IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
426	 36.86	0	434906..438445	+	1179	71903093	smc	M28_Spy0427	-	chromosome partition protein smc
427	 32.30	-1	438698..439570	-	290	71903094	-	M28_Spy0428	-	transcriptional regulator
428	 27.72	-2	439769..440695	+	308	71903095	aroE.2	M28_Spy0429	-	shikimate 5-dehydrogenase
429	 26.16	-2	440692..441528	+	278	71903096	-	M28_Spy0430	-	putative cytoplasmic protein
430	 33.60	-1	441506..442264	+	252	71903097	-	M28_Spy0431	-	hypothetical protein
431	 30.80	-1	442257..443243	+	328	71903098	-	M28_Spy0432	-	hypothetical protein
432	 29.58	-2	443253..444452	+	399	71903099	metK1	M28_Spy0433	-	S-adenosylmethionine synthetase
433	 29.51	-2	444436..445404	+	322	71903100	-	M28_Spy0434	-	hypothetical protein
434	 28.48	-2	445459..446448	+	329	71903101	-	M28_Spy0435	-	glycosyltransferase
435	 26.22	-2	446851..447117	+	88	71903102	-	M28_Spy0436	-	hypothetical protein
436	 30.40	-1	447141..448298	+	385	71903103	-	M28_Spy0437	-	UDP-glucose 6-dehydrogenase
437	 30.44	-1	448415..449590	+	391	71903104	mefE	M28_Spy0438	-	macrolide-efflux protein
438	 30.95	-1	449693..449902	-	69	71903105	-	M28_Spy0439	-	transcriptional regulator
439	 36.47	0	449892..451550	-	552	71903106	-	M28_Spy0440	-	chromosome segregation ATPase
440	 33.33	-1	451541..451765	-	74	71903107	-	M28_Spy0441	-	hypothetical protein
441	 37.36	0	451765..452658	-	297	71903108	-	M28_Spy0442	-	hypothetical protein
442	 48.02	+2	452674..452850	+	58	71903109	-	M28_Spy0443	-	putative cytoplasmic protein
443	 37.27	0	452878..453207	+	109	71903110	-	M28_Spy0444	-	RelB-domain-containing protein
444	 39.22	0	453207..453512	+	101	71903111	-	M28_Spy0445	-	ParE-domain-containing protein
445	 38.99	0	453645..453803	+	52	71903112	-	M28_Spy0446	-	putative cytoplasmic protein
446	 27.78	-2	453908..454681	+	257	71903113	-	M28_Spy0447	-	hypothetical protein
447	 33.33	-1	455123..455854	-	243	71903114	-	M28_Spy0448	-	transposase
448	 36.76	0	455974..456294	-	106	71903115	-	M28_Spy0449	-	transposase
449	 34.48	0	456376..456549	-	57	71903116	-	M28_Spy0450	-	hypothetical protein
450	 39.97	0	456553..457350	+	265	71903117	-	M28_Spy0451	-	HAD superfamily hydrolase
451	 43.03	+1	457354..458178	+	274	71903118	-	M28_Spy0452	-	HAD superfamily hydrolase
452	 43.39	+1	458178..459728	+	516	71903119	ftsY	M28_Spy0453	-	cell division protein
453	 38.89	0	459782..461149	-	455	71903120	-	M28_Spy0454	-	multidrug resistance protein B
454	 35.82	0	461477..462319	+	280	71903121	licT	M28_Spy0455	-	BigG family transcription antiterminator
455	 43.37	+1	462321..464183	+	620	71903122	-	M28_Spy0456	-	PTS system, beta-glucoside-specific IIABC component
456	 41.54	0	464202..465626	+	474	71903123	bglA	M28_Spy0457	-	6-phospho-beta-glucosidase
457	 41.07	0	465725..466564	-	279	71903124	-	M28_Spy0458	-	hypothetical protein
458	 40.20	0	466540..467442	-	300	71903125	-	M28_Spy0459	-	hypothetical protein
459	 34.85	0	467576..467773	+	65	71903126	-	M28_Spy0460	-	hypothetical protein
460	 24.81	-2	467871..467999	-	42	71903128	-	M28_Spy0462	-	hypothetical protein
461	 42.99	+1	467979..470111	+	710	71903127	-	M28_Spy0461	-	transcription accessory protein
462	 42.03	0	470053..470535	+	160	71903129	-	M28_Spy0463	-	hypothetical protein
463	 42.12	0	470599..470871	+	90	71903130	-	M28_Spy0464	-	stress-responsive transcriptional regulator PspC
464	 39.48	0	471176..472168	+	330	162139410	ptsK	M28_Spy0465	-	HPr kinase/phosphorylase
465	 36.79	0	472165..472944	+	259	71903132	lgt	M28_Spy0466	-	prolipoprotein diacylglyceryl transferase
466	 32.84	-1	472966..473373	+	135	71903133	-	M28_Spy0467	-	hypothetical protein
467	 35.78	0	473345..473794	+	149	71903134	-	M28_Spy0468	-	hypothetical protein
468	 36.84	0	473954..474238	-	94	71903135	-	M28_Spy0469	-	hypothetical protein
469	 39.48	0	474437..475363	+	308	71903136	-	M28_Spy0470	-	U32 family peptidase
470	 44.68	+1	475465..476751	+	428	71903137	-	M28_Spy0471	-	U32 family peptidase
471	 39.44	0	476968..477180	+	70	71903138	-	M28_Spy0472	-	putative cytoplasmic protein
472	 38.30	0	477277..477417	-	46	71903139	-	M28_Spy0473	-	hypothetical protein
473	 42.10	0	477553..479058	-	501	71903140	lysS	M28_Spy0474	-	lysyl-tRNA synthetase
474	 39.31	0	479220..480122	+	300	71903141	-	M28_Spy0475	-	HAD superfamily hydrolase
475	 39.58	0	480230..480853	-	207	71903142	-	M28_Spy0476	-	phosphoglycerate mutase
476	 37.29	0	481194..481673	-	159	71903143	-	M28_Spy0477	-	transcriptional regulator
477	 39.90	0	481763..482371	-	202	71903144	-	M28_Spy0478	-	thiamine transporter
478	 36.28	0	482595..483443	-	282	71903145	-	M28_Spy0479	-	N-acetylmuramoyl-L-alanine amidase
479	 40.67	0	483768..484271	+	167	71903146	-	M28_Spy0480	-	integral membrane protein
480	 36.98	0	484255..484638	+	127	71903147	-	M28_Spy0481	-	hypothetical protein
481	 39.35	0	484685..485083	-	132	71903148	-	M28_Spy0482	-	glutathione peroxidase
482	 41.65	0	485156..487030	-	624	71903149	pepF	M28_Spy0483	-	oligoendopeptidase F
483	 39.09	0	487099..489912	+	937	71903150	ppc	M28_Spy0484	-	phosphoenolpyruvate carboxylase
484	 36.63	0	490052..491356	+	434	71903151	ftsW	M28_Spy0485	-	cell division protein
485	 37.59	0	491373..491513	-	46	71903152	-	M28_Spy0486	-	putative cytoplasmic protein
486	 43.86	+1	491710..492906	+	398	162139409	tuf	M28_Spy0487	-	elongation factor Tu
487	 42.29	+1	493147..493905	+	252	71903154	tpiA	M28_Spy0488	-	triosephosphate isomerase
488	 36.33	0	494004..495239	-	411	71903155	-	M28_Spy0489	-	methicillin resistance expression factor
489	 39.29	0	495226..496467	-	413	71903156	murM	M28_Spy0490	-	UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase
490	 40.99	0	496452..497261	-	269	71903157	-	M28_Spy0491	-	HAD superfamily hydrolase
491	 39.74	0	497412..497645	-	77	71903158	-	M28_Spy0492	-	putative cytoplasmic protein
492	 41.09	0	497717..499018	-	433	71903159	-	M28_Spy0493	-	dGTP triphosphohydrolase
493	 39.02	0	499100..499486	+	128	71903160	-	M28_Spy0494	-	putative cytoplasmic protein
494	 42.21	0	499716..502397	+	893	71903161	pacL	M28_Spy0495	-	calcium-transporting ATPase
495	 36.05	0	502481..503512	-	343	71903162	regR	M28_Spy0496	-	LacI family transcription regulator
496	 40.71	0	503540..505465	-	641	71903163	-	M28_Spy0497	-	oligohyaluronate lyase
497	 38.89	0	505533..506414	-	293	71903164	agaD	M28_Spy0498	-	PTS system, N-acetylgalactosamine-specific IID component
498	 43.55	+1	506341..507123	-	260	71903165	-	M28_Spy0499	-	PTS system, N-acetylgalactosamine-specific IIC component
499	 41.31	0	507142..507630	-	162	71903166	agaV	M28_Spy0500	-	PTS system, N-acetylgalactosamine-specific IIB component
500	 43.17	+1	507666..508865	-	399	71903167	-	M28_Spy0501	-	unsaturated glucuronyl hydrolase
501	 42.24	0	508865..509302	-	145	71903168	-	M28_Spy0502	-	PTS system, N-acetylgalactosamine-specific IIA component
502	 41.51	0	509637..510431	+	264	71903169	idnO	M28_Spy0503	-	gluconate 5-dehydrogenase
503	 41.74	0	510456..511097	+	213	71903170	-	M28_Spy0504	-	hypothetical protein
504	 43.80	+1	511087..512127	+	346	71903171	-	M28_Spy0505	-	2-dehydro-3-deoxygluconokinase
505	 41.59	0	512114..512767	+	217	71903172	kgdA	M28_Spy0506	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
506	 36.99	0	513057..513713	+	218	71903173	-	M28_Spy0507	-	beta-phosphoglucomutase
507	 36.73	0	514358..515533	+	391	71903174	-	M28_Spy0508	-	iron-sulfur cluster-binding protein
508	 39.55	0	515687..516700	+	337	71903175	prfB	M28_Spy0509	-	peptide chain release factor 2
509	 40.69	0	516719..517411	+	230	71903176	ftsE	M28_Spy0510	-	cell division ATP-binding protein
510	 35.83	0	517374..518333	+	319	71903177	ftsX	M28_Spy0511	-	cell division protein
511	 36.91	0	518643..519341	-	232	71903178	-	M28_Spy0512	-	hydroxyacylglutathione hydrolase
512	 39.27	0	519482..520273	+	263	71903179	-	M28_Spy0513	-	acetoin reductase
513	 38.01	0	520381..522882	+	833	71903180	dinG	M28_Spy0514	-	bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
514	 42.21	0	523217..524410	+	397	71903181	aspC	M28_Spy0515	-	aspartate aminotransferase
515	 38.01	0	524440..525786	+	448	71903182	asnC	M28_Spy0516	-	asparaginyl-tRNA synthetase
516	 41.64	0	526201..527091	+	296	71903183	-	M28_Spy0517	-	hypothetical protein
517	 41.92	0	527088..528065	+	325	71903184	-	M28_Spy0518	-	transporter
518	 39.69	0	528062..528973	+	303	71903185	-	M28_Spy0519	-	putative cytoplasmic protein
519	 42.85	+1	529106..530503	+	465	71903186	pepD	M28_Spy0520	-	dipeptidase
520	 38.63	0	530655..532202	+	515	71903187	-	M28_Spy0521	-	high-affinity zinc uptake system protein ZnuA precursor
521	 37.70	0	532341..533072	+	243	71903188	-	M28_Spy0522	-	GntR family transcriptional regulator
522	 42.42	+1	533092..534291	+	399	71903189	agaS	M28_Spy0523	-	galactosamine-6-phosphate deaminase (isomerizing)
523	 41.00	0	534388..534648	-	86	71903190	rpmE2	M28_Spy0524	-	50S ribosomal protein L31 type B
524	 41.51	0	534763..535704	-	313	71903191	-	M28_Spy0525	-	phosphoesterase, DHH family protein
525	 40.00	0	536098..536547	+	149	71903192	-	M28_Spy0526	-	flavodoxin
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.