version 1.0
Sulfurimonas denitrificans DSM 1251, complete genome - 1..2201561 2096 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1819 36.68 0 1911817..1912623 - 268 78778021 - Suden_1827 - NADH dehydrogenase subunit C 1820 40.00 +1 1912623..1913132 - 169 78778022 - Suden_1828 - NADH dehydrogenase subunit B 1821 34.87 0 1913114..1913503 - 129 78778023 - Suden_1829 - NADH dehydrogenase subunit A 1822 34.57 0 1913795..1914442 + 215 78778024 - Suden_1830 - hypothetical protein 1823 36.22 0 1914456..1914905 - 149 78778025 - Suden_1831 - guanine deaminase 1824 33.62 0 1914913..1915263 - 116 78778026 - Suden_1832 - cobalamin (vitamin B12) biosynthesis CbiX protein 1825 35.12 0 1915274..1917010 - 578 78778027 - Suden_1833 - AAA ATPase 1826 38.89 +1 1917019..1918260 - 413 78778028 - Suden_1834 - hypothetical protein 1827 37.47 0 1918311..1919156 - 281 78778029 - Suden_1835 - endonuclease IV 1828 31.42 0 1919149..1919619 - 156 78778030 - Suden_1836 - putative lipoprotein 1829 34.68 0 1919753..1920199 + 148 78778031 - Suden_1837 - TM2 1830 36.76 0 1920380..1920817 - 145 78778032 - Suden_1838 - hemerythrin HHE cation binding region 1831 28.67 -1 1921538..1923511 - 657 78778033 - Suden_1839 - DNA (cytosine-5-)-methyltransferase., Type II site-specific deoxyribonuclease 1832 37.83 +1 1923620..1924954 + 444 78778034 - Suden_1840 - DNA-directed DNA polymerase 1833 35.24 0 1924967..1925908 + 313 78778035 - Suden_1841 - DUF234 DEXX-box ATPase 1834 34.08 0 1925946..1926746 - 266 78778036 - Suden_1842 - heat shock protein DnaJ-like 1835 41.14 +2 1926818..1927291 - 157 78778037 - Suden_1843 - hypothetical protein 1836 39.72 +1 1927296..1928156 - 286 78778038 - Suden_1844 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1837 33.80 0 1928169..1929245 - 358 78778039 - Suden_1845 - hypothetical protein 1838 35.28 0 1929384..1930409 - 341 78778040 - Suden_1846 - hypothetical protein 1839 37.11 0 1930460..1930777 - 105 78778041 - Suden_1847 - hypothetical protein 1840 36.50 0 1930767..1931555 - 262 78778042 - Suden_1848 - hypothetical protein 1841 38.48 +1 1931552..1932541 - 329 78778043 - Suden_1849 - radical SAM family protein 1842 36.47 0 1932522..1933094 - 190 78778044 - Suden_1850 - AMMECR1 1843 39.31 +1 1933105..1933974 - 289 78778045 - Suden_1851 - hypothetical protein 1844 37.22 0 1934031..1936268 - 745 78778046 - Suden_1852 - ATPase 1845 31.23 0 1936261..1937544 - 427 78778047 - Suden_1853 - ATPase 1846 26.64 -2 1937613..1939016 - 467 78778048 - Suden_1854 - DNA mismatch repair enzyme MutH 1847 35.09 0 1939017..1940324 - 435 78778049 - Suden_1855 - DNA (cytosine-5-)-methyltransferase 1848 39.97 +1 1940540..1941247 + 235 78778050 - Suden_1856 - Short-chain dehydrogenase/reductase SDR 1849 41.27 +2 1941254..1942135 - 293 78778051 glyQ Suden_1857 - glycyl-tRNA synthetase subunit alpha 1850 33.04 0 1942180..1942860 - 226 78778052 - Suden_1858 - MerR family transcriptional regulator 1851 35.59 0 1942960..1943490 + 176 78778053 - Suden_1859 - alkylhydroperoxidase AhpD core 1852 34.46 0 1943493..1943936 + 147 78778054 - Suden_1860 - hypothetical protein 1853 33.10 0 1943941..1944798 - 285 78778055 - Suden_1861 - hypothetical protein 1854 36.08 0 1944814..1945287 - 157 78778056 - Suden_1862 - hypothetical protein 1855 38.76 +1 1945459..1945956 - 165 78778057 - Suden_1863 - phosphoribosylaminoimidazole carboxylase 1856 38.67 +1 1946036..1947328 - 430 78778058 - Suden_1864 - peptidase U32 1857 35.78 0 1947325..1948059 - 244 78778059 - Suden_1865 - hypothetical protein 1858 32.95 0 1948146..1948925 + 259 78778060 - Suden_1866 - histidinol phosphate phosphatase, HisJ 1859 34.89 0 1949003..1949323 + 106 78778061 - Suden_1867 - thioredoxin 1860 30.00 -1 1949401..1949820 + 139 78778062 - Suden_1868 - hypothetical protein 1861 39.15 +1 1949834..1950778 + 314 78778063 - Suden_1869 - thioredoxin reductase 1862 37.24 0 1950820..1951587 + 255 78778064 - Suden_1870 - dihydrodipicolinate reductase 1863 37.98 +1 1951658..1953013 + 451 78778065 - Suden_1871 - amidophosphoribosyltransferase 1864 34.58 0 1953013..1953972 + 319 78778066 - Suden_1872 - hypothetical protein 1865 29.95 -1 1953969..1954529 - 186 78778067 - Suden_1873 - hypothetical protein 1866 30.20 -1 1954526..1955035 - 169 78778068 - Suden_1874 - hypothetical protein 1867 37.30 0 1955042..1955722 - 226 78778069 - Suden_1875 - phosphoribosyl-AMP cyclohydrolase 1868 38.87 +1 1955729..1956847 - 372 78778070 - Suden_1876 - Band 7 protein 1869 38.44 +1 1956867..1957787 - 306 78778071 - Suden_1877 - branched-chain amino acid aminotransferase 1870 37.01 0 1958037..1958390 - 117 78778072 - Suden_1878 - hypothetical protein 1871 37.95 +1 1958400..1959590 - 396 78778073 - Suden_1879 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1872 36.16 0 1959697..1960368 - 223 78778074 - Suden_1880 - two component transcriptional regulator 1873 33.05 0 1960370..1961797 - 475 78778075 - Suden_1881 - PAS/PAC sensor signal transduction histidine kinase 1874 37.11 0 1961895..1963085 - 396 78778076 - Suden_1882 - hypothetical protein 1875 36.92 0 1963269..1964273 - 334 78778077 - Suden_1883 - periplasmic phosphate binding protein 1876 34.04 0 1964338..1965192 - 284 78778078 - Suden_1884 - hypothetical protein 1877 36.01 0 1965300..1966157 + 285 78778079 - Suden_1885 - phosphate ABC transporter permease 1878 37.23 0 1966157..1967002 + 281 78778080 - Suden_1886 - phosphate ABC transporter permease 1879 35.50 0 1967002..1967787 + 261 78778081 - Suden_1887 - phosphate ABC transporter permease 1880 31.40 0 1967833..1968504 + 223 78778082 - Suden_1888 - phosphate uptake regulator-like 1881 36.76 0 1968587..1970017 + 476 78778083 - Suden_1889 - glutamine synthetase type I 1882 37.13 0 1970163..1971821 + 552 78778084 - Suden_1890 - 2-isopropylmalate synthase 1883 34.99 0 1971961..1972383 + 140 78778085 - Suden_1891 - hypothetical protein 1884 36.59 0 1972411..1974378 - 655 78778086 - Suden_1892 - penicillin-binding protein 1A 1885 36.96 0 1974375..1975064 - 229 78778087 - Suden_1893 - ABC transporter-related protein 1886 35.25 0 1975061..1976155 - 364 78778088 - Suden_1894 - aminotransferase, class I and II 1887 30.28 -1 1976155..1977822 - 555 78778089 - Suden_1895 - diguanylate cyclase 1888 34.61 0 1977957..1978505 - 182 78778090 - Suden_1896 - Maf-like protein 1889 34.99 0 1978506..1978988 - 160 78778091 - Suden_1897 - hypothetical protein 1890 39.08 +1 1978988..1981543 - 851 78778092 alaS Suden_1898 - alanyl-tRNA synthetase 1891 39.05 +1 1981609..1983024 - 471 78778093 - Suden_1899 - aldehyde dehydrogenase 1892 33.84 0 1983286..1983678 + 130 78778094 - Suden_1900 - hypothetical protein 1893 35.76 0 1983675..1984004 - 109 78778095 - Suden_1901 - formate dehydrogenase H large subunit 1894 37.14 0 1984004..1986079 - 691 78778096 - Suden_1902 - molybdopterin oxidoreductase 1895 35.25 0 1986104..1986832 - 242 78778097 - Suden_1903 - Short-chain dehydrogenase/reductase SDR 1896 36.26 0 1986839..1988101 - 420 78778098 - Suden_1904 - homoserine dehydrogenase 1897 37.85 +1 1988140..1989357 - 405 78778099 - Suden_1905 - aspartate aminotransferase 1898 30.68 -1 1989426..1990253 - 275 78778100 - Suden_1906 - hypothetical protein 1899 31.40 0 1990247..1991179 - 310 78778101 - Suden_1907 - hypothetical protein 1900 36.42 0 1991176..1991856 - 226 78778102 - Suden_1908 - RNA methyltransferase TrmH, group 3 1901 35.78 0 1991895..1992710 - 271 78778103 - Suden_1909 - hypothetical protein 1902 33.33 0 1992723..1992923 - 66 78778104 rpmE Suden_1910 - 50S ribosomal protein L31 1903 34.96 0 1993040..1993717 - 225 78778105 - Suden_1911 - hypothetical protein 1904 35.61 0 1994018..1995379 + 453 78778106 - Suden_1912 - molybdopterin binding domain-containing protein 1905 33.85 0 1995359..1995940 - 193 78778107 - Suden_1913 - 6-pyruvoyl tetrahydrobiopterin synthase-like 1906 34.98 0 1995940..1996605 - 221 78778108 - Suden_1914 - hypothetical protein 1907 37.68 0 1996698..1997663 - 321 78778109 moaA Suden_1915 - molybdenum cofactor biosynthesis protein A 1908 34.74 0 1997855..1998496 - 213 78778110 - Suden_1916 - hypothetical protein 1909 35.93 0 1998655..1999926 - 423 78778111 - Suden_1917 - hypothetical protein 1910 29.89 -1 2000251..2000715 + 154 78778112 - Suden_1918 - RDD protein 1911 37.97 +1 2000957..2001904 - 315 78778113 - Suden_1919 - ubiquinol cytochrome c oxidoreductase, cytochrome C1 subunit 1912 36.13 0 2001915..2003129 - 404 78778114 - Suden_1920 - cytochrome b/b6-like 1913 42.77 +2 2003142..2003639 - 165 78778115 - Suden_1921 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 1914 30.80 -1 2003726..2004592 - 288 78778116 - Suden_1922 - hypothetical protein 1915 38.54 +1 2004614..2006494 - 626 78778117 - Suden_1923 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1916 35.51 0 2006674..2007777 + 367 78778118 - Suden_1924 - response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase 1917 31.97 0 2007774..2008139 + 121 78778119 - Suden_1925 - response regulator receiver domain-containing protein 1918 30.09 -1 2008143..2010236 + 697 78778120 - Suden_1926 - PAS/PAC sensor signal transduction histidine kinase 34.46 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0