version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1140 55.56 -1 1209115..1209447 + 110 86605882 cbbS CYA_1196 - ribulose bisphosphate carboxylase, small subunit 1141 63.94 0 1209705..1210511 - 268 86605883 - CYA_1197 - hypothetical protein 1142 61.14 0 1210661..1211167 + 168 86605884 - CYA_1200 - hypothetical protein 1143 59.96 0 1210709..1211260 - 183 86605885 - CYA_1199 - hypothetical protein 1144 61.86 0 1211787..1212764 + 325 86605886 - CYA_1201 - PhoH family protein 1145 63.09 0 1212761..1213486 + 241 86605887 - CYA_1203 - haloacid dehalogenase, IA family protein 1146 64.39 0 1213464..1214252 - 262 86605888 - CYA_1202 - alpha/beta fold family hydrolase 1147 63.98 0 1214240..1214983 - 247 86605889 - CYA_1204 - acyltransferase family protein 1148 62.26 0 1214995..1216128 - 377 86605890 cobO-2 CYA_1205 - hypothetical protein 1149 62.95 0 1216339..1217253 + 304 86605891 - CYA_1206 - putative cysteine synthase B 1150 64.23 0 1217481..1217972 - 163 86605892 - CYA_1208 - pentapeptide repeat-containing protein 1151 61.59 0 1218655..1219383 + 242 86605893 - CYA_1209 - hydrophobic amino acid uptake transporter ABC transporter family ATP-binding protein 1152 63.66 0 1219396..1220859 - 487 86605894 - CYA_1210 - pyruvate kinase 1153 61.51 0 1221034..1222236 + 400 86605895 - CYA_1211 - YjgP/YjgQ permease 1154 63.12 0 1222248..1223261 - 337 86605896 - CYA_1212 - phosphate ABC transporter substrate-binding protein 1155 62.43 0 1223354..1225405 - 683 86605897 - CYA_1213 - VacB/RNB family exoribonuclease 1156 57.82 0 1225785..1226417 + 210 86605898 - CYA_1214 - LuxR family DNA-binding response regulator 1157 62.28 0 1226617..1227825 + 402 86605899 - CYA_1215 - coenzyme F420 hydrogenase/dehydrogenase family protein 1158 64.83 +1 1227848..1229044 - 398 86605900 - CYA_1216 - aspartate aminotransferase 1159 62.61 0 1229210..1230589 + 459 86605901 engA CYA_1217 - GTP-binding protein EngA 1160 62.37 0 1230625..1231089 + 154 86605902 smpB CYA_1218 - SsrA-binding protein 1161 59.70 0 1231275..1231877 - 200 86605903 - CYA_1219 - glutathione S-transferase 1162 66.11 +1 1231949..1233025 - 358 86605904 era CYA_1220 - GTP-binding protein Era 1163 63.16 0 1233034..1234773 - 579 86605905 - CYA_1221 - SpoIID/LytB domain-containing protein 1164 53.83 -1 1235330..1235773 - 147 86605906 - CYA_1223 - putative Bdr protein 1165 62.35 0 1235827..1236822 - 331 86605907 - CYA_1224 - AAA family ATPase 1166 60.77 0 1236952..1237392 + 146 86605908 - CYA_1226 - rrf2 family protein 1167 56.60 0 1237389..1237547 - 52 86605909 - CYA_1225 - hypothetical protein 1168 59.89 0 1237546..1238460 + 304 86605910 - CYA_1227 - putative ribosomal protein S1 1169 63.80 0 1238961..1240181 + 406 86605911 - CYA_1228 - putative S-layer protein 1170 60.44 0 1240339..1240980 - 213 86605912 - CYA_1229 - ExoD family protein 1171 59.68 0 1241544..1242302 - 252 86605913 - CYA_1230 - GvpL/GvpF family gas vesicle protein 1172 59.54 0 1242268..1243389 - 373 86605914 - CYA_1231 - nucleotidyl transferase family protein 1173 63.73 0 1243652..1244401 + 249 86605915 hisG CYA_1232 - ATP phosphoribosyltransferase catalytic subunit 1174 62.14 0 1244601..1245395 + 264 86605916 psbO CYA_1233 - photosystem II manganese-stabilizing protein 1175 56.38 0 1245414..1245695 + 93 86605917 - CYA_1234 - hypothetical protein 1176 62.03 0 1246105..1247484 + 459 86605918 - CYA_1235 - putative lipoprotein 1177 64.27 0 1247523..1247939 + 138 86605919 - CYA_1236 - hypothetical protein 1178 66.49 +1 1247911..1249035 + 374 86605920 - CYA_1237 - polyamine ABC transporter, polyamine-binding protein 1179 60.63 0 1249105..1250778 - 557 86605921 tig CYA_1238 - trigger factor 1180 57.81 0 1250867..1251250 - 127 86605922 - CYA_1239 - hypothetical protein 1181 61.55 0 1251335..1252369 - 344 86605923 - CYA_1240 - cytochrome c assembly protein 1182 64.64 +1 1252474..1253853 + 459 86605924 - CYA_1241 - hypothetical protein 1183 60.82 0 1254523..1255479 + 318 86605925 - CYA_1243 - RNA polymerase sigma factor 1184 63.15 0 1255463..1256599 - 378 86605926 gcvT CYA_1242 - glycine cleavage system aminomethyltransferase T 1185 60.23 0 1256666..1257100 + 144 86605927 gloA CYA_1244 - lactoylglutathione lyase 1186 66.76 +1 1257125..1258216 - 363 86605928 - CYA_1245 - TonB family protein 1187 61.04 0 1258476..1258955 + 159 86605929 - CYA_1246 - glyoxalase family protein 1188 63.29 0 1258973..1259830 + 285 86605930 - CYA_1247 - hypothetical protein 1189 62.97 0 1260709..1261710 + 333 86605931 menC CYA_1249 - O-succinylbenzoate synthase 1190 56.20 0 1263140..1263502 + 120 86605933 - CYA_1251 - hypothetical protein 1191 61.05 0 1263499..1264620 - 373 86605934 - CYA_1250 - putative methyl-accepting chemotaxis protein 1192 59.30 0 1264886..1266106 - 406 86605935 - CYA_1252 - GAF domain-containing protein 1193 60.91 0 1266259..1266936 + 225 86605936 pth CYA_1253 - peptidyl-tRNA hydrolase 1194 61.99 0 1266981..1268219 - 412 86605937 - CYA_1254 - hypothetical protein 1195 58.82 0 1268403..1269422 - 339 86605938 - CYA_1255 - hypothetical protein 1196 62.36 0 1270024..1272645 - 873 86605939 leuS CYA_1256 - leucyl-tRNA synthetase 1197 59.03 0 1272774..1273664 - 296 86605940 petH CYA_1257 - ferredoxin--NADP reductase 1198 58.43 0 1273982..1274989 + 335 86605941 prk CYA_1258 - phosphoribulokinase 1199 64.21 0 1275064..1275795 + 243 86605942 pgl CYA_1259 - 6-phosphogluconolactonase 1200 53.22 -1 1275911..1276081 + 56 86605943 - CYA_1260 - hypothetical protein 1201 64.14 0 1277778..1278923 + 381 86605944 - CYA_1262 - hypothetical protein 1202 59.57 0 1279028..1279534 + 168 86605945 - CYA_1263 - hypothetical protein 1203 61.62 0 1279684..1280436 + 250 86605946 minC CYA_1264 - septum formation inhibitor 1204 59.73 0 1280433..1281239 + 268 86605947 minD CYA_1265 - septum site-determining protein MinD 1205 61.98 0 1281330..1281692 + 120 86605948 minE CYA_1266 - cell division topological specificity factor MinE 1206 64.06 0 1281926..1284115 + 729 86605949 - CYA_1268 - monovalent cation:proton antiporter-2 (CPA2) family protein 1207 64.06 0 1284112..1284456 - 114 86605950 - CYA_1267 - hypothetical protein 1208 67.81 +1 1284501..1285112 - 203 86605951 - CYA_1269 - hypothetical protein 1209 64.89 +1 1285137..1286150 - 337 86605952 holB CYA_1270 - DNA polymerase III subunit delta' 1210 60.62 0 1286275..1286754 - 159 86605953 accB CYA_1271 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1211 56.45 0 1286822..1287379 - 185 86605954 efp CYA_1272 - elongation factor P 1212 65.06 +1 1287416..1288099 - 227 86605955 - CYA_1273 - glycoprotease family protein 1213 58.78 0 1288198..1289262 + 354 86605956 psbA-1 CYA_1274 - photosystem II protein D1 1214 61.74 0 1289332..1289757 - 141 86605957 - CYA_1275 - hypothetical protein 1215 63.33 0 1289747..1289896 + 49 86605958 - CYA_1276 - hypothetical protein 1216 45.68 -2 1290363..1291310 - 315 86605961 - CYA_1279 - ISSoc4, transposase orfAB 1217 58.54 0 1291390..1291635 + 81 86605962 - CYA_1281 - hypothetical protein 1218 61.47 0 1291474..1291935 - 153 86605963 - CYA_1280 - TatC family protein, truncation 1219 61.86 0 1292098..1293303 - 401 86605964 - CYA_1282 - polar amino acid ABC transporter permease 1220 61.81 0 1293307..1294479 - 390 86605965 - CYA_1283 - polar amino acid ABC transporter permease 1221 60.02 0 1294588..1295625 - 345 86605966 - CYA_1284 - polar amino acid ABC transporter amino acid-binding protein 1222 55.89 0 1295889..1296677 + 262 86605967 - CYA_1285 - polar amino acid ABC transporter ATP-binding protein 1223 61.48 0 1296686..1297534 - 282 86605968 - CYA_1286 - hypothetical protein 1224 56.94 0 1297563..1297778 + 71 86605969 - CYA_1287 - hypothetical protein 1225 62.65 0 1299385..1300230 + 281 86605970 trpA-2 CYA_1290 - tryptophan synthase subunit alpha 1226 45.68 -2 1300215..1300781 - 188 86605971 - CYA_1289 - ISSoc4, transposase orfB 1227 46.12 -2 1300763..1301161 - 132 86605972 - CYA_1291 - ISSoc4, transposase orfA 1228 58.92 0 1301241..1301537 + 98 86605973 - CYA_1292 - hypothetical protein 1229 59.81 0 1301518..1304331 + 937 86605974 - CYA_1293 - putative type III restriction-modification system, res subunit 1230 59.72 0 1304681..1305313 + 210 86605975 - CYA_1294 - anaerobic ribonucleotide reductase activating protein 1231 60.35 0 1305333..1305617 - 94 86605976 - CYA_1295 - hypothetical protein 1232 57.96 0 1305857..1306660 + 267 86605977 - CYA_1296 - stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein 1233 59.53 0 1306701..1307639 + 312 86605978 - CYA_1297 - HflC/HflK family protein 1234 64.68 +1 1307640..1308344 - 234 86605979 - CYA_1298 - ComF family protein 1235 60.05 0 1308542..1308949 + 135 86605980 rpsL CYA_1299 - 30S ribosomal protein S12 1236 60.93 0 1308993..1309463 + 156 86605981 rpsG CYA_1300 - 30S ribosomal protein S7 1237 59.63 0 1309620..1311752 + 710 86605982 fusA CYA_1301 - elongation factor G 1238 61.06 0 1311775..1313004 + 409 86605983 tuf CYA_1302 - elongation factor Tu 1239 56.92 0 1313098..1313415 + 105 86605984 rpsJ CYA_1303 - 30S ribosomal protein S10 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0