version 1.0
Sulfurimonas denitrificans DSM 1251, complete genome - 1..2201561 2096 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 273 37.83 +1 289407..290675 - 422 78776474 - Suden_0273 - 2-hydroxyglutaryl-CoA dehydratase, D-component 274 39.35 +1 290668..291648 - 326 78776475 - Suden_0274 - 4Fe-4S ferredoxin, iron-sulfur binding 275 35.73 0 291635..294391 - 918 78776476 - Suden_0275 - polyferredoxin-like 276 35.51 0 294404..295000 - 198 78776477 - Suden_0276 - hypothetical protein 277 30.21 -1 295078..295461 - 127 78776478 - Suden_0277 - biopolymer transport protein ExbD/TolR 278 32.67 0 295442..295894 - 150 78776479 - Suden_0278 - MotA/TolQ/ExbB proton channel 279 34.47 0 295915..298107 - 730 78776480 - Suden_0279 - TonB-dependent receptor 280 32.45 0 298260..298826 - 188 78776481 - Suden_0280 - ribonuclease HII 281 31.69 0 298816..300396 - 526 78776482 - Suden_0281 - multi-sensor signal transduction histidine kinase 282 30.87 -1 300396..300761 - 121 78776483 - Suden_0282 - response regulator receiver domain-containing protein 283 36.04 0 300758..302086 - 442 78776484 - Suden_0283 - methyl-accepting chemotaxis sensory transducer 284 29.86 -1 302170..303234 - 354 78776485 - Suden_0284 - uncharacterized ATPase 285 38.14 +1 303390..303701 + 103 78776486 rpsJ Suden_0285 - 30S ribosomal protein S10 286 38.02 +1 303711..304286 + 191 78776487 rplC Suden_0286 - 50S ribosomal protein L3 287 37.72 0 304286..304900 + 204 78776488 rplD Suden_0287 - 50S ribosomal protein L4 288 35.11 0 304901..305182 + 93 78776489 rplW Suden_0288 - 50S ribosomal protein L23 289 39.40 +1 305184..306023 + 279 78776490 rplB Suden_0289 - 50S ribosomal protein L2 290 36.59 0 306028..306303 + 91 78776491 rpsS Suden_0290 - 30S ribosomal protein S19 291 37.42 0 306306..306623 + 105 78776492 rplV Suden_0291 - 50S ribosomal protein L22 292 37.88 +1 306625..307350 + 241 78776493 rpsC Suden_0292 - 30S ribosomal protein S3 293 38.50 +1 307353..307778 + 141 78776494 rplP Suden_0293 - 50S ribosomal protein L16 294 32.80 0 307765..307950 + 61 78776495 - Suden_0294 - 50S ribosomal protein L29 295 35.74 0 307960..308208 + 82 78776496 rpsQ Suden_0295 - 30S ribosomal protein S17 296 37.67 0 308208..308576 + 122 78776497 rplN Suden_0296 - 50S ribosomal protein L14 297 34.20 0 308576..308806 + 76 78776498 rplX Suden_0297 - 50S ribosomal protein L24 298 37.36 0 308809..309354 + 181 78776499 rplE Suden_0298 - 50S ribosomal protein L5 299 38.71 +1 309354..309539 + 61 78776500 rpsN Suden_0299 - 30S ribosomal protein S14 300 34.09 0 309645..310040 + 131 78776501 rpsH Suden_0300 - 30S ribosomal protein S8 301 37.24 0 310050..310586 + 178 78776502 rplF Suden_0301 - 50S ribosomal protein L6 302 36.97 0 310600..310956 + 118 78776503 rplR Suden_0302 - 50S ribosomal protein L18 303 36.51 0 310965..311405 + 146 78776504 rpsE Suden_0303 - 30S ribosomal protein S5 304 38.35 +1 311409..311807 + 132 78776505 rplO Suden_0304 - 50S ribosomal protein L15 305 34.92 0 311810..313072 + 420 78776506 secY Suden_0305 - preprotein translocase subunit SecY 306 37.68 0 313076..313834 + 252 78776507 - Suden_0306 - methionine aminopeptidase 307 33.79 0 313851..314069 + 72 78776508 infA Suden_0307 - translation initiation factor IF-1 308 29.00 -1 314103..314840 - 245 78776509 - Suden_0308 - rhodanese-like protein 309 30.03 -1 314848..315150 - 100 78776510 - Suden_0309 - chorismate mutase 310 29.26 -1 315204..315890 - 228 78776511 - Suden_0310 - phospholipid/glycerol acyltransferase 311 29.95 -1 315900..316106 - 68 78776512 - Suden_0311 - hypothetical protein 312 34.75 0 316108..316956 - 282 78776513 - Suden_0312 - hypothetical protein 313 33.89 0 317024..318277 - 417 78776514 - Suden_0313 - arsenical pump membrane protein 314 33.08 0 318277..318675 - 132 78776515 - Suden_0314 - arsenate reductase 315 29.49 -1 318668..318979 - 103 78776516 - Suden_0315 - ArsR family transcriptional regulator 316 30.78 -1 319119..320528 - 469 78776517 - Suden_0316 - histidine kinase 317 35.11 0 320521..321195 - 224 78776518 - Suden_0317 - two component transcriptional regulator 318 32.78 0 321199..321558 - 119 78776519 - Suden_0318 - diacylglycerol kinase 319 34.31 0 321555..323495 - 646 78776520 - Suden_0319 - sulfatase 320 32.66 0 323665..325587 + 640 78776521 - Suden_0320 - sulfatase 321 31.28 0 325577..326257 + 226 78776522 - Suden_0321 - PAP2 superfamily protein 322 33.91 0 326313..326657 + 114 78776523 - Suden_0322 - hypothetical protein 323 31.58 0 326933..327046 + 37 78776524 rpmJ Suden_0323 - 50S ribosomal protein L36 324 39.94 +1 327049..327411 + 120 78776525 rpsM Suden_0324 - 30S ribosomal protein S13 325 39.44 +1 327422..327814 + 130 78776526 - Suden_0325 - 30S ribosomal protein S11 326 38.60 +1 327826..328452 + 208 78776527 rpsD Suden_0326 - 30S ribosomal protein S4 327 33.23 0 328481..329473 + 330 78776528 - Suden_0327 - DNA-directed RNA polymerase subunit alpha 328 37.04 0 329494..329844 + 116 78776529 rplQ Suden_0328 - 50S ribosomal protein L17 329 33.01 0 329976..331208 + 410 78776530 - Suden_0329 - oxidoreductase like protein 330 32.97 0 331292..331567 + 91 78776531 - Suden_0330 - nitrogen-fixing NifU-like protein 331 33.67 0 331584..332174 + 196 78776532 - Suden_0331 - hypothetical protein 332 33.03 0 332164..333465 + 433 78776533 murE Suden_0332 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 333 40.27 +1 333557..333931 + 124 78776534 - Suden_0333 - ferredoxin, 2Fe-2S 334 31.97 0 333933..334298 + 121 78776535 - Suden_0334 - aspartate alpha-decarboxylase 335 37.86 +1 334303..334611 + 102 78776536 - Suden_0335 - hypothetical protein 336 30.99 -1 334613..335593 + 326 78776537 - Suden_0336 - PDZ/DHR/GLGF 337 37.10 0 335606..336454 + 282 78776538 - Suden_0337 - polyprenyl synthetase 338 38.70 +1 336472..338391 + 639 78776539 - Suden_0338 - transketolase 339 32.14 0 338582..338833 + 83 78776540 - Suden_0339 - hypothetical protein 340 33.93 0 338886..339560 - 224 78776541 - Suden_0340 - DNA-3-methyladenine glycosylase III 341 32.34 0 339557..340465 - 302 78776542 - Suden_0341 - auxin efflux carrier 342 33.02 0 340518..340838 + 106 78776543 - Suden_0342 - thioredoxin-like 343 31.47 0 340842..341591 - 249 78776544 - Suden_0343 - tRNA/rRNA methyltransferase (SpoU) 344 28.79 -1 341641..342366 - 241 78776545 - Suden_0344 - hypothetical protein 345 40.67 +1 343130..344329 + 399 78776546 - Suden_0345 - elongation factor Tu 346 28.76 -1 344373..344525 + 50 78776547 - Suden_0346 - ribosomal protein L33 347 28.33 -1 344721..344900 + 59 78776548 secE Suden_0347 - preprotein translocase subunit SecE 348 32.78 0 344910..345449 + 179 78776549 nusG Suden_0348 - transcription antitermination protein NusG 349 34.74 0 345614..346039 + 141 78776550 - Suden_0349 - ribosomal protein L11 350 35.35 0 346110..346802 + 230 78776551 rplA Suden_0350 - 50S ribosomal protein L1 351 35.21 0 346955..347434 + 159 78776552 rplJ Suden_0351 - 50S ribosomal protein L10 352 36.04 0 347494..347862 + 122 78776553 rplL Suden_0352 - 50S ribosomal protein L7/L12 353 35.79 0 348090..352235 + 1381 78776554 rpoB Suden_0353 - DNA-directed RNA polymerase subunit beta 354 36.17 0 352228..356739 + 1503 78776555 - Suden_0354 - DNA-directed RNA polymerase, subunit beta-prime 355 37.53 0 356938..357318 + 126 78776556 rpsL Suden_0355 - 30S ribosomal protein S12 356 36.32 0 357420..357887 + 155 78776557 - Suden_0356 - 30S ribosomal protein S7 357 39.17 +1 357900..359990 + 696 78776558 - Suden_0357 - elongation factor G 358 33.19 0 360339..361052 - 237 78776559 - Suden_0358 - arginyl-tRNA-protein transferase 359 33.62 0 361094..361438 + 114 78776560 - Suden_0359 - hypothetical protein 360 36.16 0 361416..362513 - 365 78776561 prfB Suden_0360 - peptide chain release factor 2 361 36.37 0 362567..363388 + 273 78776562 panC Suden_0361 - pantoate--beta-alanine ligase 362 34.62 0 363335..365122 - 595 78776563 - Suden_0362 - peptidoglycan glycosyltransferase 363 38.67 +1 365154..365453 - 99 78776564 fliE Suden_0363 - flagellar hook-basal body protein FliE 364 37.17 0 365469..365963 - 164 78776565 flgC Suden_0364 - flagellar basal body rod protein FlgC 365 35.42 0 365974..366405 - 143 78776566 flgB Suden_0365 - flagellar basal body rod protein FlgB 366 34.84 0 366558..366956 + 132 78776567 - Suden_0366 - N-terminal methylation 367 34.25 0 367064..367501 + 145 78776568 - Suden_0367 - N-terminal methylation 368 36.86 0 367533..369377 + 614 78776569 - Suden_0368 - primosome assembly protein PriA 369 35.79 0 369361..369930 - 189 78776570 - Suden_0369 - nucleoside diphosphate pyrophosphatase 370 33.66 0 369899..371107 - 402 78776571 - Suden_0370 - peptidase M23B 371 34.20 0 371221..372027 + 268 78776572 - Suden_0371 - hypothetical protein 372 37.30 0 372031..373416 + 461 78776573 - Suden_0372 - FAD linked oxidase-like 34.46 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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