version 1.0
Synechococcus sp. JA-3-3Ab, complete genome - 1..2932766 2760 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 59 64.25 0 59052..59795 - 247 86604792 - CYA_0060 - hypothetical protein 60 58.08 0 59792..60373 - 193 86604793 - CYA_0061 - RNA polymerase sigma factor 61 61.96 0 60603..61409 - 268 86604794 - CYA_0062 - putative lipoprotein 62 57.26 0 61552..61668 - 38 86604795 - CYA_0063 - hypothetical protein 63 58.75 0 61714..62496 - 260 86604796 - CYA_0064 - hypothetical protein 64 58.20 0 62514..63257 - 247 86604797 - CYA_0065 - hypothetical protein 65 59.47 0 63306..63791 - 161 86604798 - CYA_0066 - FHA domain-containing protein 66 51.78 -1 65283..65759 + 158 86604799 - CYA_0068 - ISSoc3, orfA transposase 67 60.75 0 66081..66722 + 213 86604800 - CYA_0069 - hypothetical protein 68 62.74 0 66762..67652 + 296 86604801 - CYA_0070 - hypothetical protein 69 59.79 0 68588..69808 + 406 86604802 chlP CYA_0072 - geranylgeranyl reductase 70 60.40 0 69815..70660 - 281 86604803 - CYA_0073 - hypothetical protein 71 61.84 0 71021..72367 + 448 86604804 secD CYA_0074 - preprotein translocase subunit SecD 72 60.54 0 72364..73359 + 331 86604805 secF CYA_0075 - preprotein translocase subunit SecF 73 67.01 +1 73398..75167 - 589 86604806 - CYA_0076 - hypothetical protein 74 62.48 0 75903..77240 + 445 86604807 murF CYA_0077 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 75 55.86 0 77338..77559 + 73 86604808 - CYA_0078 - hypothetical protein 76 57.54 0 77913..78449 + 178 86604809 - CYA_0079 - fasciclin domain-containing protein 77 57.94 0 78557..79003 - 148 86604810 - CYA_0080 - hypothetical protein 78 64.83 +1 79112..80905 + 597 86604811 menD CYA_0082 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 79 64.71 +1 80829..81851 - 340 86604812 miaA CYA_0081 - tRNA delta(2)-isopentenylpyrophosphate transferase 80 62.53 0 82003..82824 + 273 86604813 - CYA_0083 - hypothetical protein 81 62.03 0 82982..83692 - 236 86604814 rpe CYA_0084 - ribulose-phosphate 3-epimerase 82 60.22 0 83852..84037 - 61 86604815 - CYA_0085 - hypothetical protein 83 63.99 0 84185..84595 + 136 86604816 - CYA_0086 - glyoxalase family protein 84 66.67 +1 84592..86178 + 528 86604817 - CYA_0088 - carbohydrate kinase family protein 85 62.94 0 86175..87005 - 276 86604818 - CYA_0087 - putative undecaprenol kinase 86 61.84 0 87209..87829 - 206 86604819 - CYA_0089 - hypothetical protein 87 53.23 -1 88002..88187 - 61 86604820 - CYA_0090 - hypothetical protein 88 59.14 0 88306..89487 - 393 86604821 - CYA_0091 - ISSoc1, transposase 89 59.45 0 89675..90367 - 230 86604822 - CYA_0092 - hypothetical protein 90 55.56 -1 90367..91023 - 218 86604823 - CYA_0093 - response regulator 91 59.96 0 91262..92380 + 372 86604824 - CYA_0094 - UbiE/COQ5 family methlytransferase 92 60.40 0 92497..92991 + 164 86604825 - CYA_0095 - hypothetical protein 93 59.13 0 93105..93449 + 114 86604826 - CYA_0096 - hypothetical protein 94 63.97 0 93643..95199 + 518 86604827 - CYA_0097 - major facilitator transporter 95 58.82 0 95249..95350 + 33 86604828 - CYA_0098 - hypothetical protein 96 62.80 0 95382..96572 + 396 86604829 - CYA_0099 - glycosyl transferase, group 1 97 61.92 0 96917..98413 + 498 86604830 - CYA_0100 - GAF/SpoIIE domain-containing protein 98 57.53 0 98507..98725 + 72 86604831 - CYA_0102 - hypothetical protein 99 61.11 0 98709..98816 - 35 86604832 - CYA_0101 - hypothetical protein 100 62.65 0 98857..100326 + 489 86604833 argH CYA_0103 - argininosuccinate lyase 101 61.19 0 100418..101038 + 206 86604834 - CYA_0104 - hypothetical protein 102 59.92 0 101454..101705 + 83 86604835 - CYA_0105 - hypothetical protein 103 62.59 0 101922..103049 + 375 86604836 - CYA_0107 - UDP-N-acetylglucosamine 2-epimerase 104 56.59 0 103038..103166 - 42 86604837 - CYA_0106 - hypothetical protein 105 57.03 0 103453..103701 - 82 86604838 - CYA_0108 - hypothetical protein 106 62.39 0 104219..105340 + 373 86604839 ftsZ CYA_0109 - cell division protein FtsZ 107 64.61 0 105410..106381 + 323 86604840 ddlB CYA_0110 - D-alanine--D-alanine ligase B 108 62.42 0 106401..106871 - 156 86604841 - CYA_0111 - hypothetical protein 109 58.71 0 107039..107704 + 221 86604842 chlM CYA_0112 - Mg-protoporphyrin IX methyl transferase 110 62.78 0 107756..108475 - 239 86604843 - CYA_0113 - HEAT repeat-containing PBS lyase 111 62.52 0 108623..109369 - 248 86604844 - CYA_0114 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 112 61.64 0 109442..110236 - 264 86604845 - CYA_0115 - hypothetical protein 113 61.80 0 110298..111221 - 307 86604846 - CYA_0116 - hypothetical protein 114 59.38 0 111443..113350 + 635 86604847 - CYA_0117 - endonuclease/exonuclease/phosphatase family protein 115 63.27 0 113491..114609 - 372 86604848 cbiD CYA_0118 - cobalt-precorrin-6A synthase 116 57.63 0 114833..115186 + 117 86604849 - CYA_0119 - hypothetical protein 117 60.64 0 115188..115784 - 198 86604850 def CYA_0120 - peptide deformylase 118 55.77 0 116244..116555 - 103 86604851 - CYA_0121 - hypothetical protein 119 61.47 0 116559..116885 - 108 86604852 - CYA_0122 - hypothetical protein 120 56.50 0 116885..117061 - 58 86604853 - CYA_0123 - phycobilisome degradation family protein 121 46.77 -2 117159..117344 - 61 86604854 - CYA_0124 - hypothetical protein 122 54.76 -1 117441..117692 + 83 86604855 - CYA_0125 - putative RNA-binding protein 123 61.30 0 117811..119115 + 434 86604856 - CYA_0126 - putative nuclease SbcCD, D subunit 124 53.25 -1 119457..119702 + 81 86604857 - CYA_0127 - hypothetical protein 125 63.19 0 119962..121887 - 641 86604858 speA CYA_0128 - arginine decarboxylase 126 65.71 +1 122379..123428 + 349 86604859 pstS-1 CYA_0129 - phosphate ABC transporter, phosphate-binding protein 127 62.64 0 123678..125564 + 628 86604860 dnaK-1 CYA_0130 - molecular chaperone DnaK 128 59.75 0 125763..126731 + 322 86604861 - CYA_0132 - DnaJ family protein 129 64.33 0 126728..128053 - 441 86604862 - CYA_0131 - putative glycolate oxidase, iron-sulfur subunit 130 63.24 0 128274..128594 + 106 86604863 - CYA_0134 - hypothetical protein 131 62.09 0 128591..130471 - 626 86604864 - CYA_0133 - long-chain-fatty-acid-CoA ligase-like protein 132 59.05 0 130865..131179 - 104 86604865 cas2-1 CYA_0135 - CRISPR-associated Cas2 family protein 133 63.14 0 131558..133147 - 529 86604867 - CYA_0137 - hypothetical protein 134 54.42 -1 134068..134361 - 97 86604868 - CYA_0138 - hypothetical protein 135 61.08 0 134674..135246 - 190 86604869 - CYA_0139 - hypothetical protein 136 60.75 0 135265..135906 - 213 86604870 - CYA_0140 - hypothetical protein 137 58.11 0 136943..137164 - 73 86604871 - CYA_0142 - CAB/ELIP/HLIP family protein 138 63.16 0 137266..138777 - 503 86604872 ilvA CYA_0143 - threonine dehydratase 139 63.98 0 138937..139419 + 160 86604873 - CYA_0144 - pyridoxamine 5'-phosphate oxidase family protein 140 65.89 +1 139456..140352 - 298 86604874 - CYA_0145 - alpha/beta fold family hydrolase 141 62.70 0 140472..141203 + 243 86604875 - CYA_0146 - WecB/TagA/CpsF family glycosyl transferase 142 63.03 0 141729..142415 + 228 86604876 ftsE CYA_0147 - cell division ATP-binding protein FtsE 143 58.63 0 142592..144856 - 754 86604877 metE-1 CYA_0148 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 144 55.78 0 145761..147386 + 541 86604878 - CYA_0149 - peptide/opine/nickel ABC transporter substrate-binding protein 145 56.49 0 147371..148372 + 333 86604879 - CYA_0150 - peptide/opine/nickel ABC transporter permease 146 58.72 0 148369..149262 + 297 86604880 - CYA_0151 - peptide/opine/nickel ABC transporter permease 147 61.61 0 149267..150196 + 309 86604881 - CYA_0152 - peptide/opine/nickel uptake ABC transporter ATP-binding protein 148 58.37 0 150183..150857 + 224 86604882 - CYA_0153 - peptide/opine/nickel uptake ABC transporter ATP-binding protein 149 60.68 0 150950..151867 + 305 86604883 - CYA_0154 - putative permease 150 57.08 0 151961..152200 + 79 86604884 - CYA_0155 - DNA-directed RNA polymerase subunit omega 151 52.11 -1 152388..152861 - 157 86604885 - CYA_0156 - ISSoc3, orfA transposase 152 58.57 0 152817..154088 + 423 86604886 - CYA_0158 - ISSoc3, orfB transposase 153 64.58 0 154078..154842 - 254 86604887 - CYA_0157 - small conductance mechanosensitive ion channel (MscS) family protein 154 59.61 0 154882..156000 - 372 86604888 cax CYA_0159 - calcium/proton exchanger 155 60.21 0 156188..156946 - 252 86604889 - CYA_0160 - hypothetical protein 156 66.01 +1 157001..158224 - 407 86604890 coaBC CYA_0161 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 157 53.93 -1 158574..158942 + 122 86604891 - CYA_0162 - hypothetical protein 158 64.39 0 159202..159990 + 262 86604892 - CYA_0163 - hypothetical protein 60.19 MEAN 4.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.