version 1.0
Synechococcus elongatus PCC 6301, complete genome - 1..2696255 2527 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 301 45.93 -2 347049..347183 + 44 56750310 psaJ syc0301_d - photosystem I reaction center subunit IX 302 55.75 0 347576..348253 - 225 56750311 - syc0302_c - hypothetical protein 303 54.17 0 348243..348482 - 79 56750312 - syc0303_c - hypothetical protein 304 56.04 0 348487..350001 - 504 56750313 - syc0304_c - carotene isomerase 305 56.41 0 350459..350770 - 103 56750314 - syc0305_c - hypothetical protein 306 53.91 0 351141..352457 - 438 56750315 - syc0306_c - ABC-2 type transport system ATP-binding protein 307 59.20 0 352687..353382 + 231 56750316 - syc0307_d - cAMP/cGMP binding protein 308 56.34 0 353747..354676 - 309 56750317 ntcB syc0308_c - nitrate assimilation transcriptional activator 309 59.05 0 354667..355716 - 349 56750318 nirB syc0309_c - nitrite reductase related protein 310 55.56 0 356003..357541 + 512 56750319 nirA syc0310_d - ferredoxin-nitrite reductase 311 55.86 0 357606..358937 + 443 56750320 nrtA syc0311_d - ABC-type nitrate/nitrite transport system substrate-binding protein 312 53.45 0 358994..359833 + 279 56750321 nrtB syc0312_d - ABC-type nitrate/nitrite transport system permease protein 313 59.09 0 359848..361827 + 659 56750322 nrtC syc0313_d - ABC-type nitrate/nitrite transport system ATP-binding protein 314 57.70 0 361837..362661 + 274 56750323 nrtD syc0314_d - ABC-type nitrate/nitrite transport system ATP-binding protein 315 57.72 0 362859..365048 + 729 56750324 narB syc0315_d - ferredoxin-nitrate reductase 316 55.81 0 365563..366087 - 174 56750325 - syc0316_c - hypothetical protein 317 41.52 -2 366332..367015 + 227 56750326 - syc0317_d - hypothetical protein 318 58.33 0 367316..367855 + 179 56750327 petC syc0318_d - cytochrome b6-f complex iron-sulfur subunit 319 55.90 0 367901..368875 + 324 56750328 petA syc0319_d - apocytochrome f 320 56.67 0 368959..369828 + 289 56750329 - syc0320_d - prolipoprotein diacylglyceryl transferase 321 58.00 0 369782..370612 + 276 56750330 cobM syc0321_d - precorrin-4 C11-methyltransferase 322 57.59 0 370581..371450 - 289 56750331 - syc0322_c - hypothetical protein 323 58.50 0 371478..372212 + 244 56750332 radC syc0323_d - DNA repair protein RadC 324 57.47 0 372436..373773 - 445 56750333 - syc0324_c - processing protease 325 56.63 0 373878..374624 + 248 56750334 - syc0325_d - phycocyanobilin:ferredoxin oxidoreductase 326 58.49 0 374713..375813 + 366 56750335 - syc0326_d - ABC-transporter membrane fusion protein 327 56.66 0 375797..376975 + 392 56750336 - syc0327_d - ABC transporter permease protein 328 58.98 0 376996..377880 - 294 56750337 truB syc0328_c - tRNA pseudouridine synthase B 329 48.15 -1 377973..378350 + 125 56750338 - syc0329_d - CheY family two-component response regulator 330 56.18 0 378472..378738 - 88 56750339 rpmA syc0330_c - 50S ribosomal protein L27 331 54.43 0 378773..379156 - 127 56750340 rplU syc0331_c - 50S ribosomal protein L21 332 52.63 0 379394..380248 + 284 56750341 kaiA syc0332_d - circadian clock protein KaiA 333 45.95 -2 380338..380646 + 102 56750342 kaiB syc0333_d - circadian clock protein KaiB 334 48.85 -1 380696..382255 + 519 56750343 kaiC syc0334_d - circadian clock protein KaiC 335 58.83 0 382252..383259 - 335 56750344 - syc0335_c - acyl-CoA dehydrogenase family protein 336 55.16 0 383285..383788 - 167 56750345 gpx1 syc0336_c - glutathione peroxidase 337 56.35 0 383919..384335 - 138 56750346 - syc0337_c - virulence associated protein C 338 50.57 -1 384715..384975 + 86 56750347 - syc0338_d - hypothetical protein 339 46.09 -2 384980..385324 + 114 56750348 mobA syc0339_d - molybdopterin-guanine dinucleotide biosynthesis protein A 340 40.56 -2 385324..385572 + 82 56750349 - syc0340_d - hypothetical protein 341 42.53 -2 385575..385835 + 86 56750350 - syc0341_d - hypothetical protein 342 49.41 -1 385957..386211 + 84 56750351 - syc0342_d - hypothetical protein 343 49.62 -1 386204..386467 + 87 56750352 - syc0343_d - hypothetical protein 344 48.55 -1 386594..386869 - 91 56750353 - syc0344_c - hypothetical protein 345 56.97 0 386866..387030 - 54 56750354 - syc0345_c - a part of phage_integrase 346 57.78 0 387031..387345 + 104 56750355 - syc0346_d - hypothetical protein 347 54.35 0 387342..387755 + 137 56750356 - syc0347_d - hypothetical protein 348 59.04 0 387843..390293 + 816 56750357 - syc0348_d - hypothetical protein 349 57.30 0 390297..391727 + 476 56750358 - syc0349_d - glycosyltransferase 350 58.52 0 391837..392757 + 306 56750359 - syc0350_d - hypothetical protein 351 60.75 +1 392726..393502 + 258 56750360 - syc0351_d - tRNA/rRNA methyltransferase 352 59.24 0 393561..395000 + 479 56750361 phdD syc0352_d - dihydrolipoamide dehydrogenase 353 57.66 0 395077..395964 + 295 56750362 trpC syc0353_d - indole-3-glycerol-phosphate synthase 354 59.07 0 396271..396507 - 78 56750363 - syc0354_c - hypothetical protein 355 54.79 0 396584..397282 - 232 56750364 - syc0355_c - hypothetical protein 356 58.90 0 397310..398107 - 265 56750365 pdxJ syc0356_c - pyridoxal phosphate biosynthetic protein PdxJ 357 59.90 0 398362..399129 + 255 56750366 - syc0357_d - putative acyltransferase 358 58.46 0 399207..399815 + 202 56750367 - syc0358_d - hypothetical protein 359 55.98 0 399905..400456 - 183 56750368 gmk syc0359_c - guanylate kinase 360 58.80 0 400625..402085 + 486 56750369 - syc0360_d - leucyl aminopeptidase 361 60.34 +1 402176..402760 + 194 56750370 - syc0361_d - molybdopterin-guanine dinucleotide biosynthesis protein A 362 53.18 0 402764..403156 - 130 56750371 - syc0362_c - AP-4-A phosphorylase II-like protein 363 55.19 0 403274..404449 - 391 56750372 - syc0363_c - hypothetical protein 364 58.80 0 404456..405154 - 232 56750373 ribD syc0364_c - a part of riboflavin biosynthesis protein RibD 365 58.70 0 405158..405433 - 91 56750374 - syc0365_c - hypothetical protein 366 55.26 0 405665..406567 - 300 56750375 - syc0366_c - 6-pyruvoyl-tetrahydropterin synthase-like protein 367 59.81 0 406592..407335 - 247 56750376 - syc0367_c - hypothetical protein 368 56.84 0 407493..408011 - 172 56750377 ndhJ syc0368_c - NADH dehydrogenase subunit J 369 57.91 0 408004..408711 - 235 56750378 ndhK syc0369_c - NADH dehydrogenase subunit B 370 54.23 0 408702..409103 - 133 56750379 ndhC syc0370_c - NADH dehydrogenase subunit A 371 58.51 0 409277..409693 + 138 56750380 rub syc0371_d - rubredoxin 372 58.67 0 409726..410775 + 349 56750381 - syc0372_d - Ycf48-like protein 373 54.76 0 410840..411091 + 83 56750382 psbE syc0373_d - cytochrome b559 subunit alpha 374 55.56 0 411113..411247 + 44 56750383 psbF syc0374_d - cytochrome b559 subunit beta 375 49.21 -1 411260..411385 + 41 56750384 psbL syc0375_d - photosystem II PsbL protein 376 60.00 0 411462..411581 + 39 56750385 psbJ syc0376_d - photosystem II reaction center protein J 377 57.84 0 411671..412939 - 422 56750386 - syc0377_c - hypothetical protein 378 60.73 +1 413209..414657 + 482 56750387 lnt syc0378_d - apolipoprotein N-acyltransferase 379 50.53 -1 414696..416207 + 503 56750388 - syc0379_d - hypothetical protein 380 56.94 0 416486..416968 + 160 56750389 ispF syc0380_d - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 381 52.88 0 416934..418703 + 589 56750390 - syc0381_d - oligopeptide-binding protein of oligopeptide ABC transporter 382 58.37 0 418696..419478 + 260 56750391 cpmA syc0382_d - circadian phase modifier CpmA 383 53.76 0 419475..420032 + 185 56750392 - syc0383_d - hypothetical protein 384 58.07 0 420043..421368 - 441 56750393 - syc0384_c - hypothetical protein 385 50.00 -1 421674..421961 + 95 56750394 - syc0385_d - AP-4-A phosphorylase II-like protein 386 38.39 -2 421964..423388 - 474 56750395 - syc0386_c - hypothetical protein 387 58.50 0 424313..425488 - 391 56750396 - syc0387_c - hypothetical protein 388 56.36 0 425504..425959 - 151 56750397 - syc0388_c - hypothetical protein 389 60.20 +1 425963..426457 - 164 56750398 - syc0389_c - hypothetical protein 390 58.91 0 426506..427408 - 300 56750399 - syc0390_c - hypothetical protein 391 56.69 0 427513..428013 + 166 56750400 - syc0391_d - transcriptional regulator 392 41.57 -2 428321..431500 + 1059 56750401 - syc0392_d - hypothetical protein 393 55.90 0 431539..434724 - 1061 56750402 - syc0393_c - hypothetical protein 394 58.35 0 434711..437308 - 865 56750403 - syc0394_c - hypothetical protein 395 56.38 0 437610..438299 - 229 56750404 - syc0395_c - hypothetical protein 396 58.92 0 438263..439669 + 468 56750405 - syc0396_d - hypothetical protein 397 59.24 0 439666..441510 + 614 56750406 - syc0397_d - hypothetical protein 398 59.26 0 442110..443135 + 341 56750407 - syc0398_d - hypothetical protein 399 59.03 0 443339..444922 + 527 56750408 panC syc0399_d - bifunctional pantoate ligase/cytidylate kinase 400 55.25 0 445071..445727 + 218 56750409 - syc0400_d - hypothetical protein 55.98 MEAN 4.05 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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