 - 429 86606025 folC CYA_1353 - folylpolyglutamate synthase 1282 60.98 0 1364668..1366251 - 527 86606026 serA CYA_1354 - D-3-phosphoglycerate dehydrogenase 1283 56.36 0 1366455..1366745 - 96 86606027 - CYA_1355 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0