IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
835	 37.22	0	855532..856611	+	359	71903502	prfA	M28_Spy0837	-	peptide chain release factor 1
836	 35.71	0	856611..857450	+	279	71903503	hemK	M28_Spy0838	-	peptide release factor-glutamine N5-methyltransferase
837	 37.84	0	857404..858024	+	206	71903504	-	M28_Spy0839	-	SUA5 protein
838	 41.50	0	858042..858494	+	150	71903505	-	M28_Spy0840	-	phosphinothricin N-acetyltransferase
839	 42.12	0	858478..859740	+	420	71903506	glyA	M28_Spy0841	-	serine hydroxymethyltransferase
840	 35.28	0	859747..860724	+	325	71903507	-	M28_Spy0842	-	hypothetical protein
841	 38.67	0	860725..861324	+	199	71903508	-	M28_Spy0843	-	antigen
842	 39.15	0	861334..863052	+	572	71903509	-	M28_Spy0844	-	multidrug resistance ABC transporter ATP-binding and permease protein
843	 38.48	0	863055..864782	+	575	71903510	-	M28_Spy0845	-	multidrug resistance ABC transporter ATP-binding and permease protein
844	 39.75	0	865023..866393	+	456	71903511	nox	M28_Spy0846	-	NADH oxidase H2O-forming
845	 40.96	0	866552..867535	-	327	71903512	ldh	M28_Spy0847	-	L-lactate dehydrogenase
846	 40.05	0	867726..870212	+	828	71903513	gyrA	M28_Spy0848	-	DNA gyrase subunit A
847	 35.60	0	870232..870981	+	249	71903514	-	M28_Spy0849	-	sortase
848	 35.73	0	871061..871477	+	138	71903515	-	M28_Spy0850	-	lactoylglutathione lyase
849	 26.67	-2	871964..872083	+	39	71903516	-	M28_Spy0851	-	hypothetical protein
850	 37.20	0	872034..872525	+	163	71903517	-	M28_Spy0852	-	hypothetical protein
851	 38.27	0	872575..873486	-	303	71903518	-	M28_Spy0853	-	hypothetical protein
852	 37.79	0	873603..874253	-	216	71903519	-	M28_Spy0854	-	hypothetical protein
853	 37.19	0	874250..874690	-	146	71903520	-	M28_Spy0855	-	putative cytoplasmic protein
854	 38.16	0	874909..875757	+	282	71903521	rbgA	M28_Spy0856	-	ribosomal biogenesis GTPase
855	 41.42	0	875822..876538	+	238	71903522	rnhB	M28_Spy0857	-	ribonuclease HII
856	 39.19	0	876603..877439	+	278	71903523	smf	M28_Spy0858	-	hypothetical protein
857	 38.12	0	877546..879675	+	709	71903524	-	M28_Spy0859	-	DNA topoisomerase I
858	 36.44	0	879750..880232	-	160	71903525	-	M28_Spy0860	-	LysR family transcriptional regulator
859	 30.08	-2	880239..880361	-	40	71903526	-	M28_Spy0861	-	LysR family transcriptional regulator
860	 38.28	0	880647..881192	+	181	71903527	-	M28_Spy0862	-	regulatory protein
861	 38.96	0	881204..882199	+	331	71903528	ddh	M28_Spy0863	-	D-lactate dehydrogenase
862	 36.79	0	882304..882969	+	221	71903529	satD	M28_Spy0864	-	hypothetical protein
863	 38.49	0	882962..883678	+	238	71903530	satE	M28_Spy0865	-	hypothetical protein
864	 43.66	+1	883776..885170	+	464	71903531	gid	M28_Spy0866	-	tRNA (uracil-5-)-methyltransferase Gid
865	 41.79	0	885323..886729	+	468	71903532	oadA2	M28_Spy0867	-	oxaloacetate decarboxylase
866	 37.78	0	886772..887086	+	104	71903533	-	M28_Spy0868	-	hypothetical protein
867	 42.74	+1	887086..887436	+	116	71903534	-	M28_Spy0869	-	biotin carboxyl carrier protein of oxaloacetate decarboxylase
868	 42.97	+1	887446..888576	+	376	71903535	-	M28_Spy0870	-	oxaloacetate decarboxylase beta chain
869	 40.90	0	888777..889661	-	294	71903536	-	M28_Spy0871	-	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
870	 35.92	0	889654..890349	-	231	71903537	citG	M28_Spy0872	-	GntR family transcriptional regulator
871	 40.56	0	890507..891931	-	474	71903538	-	M28_Spy0873	-	Mg2+/citrate complex secondary transporter
872	 38.58	0	892290..892613	+	107	71903539	-	M28_Spy0874	-	hypothetical protein
873	 46.37	+2	892667..893065	+	132	162139401	-	M28_Spy0875	-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
874	 41.80	0	893110..894231	+	373	71903541	oadB	M28_Spy0876	-	oxaloacetate decarboxylase beta chain
875	 37.78	0	894249..894383	+	44	71903542	-	M28_Spy0877	-	hypothetical protein
876	 41.75	0	894419..894727	+	102	71903543	citD	M28_Spy0878	-	citrate lyase subunit gamma
877	 42.45	+1	894715..895602	+	295	71903544	citE	M28_Spy0879	-	citrate lyase beta chain
878	 42.79	+1	895605..897137	+	510	71903545	citF	M28_Spy0880	-	citrate CoA-transferase
879	 41.28	0	897067..897708	+	213	71903546	citX	M28_Spy0881	-	2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase
880	 42.82	+1	897705..899117	+	470	71903547	oadA1	M28_Spy0882	-	oxaloacetate decarboxylase
881	 38.46	0	899227..900279	-	350	71903548	citC	M28_Spy0883	-	[citrate [pro-3S]-lyase] ligase
882	 36.44	0	900368..900850	-	160	71903549	-	M28_Spy0884	-	hypothetical protein
883	 37.40	0	901549..902655	-	368	71903550	xerS	M28_Spy0885	-	site-specific tyrosine recombinase XerS
884	 32.62	-1	903089..903787	+	232	71903551	-	M28_Spy0886	-	phage transcriptional repressor
885	 40.54	0	903922..905490	-	522	71903552	ffh	M28_Spy0887	-	signal recognition particle, subunit FFH/SRP54
886	 33.04	-1	905499..905840	-	113	71903553	ylxM	M28_Spy0888	-	hypothetical protein
887	 39.26	0	905929..906654	-	241	71903554	-	M28_Spy0889	-	GntR family transcriptional regulator
888	 35.15	0	906710..908143	-	477	71903555	-	M28_Spy0890	-	hypothetical protein
889	 40.75	0	908310..909872	+	520	71903556	guaA	M28_Spy0891	-	bifunctional GMP synthase/glutamine amidotransferase protein
890	 35.21	0	909914..911137	-	407	71903557	-	M28_Spy0892	-	UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase
891	 36.81	0	911504..913084	-	526	71903558	-	M28_Spy0893	-	ABC transporter ATP-binding protein
892	 33.15	-1	913182..913739	-	185	71903559	pdxK	M28_Spy0894	-	hypothetical protein
893	 33.91	-1	913717..914583	-	288	71903560	-	M28_Spy0895	-	pyridoxamine kinase
894	 33.49	-1	914673..915941	+	422	71903561	-	M28_Spy0896	-	aminotransferase class-I
895	 35.85	0	916349..916705	-	118	71903562	rnhB	M28_Spy0897	-	anaerobic ribonucleoside-triphosphate reductase
896	 33.71	-1	917027..918604	-	525	71903563	-	M28_Spy0898	-	cardiolipin synthetase
897	 42.91	+1	918689..920359	-	556	71903564	fhs.1	M28_Spy0899	-	formate--tetrahydrofolate ligase
898	 38.73	0	920487..921506	-	339	71903565	lplA	M28_Spy0900	-	lipoate-protein ligase A
899	 40.36	0	921553..922434	-	293	71903566	-	M28_Spy0901	-	SIR2 family protein
900	 40.71	0	922427..923239	-	270	71903567	-	M28_Spy0902	-	hypothetical protein
901	 40.24	0	923232..923564	-	110	71903568	-	M28_Spy0903	-	glycine cleavage system H protein
902	 39.34	0	923606..924604	-	332	71903569	-	M28_Spy0904	-	luciferase-like monooxygenase
903	 40.67	0	924601..925800	-	399	71903570	-	M28_Spy0905	-	NADH-dependent flavin oxidoreductase yqiG
904	 39.67	0	925797..926648	-	283	71903571	-	M28_Spy0906	-	lipoate-protein ligase A
905	 36.51	0	926829..927521	+	230	71903572	dpfB	M28_Spy0907	-	phosphopantothenate--cysteine ligase
906	 35.90	0	927514..928059	+	181	71903573	dfp	M28_Spy0908	-	phosphopantothenoylcysteine decarboxylase
907	 33.16	-1	928105..928686	+	193	71903574	-	M28_Spy0909	-	transporter
908	 37.93	0	928861..930579	+	572	71903575	pgmA	M28_Spy0910	-	phosphoglucomutase
909	 38.60	0	930797..931765	-	322	71903576	-	M28_Spy0911	-	nucleoside transport system permease protein
910	 37.64	0	931755..932846	-	363	71903577	-	M28_Spy0912	-	nucleoside transport system permease protein
911	 37.40	0	932812..934362	-	516	71903578	-	M28_Spy0913	-	nucleoside transport ATP-binding protein
912	 38.65	0	934483..935535	-	350	71903579	-	M28_Spy0914	-	nucleoside-binding protein
913	 35.90	0	935629..936018	-	129	71903580	cdd	M28_Spy0915	-	cytidine deaminase
914	 33.01	-1	936669..937295	-	208	71903581	-	M28_Spy0916	-	16S rRNA m(2)G 1207 methyltransferase
915	 31.81	-1	937530..938450	+	306	71903582	coaA	M28_Spy0917	-	pantothenate kinase
916	 39.74	0	938519..938752	+	77	162139400	rpsT	M28_Spy0918	-	30S ribosomal protein S20
917	 31.50	-1	938877..940187	-	436	71903584	ciaH	M28_Spy0919	-	sensor protein
918	 31.85	-1	940180..940854	-	224	71903585	ciaR	M28_Spy0920	-	transcriptional regulatory protein
919	 36.53	0	941201..943798	-	865	71903586	pepN	M28_Spy0921	-	alanine aminopeptidase
920	 30.95	-1	943795..944004	-	69	71903587	-	M28_Spy0922	-	hypothetical protein
921	 35.32	0	943943..944596	-	217	71903588	phoU	M28_Spy0923	-	phosphate transport system protein
922	 39.11	0	944664..945425	-	253	71903589	pstB	M28_Spy0924	-	phosphate transport ATP-binding protein
923	 39.30	0	945435..946238	-	267	71903590	pstB2	M28_Spy0925	-	phosphate transport ATP-binding protein
924	 40.54	0	946254..947141	-	295	71903591	pstA	M28_Spy0926	-	phosphate transport system permease protein
925	 42.87	+1	947131..947979	-	282	71903592	pstC	M28_Spy0927	-	phosphate transport system permease protein
926	 38.29	0	948076..948942	-	288	71903593	pstS	M28_Spy0928	-	phosphate-binding protein
927	 40.66	0	949081..950391	-	436	71903594	-	M28_Spy0929	-	16S rRNA m(5)C 967 methyltransferase
928	 39.26	0	950394..951203	-	269	71903595	-	M28_Spy0930	-	myo-inositol-1(or 4)-monophosphatase
929	 33.33	-1	951172..951462	-	96	71903596	-	M28_Spy0931	-	hypothetical protein
930	 34.81	0	951452..951856	-	134	71903597	spxA	M28_Spy0932	-	transcriptional regulator Spx
931	 34.08	-1	951899..952831	-	310	71903598	mreA	M28_Spy0933	-	bifunctional riboflavin kinase/FMN adenylyltransferase
932	 41.24	0	952860..953744	-	294	71903599	truB	M28_Spy0934	-	tRNA pseudouridine synthase B
933	 38.78	0	953860..955200	-	446	71903600	-	M28_Spy0935	-	hypothetical protein
934	 36.68	0	955297..956253	-	318	71903601	-	M28_Spy0936	-	integral membrane protein
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.