IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 38.26   STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
949	 42.86	+1	967508..968830	+	440	71903615	-	M28_Spy0950	-	Na(+)-linked D-alanine glycine permease
950	 36.17	0	968950..970185	+	411	71903617	-	M28_Spy0952	-	cobalt-zinc-cadmium resistance protein czcD
951	 35.92	0	970555..971328	-	257	71903618	cfa	M28_Spy0953	-	cAMP factor
952	 33.21	-1	971698..972534	-	278	71903619	-	M28_Spy0954	-	histidine-binding protein
953	 39.37	0	972550..973179	-	209	71903620	-	M28_Spy0955	-	histidine transport ATP-binding protein P
954	 35.98	0	973189..973830	-	213	71903621	-	M28_Spy0956	-	histidine transport system permease protein M
955	 38.39	0	973937..974272	-	111	71903622	-	M28_Spy0957	-	PhnA
956	 41.32	0	974468..976282	-	604	71903623	glmS	M28_Spy0958	-	D-fructose-6-phosphate amidotransferase
957	 33.33	-1	976458..977015	-	185	71903624	sipC	M28_Spy0959	-	signal peptidase I
958	 40.25	0	977233..978735	-	500	71903625	pyk	M28_Spy0960	-	pyruvate kinase
959	 43.29	+1	978798..979811	-	337	71903626	pfkA	M28_Spy0961	-	6-phosphofructokinase
960	 37.77	0	979891..983001	-	1036	71903627	dnaE	M28_Spy0962	-	DNA polymerase III DnaE
961	 35.71	0	983096..983557	+	153	71903628	-	M28_Spy0963	-	GntR family transcriptional regulator
962	 35.19	0	983557..984255	+	232	71903629	-	M28_Spy0964	-	ABC transporter ATP-binding protein
963	 31.30	-1	984265..985050	+	261	71903630	-	M28_Spy0965	-	ABC transporter permease protein
964	 32.68	-1	985177..985791	-	204	71903631	-	M28_Spy0966	-	putative membrane-associated alkaline phosphatase
965	 41.27	0	986382..986570	-	62	71903632	-	M28_Spy0967	-	phage protein
966	 36.50	0	986810..987568	+	252	71903633	spd1	M28_Spy0968	-	streptococcal phage DNase1
967	 28.53	-2	987679..988386	+	235	71903634	speC	M28_Spy0969	-	exotoxin type C precursor
968	 38.28	0	988462..989796	-	444	71903635	-	M28_Spy0970	-	phage-associated lysin
969	 38.17	0	989908..990093	-	61	71903636	-	M28_Spy0971	-	phage protein
970	 37.71	0	990090..990386	-	98	71903637	-	M28_Spy0972	-	phage protein
971	 43.53	+1	990397..991014	-	205	71903638	-	M28_Spy0973	-	phage protein
972	 32.10	-1	991017..991178	-	53	71903639	-	M28_Spy0974	-	phage protein
973	 42.35	+1	991192..993087	-	631	71903640	-	M28_Spy0975	-	phage protein
974	 27.58	-2	993098..993427	-	109	71903641	-	M28_Spy0976	-	phage protein
975	 40.66	0	993414..994628	-	404	71903642	-	M28_Spy0977	-	phage protein
976	 41.12	0	994625..996679	-	684	71903643	-	M28_Spy0978	-	phage protein
977	 35.00	0	996676..997455	-	259	71903644	-	M28_Spy0979	-	phage protein
978	 44.09	+1	997487..1001122	-	1211	71903645	-	M28_Spy0980	-	phage protein
979	 35.19	0	1001137..1001460	-	107	71903646	-	M28_Spy0981	-	phage protein
980	 36.59	0	1001508..1001906	-	132	71903647	-	M28_Spy0982	-	phage protein
981	 37.67	0	1001915..1002583	-	222	71903648	-	M28_Spy0983	-	phage protein
982	 37.69	0	1002593..1002982	-	129	71903649	-	M28_Spy0984	-	phage protein
983	 38.25	0	1002979..1003344	-	121	71903650	-	M28_Spy0985	-	phage protein
984	 39.16	0	1003325..1003633	-	102	71903651	-	M28_Spy0986	-	phage protein
985	 37.98	0	1003630..1003995	-	121	71903652	-	M28_Spy0987	-	phage protein
986	 38.27	0	1003997..1004239	-	80	71903653	-	M28_Spy0988	-	phage protein
987	 39.43	0	1004249..1005331	-	360	71903654	-	M28_Spy0989	-	phage protein
988	 39.90	0	1005334..1005714	-	126	71903655	-	M28_Spy0990	-	phage protein
989	 42.73	+1	1005724..1006266	-	180	71903656	-	M28_Spy0991	-	phage protein
990	 33.33	-1	1006401..1006667	-	88	71903657	-	M28_Spy0992	-	phage protein
991	 39.05	0	1006670..1006984	-	104	71903658	-	M28_Spy0993	-	phage protein
992	 30.65	-1	1007054..1007239	-	61	71903659	-	M28_Spy0994	-	phage protein
993	 37.04	0	1007243..1008805	-	520	71903660	-	M28_Spy0995	-	phage protein
994	 41.85	0	1008786..1010288	-	500	71903661	-	M28_Spy0996	-	portal protein
995	 37.21	0	1010300..1011613	-	437	71903662	-	M28_Spy0997	-	terminase large subunit
996	 38.46	0	1011585..1012130	-	181	71903663	-	M28_Spy0998	-	phage terminase small subunit
997	 37.41	0	1012313..1012729	+	138	71903664	-	M28_Spy0999	-	phage protein
998	 28.63	-2	1013347..1014261	-	304	71903665	-	M28_Spy1000	-	phage protein
999	 42.79	+1	1014312..1014533	-	73	71903666	-	M28_Spy1001	-	phage protein
1000	 40.69	0	1014839..1015273	-	144	71903667	-	M28_Spy1002	-	ArpU family phage encoded transcriptional regulator
1001	 32.53	-1	1015722..1016216	-	164	71903668	-	M28_Spy1003	-	phage protein
1002	 37.48	0	1016206..1016904	-	232	71903669	-	M28_Spy1004	-	phage protein
1003	 40.00	0	1016840..1017124	-	94	71903670	-	M28_Spy1005	-	phage protein
1004	 37.95	0	1017121..1017315	-	64	71903671	-	M28_Spy1006	-	phage protein
1005	 36.25	0	1017288..1017527	-	79	71903672	-	M28_Spy1007	-	phage protein
1006	 34.96	0	1017524..1017769	-	81	71903673	-	M28_Spy1008	-	phage protein
1007	 37.54	0	1017766..1018122	-	118	71903674	-	M28_Spy1009	-	phage protein
1008	 38.25	0	1018106..1018390	-	94	71903675	-	M28_Spy1010	-	phage protein
1009	 34.13	-1	1018410..1019291	-	293	71903676	-	M28_Spy1011	-	phage protein
1010	 34.43	0	1019548..1021101	-	517	71903677	-	M28_Spy1012	-	phage protein
1011	 38.51	0	1021119..1021601	-	160	71903678	-	M28_Spy1013	-	phage protein
1012	 36.11	0	1021606..1022973	-	455	71903679	-	M28_Spy1014	-	phage DNA/RNA helicase
1013	 38.60	0	1023045..1023728	-	227	71903680	-	M28_Spy1015	-	phage protein
1014	 29.12	-2	1023725..1024009	-	94	71903681	-	M28_Spy1016	-	phage protein
1015	 31.28	-1	1024006..1024200	-	64	71903682	-	M28_Spy1017	-	phage protein
1016	 32.12	-1	1024200..1024529	-	109	71903683	-	M28_Spy1018	-	phage protein
1017	 36.96	0	1024610..1024747	-	45	71903684	-	M28_Spy1019	-	phage protein
1018	 37.37	0	1024744..1025040	-	98	71903685	-	M28_Spy1020	-	phage protein
1019	 32.85	-1	1025119..1025325	-	68	71903686	-	M28_Spy1021	-	phage protein
1020	 34.17	-1	1025471..1025710	+	79	71903687	-	M28_Spy1022	-	phage protein
1021	 32.38	-1	1025860..1026069	+	69	71903688	-	M28_Spy1023	-	phage protein
1022	 30.32	-1	1026274..1026837	+	187	71903689	-	M28_Spy1024	-	phage protein
1023	 28.07	-2	1026945..1027172	-	75	71903691	-	M28_Spy1026	-	phage protein
1024	 33.53	-1	1027135..1027632	+	165	71903690	-	M28_Spy1025	-	phage protein
1025	 35.24	0	1027621..1027830	-	69	71903692	-	M28_Spy1027	-	phage protein
1026	 31.67	-1	1027884..1028483	+	199	71903693	-	M28_Spy1028	-	phage protein
1027	 38.99	0	1028513..1028671	-	52	71903694	-	M28_Spy1029	-	phage protein
1028	 35.89	0	1029438..1030181	+	247	71903695	-	M28_Spy1030	-	phage transcriptional repressor
1029	 34.57	0	1030194..1031003	+	269	71903696	-	M28_Spy1031	-	phage protein
1030	 39.87	0	1031060..1031212	-	50	71903697	-	M28_Spy1032	-	phage protein
1031	 33.51	-1	1031217..1032341	+	374	71903698	-	M28_Spy1033	-	DNA integration/recombination/invertion protein
1032	 35.96	0	1032473..1032586	+	37	71903699	-	M28_Spy1034	-	hypothetical protein
1033	 36.39	0	1032704..1033324	+	206	71903700	-	M28_Spy1035	-	hypothetical protein
1034	 38.01	0	1033581..1035845	-	754	71903701	glgP	M28_Spy1036	-	glycogen phosphorylase
1035	 37.22	0	1035880..1037373	-	497	71903702	malM	M28_Spy1037	-	4-alpha-glucanotransferase
1036	 32.69	-1	1037489..1038583	-	364	71903703	malR	M28_Spy1038	-	LacI family transcription regulator
1037	 38.94	0	1038751..1039998	+	415	71903704	malE	M28_Spy1039	-	maltose/maltodextrin-binding protein
1038	 37.00	0	1040272..1041633	+	453	71903705	malF	M28_Spy1040	-	maltose transport system permease protein
1039	 36.20	0	1041633..1042469	+	278	71903706	malG	M28_Spy1041	-	maltose transport system permease protein
1040	 38.95	0	1042624..1043424	+	266	71903707	-	M28_Spy1042	-	LacI family transcription regulator
1041	 40.56	0	1043540..1044355	-	271	71903708	malA	M28_Spy1043	-	maltodextrose utilization protein
1042	 39.61	0	1044377..1045237	-	286	71903709	malD	M28_Spy1044	-	maltodextrin transport system permease protein
1043	 38.69	0	1045234..1046541	-	435	71903710	malC	M28_Spy1045	-	maltose transport system permease protein
1044	 36.03	0	1046616..1048802	-	728	71903711	amyA	M28_Spy1046	-	alpha-amylase
1045	 38.29	0	1048777..1050492	-	571	71903712	amyB	M28_Spy1047	-	cyclomaltodextrinase
1046	 38.27	0	1050646..1051941	-	431	71903713	malX	M28_Spy1048	-	maltose/maltodextrin-binding protein
1047	 32.44	-1	1052225..1052449	+	74	71903714	-	M28_Spy1049	-	transposase
1048	 36.08	0	1052514..1053497	-	327	71903715	-	M28_Spy1050	-	esterase
38.26	MEAN

3.98	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.