version 1.0
Sulfurimonas denitrificans DSM 1251, complete genome - 1..2201561 2096 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 444 31.67 0 444572..445294 + 240 78776645 - Suden_0444 - hypothetical protein 445 32.63 0 445332..446045 + 237 78776646 - Suden_0445 - hypothetical protein 446 33.60 0 446087..447214 + 375 78776647 - Suden_0446 - 3-deoxy-D-manno-octulosonic-acid transferase 447 36.19 0 447226..447960 + 244 78776648 - Suden_0447 - pseudouridine synthase 448 34.17 0 447986..448225 + 79 78776649 - Suden_0448 - excinuclease ABC subunit C 449 33.99 0 448210..448665 + 151 78776650 - Suden_0449 - hypothetical protein 450 35.57 0 448746..450089 + 447 78776651 - Suden_0450 - Signal recognition particle protein 451 40.26 +1 450211..450441 + 76 78776652 rpsP Suden_0451 - 30S ribosomal protein S16 452 37.08 0 450444..450683 + 79 78776653 - Suden_0452 - hypothetical protein 453 32.78 0 450664..451203 + 179 78776654 - Suden_0453 - 16S rRNA processing protein RimM 454 33.91 0 451203..451898 + 231 78776655 trmD Suden_0454 - tRNA (guanine-N(1)-)-methyltransferase 455 36.67 0 452021..452380 + 119 78776656 rplS Suden_0455 - 50S ribosomal protein L19 456 34.06 0 458483..459169 - 228 78776657 aat Suden_0456 - leucyl/phenylalanyl-tRNA--protein transferase 457 34.62 0 459166..461343 - 725 78776658 - Suden_0457 - AAA ATPase 458 31.67 0 461343..461642 - 99 78776659 - Suden_0458 - ATP-dependent Clp protease adaptor protein ClpS 459 35.76 0 461871..463106 - 411 78776660 - Suden_0459 - O-acetylhomoserine aminocarboxypropyltransferase 460 34.54 0 463202..463864 + 220 78776661 - Suden_0460 - dethiobiotin synthase 461 36.64 0 463972..464847 + 291 78776662 pyrB Suden_0461 - aspartate carbamoyltransferase catalytic subunit 462 33.65 0 464837..465775 + 312 78776663 - Suden_0462 - para-aminobenzoate synthase component I 463 30.11 -1 465791..467188 + 465 78776664 - Suden_0463 - histidine kinase 464 36.60 0 467241..468221 + 326 78776665 - Suden_0464 - transaldolase 465 36.13 0 468354..468890 + 178 78776666 - Suden_0465 - 50S ribosomal protein L25/general stress protein Ctc 466 34.77 0 468894..469448 + 184 78776667 - Suden_0466 - peptidyl-tRNA hydrolase 467 31.30 0 469479..470558 + 359 78776668 - Suden_0467 - permease YjgP/YjgQ 468 35.31 0 470650..471861 + 403 78776669 - Suden_0468 - diaminopimelate decarboxylase 469 34.23 0 471863..472639 + 258 78776670 - Suden_0469 - HAD family hydrolase 470 35.53 0 472636..473727 + 363 78776671 - Suden_0470 - chorismate mutase, gamma, beta and epsilon 471 32.60 0 473717..474811 + 364 78776672 - Suden_0471 - histidinol-phosphate aminotransferase 472 35.98 0 474830..476530 + 566 78776673 fliF Suden_0472 - flagellar MS-ring protein 473 36.64 0 476549..477577 + 342 78776674 fliG Suden_0473 - flagellar motor switch protein G 474 34.09 0 477579..478373 + 264 78776675 fliH Suden_0474 - flagellar assembly protein H 475 37.56 0 478383..480203 + 606 78776676 - Suden_0475 - 1-deoxy-D-xylulose-5-phosphate synthase 476 34.02 0 480195..480917 - 240 78776677 - Suden_0476 - hypothetical protein 477 36.85 0 480946..483051 + 701 78776678 - Suden_0477 - hypothetical protein 478 35.68 0 483139..485865 + 908 78776679 - Suden_0478 - hypothetical protein 479 31.86 0 486513..487328 + 271 78776680 - Suden_0480 - hypothetical protein 480 38.99 +1 487420..488604 + 394 78776681 - Suden_0481 - aminotransferase, class I and II 481 27.00 -2 488647..488883 + 78 78776682 - Suden_0482 - hypothetical protein 482 34.97 0 488873..489301 + 142 78776683 - Suden_0483 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 483 33.62 0 489556..490248 + 230 78776684 - Suden_0484 - putative dUTPase 484 35.79 0 490250..490819 + 189 78776685 - Suden_0485 - ABC transporter-related protein 485 35.62 0 490809..491201 - 130 78776686 - Suden_0486 - camphor resistance CrcB protein 486 34.91 0 491167..491865 - 232 78776687 - Suden_0487 - phospholipid/glycerol acyltransferase 487 31.06 -1 491843..492988 - 381 78776688 - Suden_0488 - hypothetical protein 488 35.85 0 492985..493659 - 224 78776689 - Suden_0489 - phosphoribosylformylglycinamidine synthase subunit I 489 34.98 0 493656..493898 - 80 78776690 - Suden_0490 - phosphoribosylformylglycinamidine synthetase PurS 490 32.91 0 493930..494643 - 237 78776691 - Suden_0491 - phosphoribosylaminoimidazole-succinocarboxamide synthase 491 35.38 0 494645..495964 - 439 78776692 - Suden_0492 - peptidase S41A, C-terminal protease 492 36.96 0 496106..496546 + 146 78776693 - Suden_0493 - hemerythrin HHE cation binding region 493 34.03 0 496559..497857 + 432 78776694 - Suden_0494 - hypothetical protein 494 33.72 0 497860..498375 + 171 78776695 - Suden_0495 - shikimate kinase 495 32.85 0 498368..498784 + 138 78776696 - Suden_0496 - hypothetical protein 496 37.97 +1 498788..500080 + 430 78776697 - Suden_0497 - histidinol dehydrogenase 497 37.87 +1 500272..500910 + 212 78776698 - Suden_0498 - 4Fe-4S ferredoxin, iron-sulfur binding 498 36.67 0 500910..501809 + 299 78776699 - Suden_0499 - polysulphide reductase, NrfD 499 39.07 +1 501822..505205 + 1127 78776700 - Suden_0500 - twin-arginine translocation pathway signal 500 29.70 -1 505253..505747 - 164 78776701 - Suden_0501 - putative thioredoxin 501 33.12 0 505848..506324 + 158 78776702 - Suden_0502 - hypothetical protein 502 35.09 0 506345..507994 - 549 78776703 - Suden_0503 - phosphate transporter 503 34.80 0 508067..508612 - 181 78776704 - Suden_0504 - peptidylprolyl isomerase 504 35.79 0 508751..509035 - 94 78776705 - Suden_0505 - histone-like DNA-binding protein 505 35.83 0 509370..509609 - 79 78776706 - Suden_0506 - hypothetical protein 506 28.75 -1 509836..511515 - 559 78776707 - Suden_0507 - hypothetical protein 507 28.24 -1 511487..512173 - 228 78776708 - Suden_0508 - hypothetical protein 508 36.96 0 512289..513362 + 357 78776709 - Suden_0509 - fructose-bisphosphate aldolase 509 26.07 -2 513368..513670 - 100 78776710 - Suden_0510 - hypothetical protein 510 33.05 0 513755..514462 + 235 78776711 - Suden_0511 - methyltransferase 511 27.92 -1 514540..515223 + 227 78776712 - Suden_0512 - cyclic nucleotide-binding domain-containing protein 512 33.56 0 515309..515752 + 147 78776713 - Suden_0513 - heat shock protein Hsp20 513 30.28 -1 515763..516188 + 141 78776714 - Suden_0514 - heat shock protein Hsp20 514 32.52 0 516234..516479 - 81 78776715 - Suden_0515 - hypothetical protein 515 33.33 0 516514..517200 - 228 78776716 - Suden_0516 - endonuclease III/Nth 516 32.61 0 517240..518073 + 277 78776717 - Suden_0517 - PpiC-type peptidyl-prolyl cis-trans isomerase 517 37.32 0 518077..518928 + 283 78776718 - Suden_0518 - hypothetical protein 518 37.46 0 518921..519598 - 225 78776719 - Suden_0519 - nitroreductase 519 36.24 0 519743..522319 + 858 78776720 - Suden_0520 - AAA ATPase 520 39.26 +1 522437..522571 + 44 78776721 - Suden_0521 - ribosomal protein L34 521 31.67 0 522688..522927 + 79 78776722 - Suden_0522 - ribonuclease P protein 522 30.43 -1 522905..523249 + 114 78776723 - Suden_0523 - hypothetical protein 523 34.45 0 523234..524844 + 536 78776724 - Suden_0524 - putative inner membrane protein translocase component YidC 524 32.14 0 524837..525841 + 334 78776725 - Suden_0525 - hypothetical protein 525 37.66 0 525845..527185 + 446 78776726 trmE Suden_0526 - tRNA modification GTPase TrmE 526 39.19 +1 527185..527577 + 130 78776727 - Suden_0527 - Holliday junction resolvase-like protein 527 32.58 0 527560..529683 - 707 78776728 - Suden_0528 - diguanylate cyclase/phosphodiesterase 528 35.63 0 529772..530425 - 217 78776729 - Suden_0529 - hypothetical protein 529 33.91 0 530863..531552 - 229 78776730 - Suden_0531 - two component transcriptional regulator 530 31.37 0 531549..532262 - 237 78776731 - Suden_0532 - histidine kinase 531 34.54 0 532534..533031 - 165 78776732 - Suden_0533 - MarR family transcriptional regulator 532 34.14 0 533126..534358 + 410 78776733 - Suden_0534 - Outer membrane efflux protein 533 35.60 0 534359..535459 + 366 78776734 - Suden_0535 - secretion protein HlyD 534 36.49 0 535461..538565 + 1034 78776735 - Suden_0536 - resistance-nodulation-cell division family transporter 535 33.53 0 538770..540779 + 669 78776736 - Suden_0537 - N-6 DNA methylase 536 29.65 -1 540797..541909 + 370 78776737 - Suden_0538 - hypothetical protein 537 31.94 0 541922..543001 + 359 78776738 - Suden_0539 - hypothetical protein 538 33.33 0 543096..543716 - 206 78776739 - Suden_0540 - hypothetical protein 539 39.00 +1 543824..544846 + 340 78776740 - Suden_0541 - ketol-acid reductoisomerase 540 33.64 0 544990..545952 - 320 78776741 - Suden_0542 - DNA polymerase III subunit delta 541 36.21 0 545955..547904 - 649 78776742 - Suden_0543 - exoribonuclease II 542 35.59 0 547909..548706 - 265 78776743 - Suden_0544 - putative signal transduction protein 543 30.28 -1 548833..549159 + 108 78776744 - Suden_0545 - hypothetical protein 34.46 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0