version 1.0
Sulfurimonas denitrificans DSM 1251, complete genome - 1..2201561 2096 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 333 40.27 +1 333557..333931 + 124 78776534 - Suden_0333 - ferredoxin, 2Fe-2S 334 31.97 0 333933..334298 + 121 78776535 - Suden_0334 - aspartate alpha-decarboxylase 335 37.86 +1 334303..334611 + 102 78776536 - Suden_0335 - hypothetical protein 336 30.99 -1 334613..335593 + 326 78776537 - Suden_0336 - PDZ/DHR/GLGF 337 37.10 0 335606..336454 + 282 78776538 - Suden_0337 - polyprenyl synthetase 338 38.70 +1 336472..338391 + 639 78776539 - Suden_0338 - transketolase 339 32.14 0 338582..338833 + 83 78776540 - Suden_0339 - hypothetical protein 340 33.93 0 338886..339560 - 224 78776541 - Suden_0340 - DNA-3-methyladenine glycosylase III 341 32.34 0 339557..340465 - 302 78776542 - Suden_0341 - auxin efflux carrier 342 33.02 0 340518..340838 + 106 78776543 - Suden_0342 - thioredoxin-like 343 31.47 0 340842..341591 - 249 78776544 - Suden_0343 - tRNA/rRNA methyltransferase (SpoU) 344 28.79 -1 341641..342366 - 241 78776545 - Suden_0344 - hypothetical protein 345 40.67 +1 343130..344329 + 399 78776546 - Suden_0345 - elongation factor Tu 346 28.76 -1 344373..344525 + 50 78776547 - Suden_0346 - ribosomal protein L33 347 28.33 -1 344721..344900 + 59 78776548 secE Suden_0347 - preprotein translocase subunit SecE 348 32.78 0 344910..345449 + 179 78776549 nusG Suden_0348 - transcription antitermination protein NusG 349 34.74 0 345614..346039 + 141 78776550 - Suden_0349 - ribosomal protein L11 350 35.35 0 346110..346802 + 230 78776551 rplA Suden_0350 - 50S ribosomal protein L1 351 35.21 0 346955..347434 + 159 78776552 rplJ Suden_0351 - 50S ribosomal protein L10 352 36.04 0 347494..347862 + 122 78776553 rplL Suden_0352 - 50S ribosomal protein L7/L12 353 35.79 0 348090..352235 + 1381 78776554 rpoB Suden_0353 - DNA-directed RNA polymerase subunit beta 354 36.17 0 352228..356739 + 1503 78776555 - Suden_0354 - DNA-directed RNA polymerase, subunit beta-prime 355 37.53 0 356938..357318 + 126 78776556 rpsL Suden_0355 - 30S ribosomal protein S12 356 36.32 0 357420..357887 + 155 78776557 - Suden_0356 - 30S ribosomal protein S7 357 39.17 +1 357900..359990 + 696 78776558 - Suden_0357 - elongation factor G 358 33.19 0 360339..361052 - 237 78776559 - Suden_0358 - arginyl-tRNA-protein transferase 359 33.62 0 361094..361438 + 114 78776560 - Suden_0359 - hypothetical protein 360 36.16 0 361416..362513 - 365 78776561 prfB Suden_0360 - peptide chain release factor 2 361 36.37 0 362567..363388 + 273 78776562 panC Suden_0361 - pantoate--beta-alanine ligase 362 34.62 0 363335..365122 - 595 78776563 - Suden_0362 - peptidoglycan glycosyltransferase 363 38.67 +1 365154..365453 - 99 78776564 fliE Suden_0363 - flagellar hook-basal body protein FliE 364 37.17 0 365469..365963 - 164 78776565 flgC Suden_0364 - flagellar basal body rod protein FlgC 365 35.42 0 365974..366405 - 143 78776566 flgB Suden_0365 - flagellar basal body rod protein FlgB 366 34.84 0 366558..366956 + 132 78776567 - Suden_0366 - N-terminal methylation 367 34.25 0 367064..367501 + 145 78776568 - Suden_0367 - N-terminal methylation 368 36.86 0 367533..369377 + 614 78776569 - Suden_0368 - primosome assembly protein PriA 369 35.79 0 369361..369930 - 189 78776570 - Suden_0369 - nucleoside diphosphate pyrophosphatase 370 33.66 0 369899..371107 - 402 78776571 - Suden_0370 - peptidase M23B 371 34.20 0 371221..372027 + 268 78776572 - Suden_0371 - hypothetical protein 372 37.30 0 372031..373416 + 461 78776573 - Suden_0372 - FAD linked oxidase-like 373 28.18 -1 373423..374256 + 277 78776574 - Suden_0373 - ribonuclease BN 374 33.89 0 374203..375465 - 420 78776575 - Suden_0374 - ComEC/Rec2-related protein 375 36.85 0 375468..376919 - 483 78776576 - Suden_0375 - replicative DNA helicase 376 39.28 +1 376919..377977 - 352 78776577 ispG Suden_0376 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 377 34.84 0 378139..380124 - 661 78776578 - Suden_0377 - TonB-dependent receptor 378 34.04 0 380345..381340 - 331 78776579 - Suden_0378 - peptidyl-arginine deiminase 379 36.97 0 381357..382373 + 338 78776580 alr Suden_0379 - alanine racemase 380 30.70 -1 382370..384340 - 656 78776581 - Suden_0380 - diguanylate cyclase/phosphodiesterase 381 33.84 0 384420..384812 - 130 78776582 - Suden_0381 - hypothetical protein 382 29.78 -1 384809..385033 - 74 78776583 - Suden_0382 - hypothetical protein 383 33.68 0 385030..385611 - 193 78776584 gidB Suden_0383 - glucose-inhibited division protein B 384 37.94 +1 385645..386208 - 187 78776585 ribA Suden_0384 - GTP cyclohydrolase II 385 38.68 +1 386282..387253 + 323 78776586 - Suden_0385 - delta-aminolevulinic acid dehydratase 386 39.08 +1 387342..388280 + 312 78776587 - Suden_0386 - ornithine carbamoyltransferase 387 34.12 0 388310..388564 - 84 78776588 - Suden_0387 - hypothetical protein 388 38.10 +1 389163..389792 - 209 78776589 - Suden_0388 - hypothetical protein 389 35.00 0 389848..390807 - 319 78776590 - Suden_0389 - tryptophanyl-tRNA synthetase 390 33.33 0 390950..391279 + 109 78776591 - Suden_0390 - putative sigma 54 modulation protein/ribosomal protein S30EA 391 34.52 0 391281..391703 + 140 78776592 - Suden_0391 - hypothetical protein 392 36.03 0 391778..393262 - 494 78776593 engA Suden_0392 - GTP-binding protein EngA 393 33.33 0 393323..394012 - 229 78776594 - Suden_0393 - hypothetical protein 394 37.82 +1 394009..394587 - 192 78776595 - Suden_0394 - hypothetical protein 395 31.81 0 394727..395185 + 152 78776596 - Suden_0395 - phosphoribosyltransferase 396 36.57 0 395175..395483 - 102 78776597 - Suden_0396 - C-type cytochrome, putative 397 33.47 0 395541..396293 - 250 78776598 - Suden_0397 - heat shock protein DnaJ-like 398 30.68 -1 396369..397160 - 263 78776599 - Suden_0398 - hypothetical protein 399 32.52 0 397177..398163 - 328 78776600 - Suden_0399 - hypothetical protein 400 35.47 0 398227..399114 + 295 78776601 - Suden_0400 - hypothetical protein 401 36.99 0 399171..399962 + 263 78776602 - Suden_0401 - 2-dehydro-3-deoxyphosphooctonate aldolase 402 40.22 +1 399966..400430 + 154 78776603 ribH Suden_0402 - riboflavin synthase subunit beta 403 37.59 0 400433..400831 + 132 78776604 nusB Suden_0403 - transcription antitermination protein NusB 404 37.52 0 400834..401883 + 349 78776605 - Suden_0404 - hypothetical protein 405 34.97 0 401884..403167 + 427 78776606 - Suden_0405 - peptidase M16-like 406 36.09 0 403259..405073 + 604 78776607 - Suden_0406 - DEAD/DEAH box helicase-like 407 32.78 0 405128..405670 - 180 78776608 - Suden_0407 - sigma 54 modulation protein/ribosomal protein S30EA 408 35.48 0 405736..406155 - 139 78776609 - Suden_0408 - hypothetical protein 409 38.21 +1 406182..407084 - 300 78776610 - Suden_0409 - hypothetical protein 410 36.84 0 407084..407710 - 208 78776611 - Suden_0410 - hypothetical protein 411 35.92 0 407704..409677 - 657 78776612 - Suden_0411 - hypothetical protein 412 32.28 0 409777..410157 - 126 78776613 - Suden_0412 - flagellar assembly protein FliW 413 34.84 0 410278..411138 + 286 78776614 - Suden_0413 - DNA uptake lipoprotein-like 414 36.15 0 411128..413539 + 803 78776615 - Suden_0414 - peptidase S16, ATP-dependent protease La 415 32.00 0 413536..413910 - 124 78776616 - Suden_0415 - response regulator receiver domain-containing protein 416 33.37 0 414019..416709 - 896 78776617 - Suden_0416 - histidine kinase 417 29.69 -1 416781..417164 - 127 78776618 - Suden_0417 - putative PAS/PAC sensor protein 418 34.55 0 417232..419034 - 600 78776619 uvrC Suden_0418 - excinuclease ABC subunit C 419 29.41 -1 419024..419482 - 152 78776620 - Suden_0419 - hypothetical protein 420 37.40 0 419638..421089 + 483 78776621 - Suden_0420 - L-aspartate oxidase 421 36.75 0 421082..422455 + 457 78776622 - Suden_0421 - transporter, putative 422 37.91 +1 422554..424104 + 516 78776623 guaA Suden_0422 - bifunctional GMP synthase/glutamine amidotransferase protein 423 33.80 0 424115..424753 + 212 78776624 hemD Suden_0423 - uroporphyrinogen-III synthase 424 37.47 0 425069..426349 + 426 78776625 - Suden_0424 - phosphoribosylamine--glycine ligase 425 32.00 0 426346..426795 + 149 78776626 - Suden_0425 - RDD protein 426 31.66 0 426788..429004 + 738 78776627 - Suden_0426 - organic solvent tolerance protein, putative 427 34.09 0 429008..429670 + 220 78776628 - Suden_0427 - hypothetical protein 428 36.43 0 429660..431825 + 721 78776629 - Suden_0428 - polynucleotide phosphorylase/polyadenylase 429 40.63 +1 431999..432313 + 104 78776630 - Suden_0429 - F0F1 ATP synthase subunit C 430 32.06 0 432652..433752 + 366 78776631 - Suden_0430 - hypothetical protein 431 37.98 +1 433865..435349 - 494 78776632 - Suden_0431 - sulphate transporter 432 38.98 +1 435360..435713 - 117 78776633 - Suden_0432 - cupin region 34.46 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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