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Sulfurimonas denitrificans DSM 1251, complete genome - 1..2201561 2096 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1922 37.42 0 2014129..2014740 + 203 78778124 - Suden_1930 - riboflavin synthase subunit alpha 1923 38.29 +1 2014740..2016515 + 591 78778125 - Suden_1931 - ATP-dependent DNA helicase RecQ 1924 36.75 0 2016631..2018679 + 682 78778126 - Suden_1932 - methyl-accepting chemotaxis sensory transducer 1925 34.51 0 2018685..2019449 - 254 78778127 - Suden_1933 - hypothetical protein 1926 27.21 -2 2019511..2019804 - 97 78778128 - Suden_1934 - hypothetical protein 1927 33.33 0 2019804..2020022 - 72 78778129 - Suden_1935 - hypothetical protein 1928 36.20 0 2020163..2020651 - 162 78778130 - Suden_1936 - hypothetical protein 1929 35.31 0 2020653..2020955 - 100 78778131 - Suden_1937 - hypothetical protein 1930 40.08 +1 2020959..2021462 - 167 78778132 - Suden_1938 - S-ribosylhomocysteinase 1931 37.97 +1 2021598..2022179 + 193 78778133 - Suden_1939 - CheB methylesterase 1932 32.44 0 2022179..2022958 + 259 78778134 - Suden_1940 - MCP methyltransferase, CheR-type 1933 32.10 0 2023036..2025621 + 861 78778135 - Suden_1941 - diguanylate cyclase/phosphodiesterase 1934 26.96 -2 2025627..2025830 - 67 78778136 - Suden_1942 - hypothetical protein 1935 33.85 0 2025827..2027581 - 584 78778137 - Suden_1943 - Na+/Pi-cotransporter 1936 32.72 0 2027596..2028744 - 382 78778138 - Suden_1944 - Sodium/hydrogen exchanger 1937 40.05 +1 2028819..2030054 - 411 78778139 - Suden_1945 - DEAD/DEAH box helicase-like 1938 35.92 0 2030122..2030970 - 282 78778140 - Suden_1946 - AraC family transcriptional regulator 1939 40.30 +1 2030982..2032244 - 420 78778141 - Suden_1947 - serine hydroxymethyltransferase 1940 33.54 0 2032335..2032808 - 157 78778142 - Suden_1948 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1941 28.19 -1 2032937..2033461 + 174 78778143 - Suden_1949 - hypothetical protein 1942 40.97 +1 2033479..2034369 - 296 78778144 - Suden_1950 - hypothetical protein 1943 29.66 -1 2034646..2035053 + 135 78778145 - Suden_1951 - response regulator receiver domain-containing protein 1944 42.95 +2 2035506..2040122 + 1538 78778146 - Suden_1952 - hypothetical protein 1945 30.04 -1 2040361..2040603 + 80 78778147 - Suden_1953 - hypothetical protein 1946 25.44 -2 2040967..2041194 + 75 78778148 - Suden_1954 - hypothetical protein 1947 26.05 -2 2041199..2041459 + 86 78778149 - Suden_1955 - hypothetical protein 1948 26.76 -2 2041787..2041999 - 70 78778150 - Suden_1956 - plasmid stabilization system protein 1949 36.90 0 2042004..2042171 - 55 78778151 - Suden_1957 - hypothetical protein 1950 25.93 -2 2042214..2042456 + 80 78778152 - Suden_1958 - hypothetical protein 1951 30.95 -1 2042946..2043155 - 69 78778153 - Suden_1959 - hypothetical protein 1952 37.95 +1 2043371..2043565 + 64 78778154 - Suden_1960 - hypothetical protein 1953 31.86 0 2043600..2044073 - 157 78778155 - Suden_1961 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1954 33.80 0 2044312..2045601 + 429 78778156 - Suden_1962 - diguanylate cyclase 1955 33.49 0 2045687..2046310 - 207 78778157 - Suden_1963 - DSBA oxidoreductase 1956 35.22 0 2046524..2047000 + 158 78778158 - Suden_1964 - hypothetical protein 1957 38.10 +1 2047069..2047278 + 69 78778159 - Suden_1965 - CopG-like DNA-binding 1958 28.68 -1 2047268..2047525 + 85 78778160 - Suden_1966 - addiction module toxin, RelE/StbE 1959 38.41 +1 2047708..2050506 - 932 78778161 - Suden_1967 - helicase-like 1960 36.50 0 2050536..2051705 - 389 78778162 - Suden_1968 - UDP-glucose 6-dehydrogenase 1961 29.50 -1 2051833..2052276 + 147 78778163 - Suden_1969 - hypothetical protein 1962 38.74 +1 2052283..2054244 - 653 78778164 - Suden_1970 - short chain dehydrogenase 1963 40.46 +1 2054249..2055328 - 359 78778165 mtnA Suden_1971 - methylthioribose-1-phosphate isomerase 1964 34.15 0 2055318..2056538 - 406 78778166 mtnK Suden_1972 - methylthioribose kinase 1965 36.21 0 2056835..2057530 - 231 78778167 - Suden_1973 - hypothetical protein 1966 33.33 0 2057517..2057819 - 100 78778168 - Suden_1974 - hypothetical protein 1967 33.09 0 2057974..2058381 - 135 78778169 - Suden_1975 - hypothetical protein 1968 34.83 0 2058400..2059398 - 332 78778170 - Suden_1976 - AsnC family transcriptional regulator 1969 33.69 0 2059540..2060106 + 188 78778171 - Suden_1977 - siroheme synthase CysG 1970 32.81 0 2060107..2060487 + 126 78778172 - Suden_1978 - hypothetical protein 1971 36.77 0 2060484..2061704 - 406 78778173 - Suden_1979 - major facilitator transporter 1972 35.56 0 2061697..2062593 - 298 78778174 - Suden_1980 - glycosyl transferase family protein 1973 34.07 0 2062765..2063169 - 134 78778175 - Suden_1981 - hypothetical protein 1974 32.72 0 2063691..2064017 + 108 78778176 - Suden_1982 - hypothetical protein 1975 39.01 +1 2064057..2064743 + 228 78778177 - Suden_1983 - nitric-oxide reductase subunit NorC 1976 39.23 +1 2064733..2066157 + 474 78778178 - Suden_1984 - nitric-oxide reductase subunit NorB 1977 38.21 +1 2066434..2068074 + 546 78778179 - Suden_1985 - nitrite reductase NirS 1978 32.35 0 2068264..2068569 + 101 78778180 - Suden_1986 - cytochrome c, class I 1979 35.92 0 2068570..2069691 + 373 78778181 - Suden_1987 - radical SAM family protein 1980 32.37 0 2069691..2070827 + 378 78778182 - Suden_1988 - nitrite reductase NirF 1981 38.60 +1 2070827..2071567 + 246 78778183 - Suden_1989 - uroporphyrinogen-III C-methyltransferase 1982 31.50 0 2071560..2073086 + 508 78778184 - Suden_1990 - histidine kinase 1983 33.77 0 2073076..2073765 + 229 78778185 - Suden_1991 - two component transcriptional regulator 1984 35.04 0 2073762..2074463 - 233 78778186 - Suden_1992 - Sel1 repeat-containing protein 1985 36.04 0 2074536..2075753 - 405 78778187 - Suden_1993 - Sodium:dicarboxylate symporter 1986 35.06 0 2075767..2077095 - 442 78778188 - Suden_1994 - divalent cation transporter 1987 32.51 0 2077234..2077719 - 161 78778189 - Suden_1995 - hypothetical protein 1988 35.19 0 2077802..2078395 + 197 78778190 - Suden_1996 - putative lipoprotein 1989 35.12 0 2078454..2078900 + 148 78778191 - Suden_1997 - hypothetical protein 1990 35.16 0 2078986..2080788 + 600 78778192 - Suden_1998 - hypothetical protein 1991 30.32 -1 2080795..2081490 - 231 78778193 - Suden_1999 - hypothetical protein 1992 32.26 0 2081534..2081812 - 92 78778194 - Suden_2000 - hypothetical protein 1993 39.42 +1 2081821..2083086 - 421 78778195 eno Suden_2001 - phosphopyruvate hydratase 1994 39.21 +1 2083144..2084181 - 345 78778196 recA Suden_2002 - recombinase A 1995 32.17 0 2084383..2086695 + 770 78778197 - Suden_2003 - diguanylate cyclase/phosphodiesterase 1996 37.62 0 2086761..2087624 + 287 78778198 - Suden_2004 - hypothetical protein 1997 34.46 0 2087624..2087890 + 88 78778199 fliQ Suden_2005 - flagellar biosynthesis protein FliQ 1998 33.83 0 2087890..2088702 + 270 78778200 murB Suden_2006 - UDP-N-acetylenolpyruvoylglucosamine reductase 1999 37.13 0 2088725..2089699 - 324 78778201 - Suden_2007 - nitrogen-fixing NifU-like-like 2000 38.93 +1 2089846..2091060 - 404 78778202 - Suden_2008 - aminotransferase, class V 2001 29.96 -1 2091222..2091725 + 167 78778203 - Suden_2009 - hypothetical protein 2002 37.85 +1 2091722..2092408 - 228 78778204 - Suden_2010 - pseudouridine synthase, Rsu 2003 38.03 +1 2092511..2095576 - 1021 78778205 - Suden_2011 - heavy metal efflux pump CzcA 2004 35.32 0 2095569..2096627 - 352 78778206 - Suden_2012 - secretion protein HlyD 2005 33.50 0 2096624..2097805 - 393 78778207 - Suden_2013 - hypothetical protein 2006 36.00 0 2097845..2098144 - 99 78778208 - Suden_2014 - hypothetical protein 2007 29.20 -1 2098226..2098975 - 249 78778209 - Suden_2015 - diguanylate cyclase 2008 30.37 -1 2098994..2099836 - 280 78778210 - Suden_2016 - hypothetical protein 2009 39.52 +1 2099986..2101245 + 419 78778211 - Suden_2017 - 3-isopropylmalate dehydratase large subunit 2010 35.53 0 2101331..2102377 + 348 78778212 - Suden_2018 - OmpA/MotB 2011 31.79 0 2102377..2102958 + 193 78778213 - Suden_2019 - molybdopterin-guanine dinucleotide biosynthesis protein A 2012 37.37 0 2103030..2103500 + 156 78778214 moaC Suden_2020 - molybdenum cofactor biosynthesis protein C 2013 33.70 0 2103481..2103750 + 89 78778215 - Suden_2021 - hypothetical protein 2014 34.98 0 2103763..2104734 + 323 78778216 - Suden_2022 - hypothetical protein 2015 38.53 +1 2104789..2105865 - 358 78778217 - Suden_2023 - chorismate synthase 2016 38.33 +1 2105865..2106545 - 226 78778218 rnc Suden_2024 - ribonuclease III 2017 37.50 0 2106542..2106973 - 143 78778219 rnhA Suden_2025 - ribonuclease H 2018 31.33 0 2106948..2107994 - 348 78778220 - Suden_2026 - TPR repeat-containing protein 2019 32.05 0 2107994..2108461 - 155 78778221 - Suden_2027 - hypothetical protein 2020 39.35 +1 2108532..2109578 - 348 78778222 - Suden_2028 - hypothetical protein 2021 33.56 0 2109682..2113167 - 1161 78778223 - Suden_2029 - hypothetical protein 34.46 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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