IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 38.26   STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
36	 36.07	0	55487..55888	+	133	71902703	-	M28_Spy0037	-	hypothetical protein
37	 36.54	0	55885..57660	+	591	71902704	-	M28_Spy0038	-	acyltransferase
38	 40.33	0	57969..60611	+	880	71902705	-	M28_Spy0039	-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase
39	 42.48	+1	60863..61879	+	338	71902706	adhA	M28_Spy0040	-	alcohol dehydrogenase
40	 41.40	0	62267..63556	+	429	71902707	-	M28_Spy0041	-	Na+ driven multidrug efflux pump
41	 40.13	0	63755..64063	+	102	71902708	rpsJ	M28_Spy0042	-	30S ribosomal protein S10
42	 41.79	0	64311..64937	+	208	71902709	rplC	M28_Spy0043	-	50S ribosomal protein L3
43	 42.47	+1	64961..65584	+	207	71902710	rplD	M28_Spy0044	-	50S ribosomal protein L4
44	 37.71	0	65584..65880	+	98	71902711	rplW	M28_Spy0045	-	50S ribosomal protein L23
45	 43.53	+1	65898..66731	+	277	71902712	rplB	M28_Spy0046	-	50S ribosomal protein L2
46	 40.50	0	66871..67149	+	92	162139417	rpsS	M28_Spy0047	-	30S ribosomal protein S19
47	 39.71	0	67165..67509	+	114	71902714	rplV	M28_Spy0048	-	50S ribosomal protein L22
48	 41.59	0	67522..68175	+	217	71902715	rpsC	M28_Spy0049	-	30S ribosomal protein S3
49	 43.24	+1	68179..68592	+	137	71902716	rplP	M28_Spy0050	-	50S ribosomal protein L16
50	 34.78	0	68602..68808	+	68	71902717	rpmC	M28_Spy0051	-	50S ribosomal protein L29
51	 37.93	0	68834..69094	+	86	71902718	rpsQ	M28_Spy0052	-	30S ribosomal protein S17
52	 44.17	+1	69119..69487	+	122	71902719	rplN	M28_Spy0053	-	50S ribosomal protein L14
53	 36.93	0	69566..69871	+	101	71902720	rplX	M28_Spy0054	-	50S ribosomal protein L24
54	 40.52	0	69895..70437	+	180	71902721	rplE	M28_Spy0055	-	50S ribosomal protein L5
55	 39.25	0	70453..70638	+	61	71902722	rpsN	M28_Spy0056	-	30S ribosomal protein S14
56	 36.84	0	70789..71187	+	132	71902723	rpsH	M28_Spy0057	-	30S ribosomal protein S8
57	 39.48	0	71390..71926	+	178	71902724	rplF	M28_Spy0058	-	50S ribosomal protein L6
58	 45.94	+1	72031..72387	+	118	162139416	rplR	M28_Spy0059	-	50S ribosomal protein L18
59	 42.42	+1	72406..72900	+	164	71902726	rpsE	M28_Spy0060	-	30S ribosomal protein S5
60	 37.16	0	72915..73097	+	60	71902727	rpmD	M28_Spy0061	-	50S ribosomal protein L30
61	 39.68	0	73312..73752	+	146	71902728	rplO	M28_Spy0062	-	50S ribosomal protein L15
62	 36.63	0	73769..75073	+	434	162139415	secY	M28_Spy0063	-	preprotein translocase subunit SecY
63	 39.44	0	75223..75861	+	212	71902730	adk	M28_Spy0064	-	adenylate kinase
64	 38.10	0	75925..76197	+	90	71902731	infA	M28_Spy0065	-	translation initiation factor IF-1
65	 37.61	0	76223..76339	+	38	71902732	rpmJ	M28_Spy0066	-	50S ribosomal protein L36
66	 39.34	0	76357..76722	+	121	71902733	rpsM	M28_Spy0067	-	30S ribosomal protein S13
67	 44.01	+1	76740..77123	+	127	71902734	rpsK	M28_Spy0068	-	30S ribosomal protein S11
68	 38.02	0	77169..78107	+	312	71902735	rpoA	M28_Spy0069	-	DNA-directed RNA polymerase subunit alpha
69	 40.57	0	78122..78508	+	128	71902736	rplQ	M28_Spy0070	-	50S ribosomal protein L17
70	 36.30	0	79104..79238	-	44	71902737	-	M28_Spy0071	-	hypothetical protein
71	 42.47	+1	85750..85935	+	61	71902738	-	M28_Spy0072	-	hypothetical protein
72	 42.72	+1	86573..86881	+	102	71902739	-	M28_Spy0073	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
73	 38.60	0	86921..87148	+	75	71902740	-	M28_Spy0074	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
74	 34.46	0	87258..87701	+	147	71902741	adcR	M28_Spy0075	-	MarR family transcriptional regulator
75	 41.25	0	87705..88424	+	239	71902742	adcC	M28_Spy0076	-	high-affinity zinc uptake system ATP-binding protein
76	 38.71	0	88378..89232	+	284	71902743	adcB	M28_Spy0077	-	high-affinity zinc uptake system membrane protein
77	 40.62	0	89272..89655	-	127	71902744	-	M28_Spy0078	-	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
78	 41.77	0	89706..90962	-	418	71902745	tyrS	M28_Spy0079	-	tyrosyl-tRNA synthetase
79	 40.29	0	91054..93366	+	770	71902746	pbp1b	M28_Spy0080	-	multimodular transpeptidase-transglycosylase PBP 1B
80	 42.98	+1	93630..97196	+	1188	71902747	rpoB	M28_Spy0081	-	DNA-directed RNA polymerase subunit beta
81	 43.93	+1	97287..100928	+	1213	71902748	rpoC	M28_Spy0082	-	DNA-directed RNA polymerase subunit beta'
82	 34.43	0	101080..101445	+	121	71902749	-	M28_Spy0083	-	putative DNA binding protein
83	 37.59	0	101538..102476	+	312	71902750	comYA	M28_Spy0084	-	ComG operon protein 1
84	 35.07	0	102355..103446	+	363	71902751	comYB	M28_Spy0085	-	ComG operon protein 2
85	 33.94	-1	103448..103774	+	108	71902752	comYC	M28_Spy0086	-	ComG operon protein 3
86	 34.27	-1	103749..104177	+	142	71902753	-	M28_Spy0087	-	ComG operon protein 4
87	 37.54	0	104134..104418	+	94	71902754	-	M28_Spy0088	-	hypothetical protein
88	 35.17	0	104411..104845	+	144	71902755	comYD	M28_Spy0089	-	ComG operon protein 6
89	 35.47	0	104829..105155	+	108	71902756	-	M28_Spy0090	-	ComG operon protein 6
90	 38.04	0	105208..106206	+	332	71902757	-	M28_Spy0091	-	adenine-specific methyltransferase
91	 39.01	0	106265..107461	+	398	71902758	ackA	M28_Spy0092	-	acetate kinase
92	 35.92	0	107648..107956	+	102	71902759	-	M28_Spy0093	-	hypothetical protein
93	 43.45	+1	108039..108809	-	256	71902760	proC	M28_Spy0094	-	pyrroline-5-carboxylate reductase
94	 45.41	+1	108857..109924	-	355	71902761	pepA	M28_Spy0095	-	glutamyl aminopeptidase
95	 38.18	0	110034..110198	-	54	71902762	-	M28_Spy0096	-	hypothetical protein
96	 37.76	0	110380..110673	+	97	71902763	-	M28_Spy0097	-	hypothetical protein
97	 34.59	0	110670..110987	+	105	71902764	trx.1	M28_Spy0098	-	thioredoxin
98	 42.42	+1	111005..111631	+	208	71902765	-	M28_Spy0099	-	tRNA-binding domain-containing protein
99	 38.89	0	111783..112178	+	131	71902766	ssb	M28_Spy0100	-	single-strand DNA-binding protein
100	 39.86	0	112439..113128	-	229	71902767	-	M28_Spy0101	-	deoxyadenosine kinase
101	 45.81	+1	113100..114149	-	349	71902768	-	M28_Spy0102	-	tRNA-dihydrouridine synthase
102	 42.15	0	114064..114936	-	290	71902769	hslO	M28_Spy0103	-	Hsp33-like chaperonin
103	 33.94	-1	115083..116576	-	497	71902770	rofA	M28_Spy0104	-	transcriptional regulator
104	 40.68	0	116807..118657	+	616	71902771	sfb1	M28_Spy0105	-	fibronectin binding protein 1
105	 38.28	0	118945..119793	+	282	71902772	-	M28_Spy0106	-	sortase
106	 35.74	0	120079..122322	+	747	71902773	cpa	M28_Spy0107	-	collagen-binding protein
107	 37.74	0	122315..122836	+	173	71902774	-	M28_Spy0108	-	signal peptidase I
108	 34.66	0	122843..123895	+	350	71902775	-	M28_Spy0109	-	hypothetical protein
109	 32.66	-1	123896..124636	+	246	71902776	eftLSL.B	M28_Spy0110	-	hypothetical protein
110	 36.67	0	124581..125240	+	219	71902777	-	M28_Spy0111	-	hypothetical protein
111	 34.08	-1	125399..126604	-	401	71902778	-	M28_Spy0112	-	AraC family transcriptional regulator
112	 38.83	0	126989..130483	+	1164	71902779	prtF2	M28_Spy0113	-	fibronectin binding protein
113	 35.14	0	130749..131246	-	165	71902780	-	M28_Spy0114	-	hypothetical protein
114	 39.58	0	131734..133173	+	479	71902781	atoE	M28_Spy0115	-	short-chain fatty acids transporter
115	 36.84	0	133243..134154	-	303	71902782	-	M28_Spy0116	-	LysR family transcriptional regulator
116	 42.19	0	134275..135459	+	394	71902783	-	M28_Spy0117	-	acetyl-CoA acetyltransferase
117	 39.47	0	135414..136130	+	238	71902784	atoD.2	M28_Spy0118	-	acetate CoA-transferase alpha subunit
118	 39.97	0	136133..136780	+	215	71902785	-	M28_Spy0119	-	acetyl-CoA:acetoacetyl-CoA transferase beta subunit
119	 35.39	0	136901..137581	-	226	71902786	-	M28_Spy0120	-	putative DNA-binding protein
120	 40.98	0	137755..138120	+	121	71902787	-	M28_Spy0121	-	translation initiation inhibitor
121	 40.29	0	138157..139176	+	339	71902788	sloR	M28_Spy0122	-	PfoR
122	 38.27	0	139627..139950	+	107	71902789	-	M28_Spy0123	-	hypothetical protein
123	 37.08	0	139940..141940	+	666	71902790	ntpI	M28_Spy0124	-	V-type ATP synthase subunit I
124	 40.83	0	141942..142421	+	159	162139414	ntpK	M28_Spy0125	-	V-type ATP synthase subunit K
125	 36.58	0	142489..143073	+	194	71902792	ntpE	M28_Spy0126	-	V-type sodium ATP synthase subunit E
126	 38.54	0	143089..144087	+	332	71902793	ntpC	M28_Spy0127	-	V-type ATP synthase subunit C
127	 38.94	0	144084..144404	+	106	71902794	ntpF	M28_Spy0128	-	V-type ATP synthase subunit F
128	 46.34	+2	144605..146380	+	591	71902795	ntpA	M28_Spy0129	-	V-type ATP synthase subunit A
129	 42.23	0	146381..147796	+	471	71902796	ntpB	M28_Spy0130	-	V-type ATP synthase subunit B
130	 37.96	0	147820..148467	+	215	71902797	ntpD	M28_Spy0131	-	V-type ATP synthase subunit D
131	 39.98	0	148587..149849	-	420	71902798	-	M28_Spy0132	-	toxic anion resistance protein
132	 38.23	0	149862..150740	-	292	71902799	-	M28_Spy0133	-	hypothetical protein
133	 43.62	+1	151178..152470	+	430	71902800	purA	M28_Spy0134	-	adenylosuccinate synthetase
134	 40.42	0	152797..153840	+	347	71902801	-	M28_Spy0135	-	nucleoside-binding protein
135	 41.08	0	153998..154552	+	184	71902802	nusG	M28_Spy0136	-	transcription antitermination protein NusG
38.26	MEAN

3.98	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.