IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
400	 37.55	0	408183..408419	+	78	71903067	secG	M28_Spy0401	-	preprotein translocase subunit SecG
401	 41.52	0	408513..410846	+	777	71903068	-	M28_Spy0402	-	exoribonuclease II
402	 40.60	0	410849..411316	+	155	71903069	smpB	M28_Spy0403	-	SsrA-binding protein
403	 37.08	0	411322..412041	+	239	71903070	-	M28_Spy0404	-	glutaminyl-peptide cyclotransferase
404	 42.90	+1	412158..412805	-	215	71903071	pcp	M28_Spy0405	-	pyrrolidone-carboxylate peptidase
405	 39.81	0	412855..413781	-	308	71903072	-	M28_Spy0406	-	permease
406	 38.19	0	413781..414521	-	246	71903073	-	M28_Spy0407	-	permease
407	 37.49	0	414675..415661	-	328	71903074	-	M28_Spy0408	-	glucosyltransferase
408	 38.10	0	415746..416123	-	125	71903075	gloA	M28_Spy0409	-	lactoylglutathione lyase
409	 40.99	0	416134..416799	-	221	71903076	-	M28_Spy0410	-	NAD(P)H-dependent quinone reductase
410	 41.80	0	416848..417933	-	361	71903077	pepQ	M28_Spy0411	-	Xaa-Pro dipeptidase
411	 39.92	0	418107..419108	+	333	71903078	ccpA	M28_Spy0412	-	catabolite control protein A
412	 38.74	0	419239..420237	+	332	71903079	-	M28_Spy0413	-	glycosyltransferase
413	 38.50	0	420239..421573	+	444	71903080	-	M28_Spy0414	-	1,2-diacylglycerol 3-glucosyltransferase
414	 42.95	+1	421995..423938	+	647	71903081	thrS	M28_Spy0415	-	threonyl-tRNA synthetase
415	 40.18	0	424079..425071	+	330	71903082	-	M28_Spy0416	-	putative ABC transporter
416	 38.56	0	425031..425891	+	286	71903083	-	M28_Spy0417	-	putative transmembrane protein
417	 39.82	0	425893..426678	+	261	71903084	-	M28_Spy0418	-	ABC transporter permease protein
418	 36.67	0	426764..426913	+	49	71903085	-	M28_Spy0419	-	dihydroxyacetone kinase
419	 44.30	+1	427308..428456	+	382	71903086	-	M28_Spy0420	-	acetyl-CoA acetyltransferase
420	 37.34	0	428413..429660	+	415	71903087	-	M28_Spy0421	-	long-chain-fatty-acid--CoA ligase
421	 38.07	0	429716..430750	+	344	71903088	-	M28_Spy0422	-	putative cytoplasmic protein
422	 39.38	0	430912..431622	+	236	71903089	vicR	M28_Spy0423	-	two-component response regulator
423	 37.62	0	431615..432967	+	450	71903090	vicK	M28_Spy0424	-	two-component sensor histidine kinase
424	 37.53	0	432971..433780	+	269	71903091	vicX	M28_Spy0425	-	zinc-dependent hydrolase
425	 37.66	0	434213..434905	+	230	71903092	rnc	M28_Spy0426	-	ribonuclease III
426	 36.86	0	434906..438445	+	1179	71903093	smc	M28_Spy0427	-	chromosome partition protein smc
427	 32.30	-1	438698..439570	-	290	71903094	-	M28_Spy0428	-	transcriptional regulator
428	 27.72	-2	439769..440695	+	308	71903095	aroE.2	M28_Spy0429	-	shikimate 5-dehydrogenase
429	 26.16	-2	440692..441528	+	278	71903096	-	M28_Spy0430	-	putative cytoplasmic protein
430	 33.60	-1	441506..442264	+	252	71903097	-	M28_Spy0431	-	hypothetical protein
431	 30.80	-1	442257..443243	+	328	71903098	-	M28_Spy0432	-	hypothetical protein
432	 29.58	-2	443253..444452	+	399	71903099	metK1	M28_Spy0433	-	S-adenosylmethionine synthetase
433	 29.51	-2	444436..445404	+	322	71903100	-	M28_Spy0434	-	hypothetical protein
434	 28.48	-2	445459..446448	+	329	71903101	-	M28_Spy0435	-	glycosyltransferase
435	 26.22	-2	446851..447117	+	88	71903102	-	M28_Spy0436	-	hypothetical protein
436	 30.40	-1	447141..448298	+	385	71903103	-	M28_Spy0437	-	UDP-glucose 6-dehydrogenase
437	 30.44	-1	448415..449590	+	391	71903104	mefE	M28_Spy0438	-	macrolide-efflux protein
438	 30.95	-1	449693..449902	-	69	71903105	-	M28_Spy0439	-	transcriptional regulator
439	 36.47	0	449892..451550	-	552	71903106	-	M28_Spy0440	-	chromosome segregation ATPase
440	 33.33	-1	451541..451765	-	74	71903107	-	M28_Spy0441	-	hypothetical protein
441	 37.36	0	451765..452658	-	297	71903108	-	M28_Spy0442	-	hypothetical protein
442	 48.02	+2	452674..452850	+	58	71903109	-	M28_Spy0443	-	putative cytoplasmic protein
443	 37.27	0	452878..453207	+	109	71903110	-	M28_Spy0444	-	RelB-domain-containing protein
444	 39.22	0	453207..453512	+	101	71903111	-	M28_Spy0445	-	ParE-domain-containing protein
445	 38.99	0	453645..453803	+	52	71903112	-	M28_Spy0446	-	putative cytoplasmic protein
446	 27.78	-2	453908..454681	+	257	71903113	-	M28_Spy0447	-	hypothetical protein
447	 33.33	-1	455123..455854	-	243	71903114	-	M28_Spy0448	-	transposase
448	 36.76	0	455974..456294	-	106	71903115	-	M28_Spy0449	-	transposase
449	 34.48	0	456376..456549	-	57	71903116	-	M28_Spy0450	-	hypothetical protein
450	 39.97	0	456553..457350	+	265	71903117	-	M28_Spy0451	-	HAD superfamily hydrolase
451	 43.03	+1	457354..458178	+	274	71903118	-	M28_Spy0452	-	HAD superfamily hydrolase
452	 43.39	+1	458178..459728	+	516	71903119	ftsY	M28_Spy0453	-	cell division protein
453	 38.89	0	459782..461149	-	455	71903120	-	M28_Spy0454	-	multidrug resistance protein B
454	 35.82	0	461477..462319	+	280	71903121	licT	M28_Spy0455	-	BigG family transcription antiterminator
455	 43.37	+1	462321..464183	+	620	71903122	-	M28_Spy0456	-	PTS system, beta-glucoside-specific IIABC component
456	 41.54	0	464202..465626	+	474	71903123	bglA	M28_Spy0457	-	6-phospho-beta-glucosidase
457	 41.07	0	465725..466564	-	279	71903124	-	M28_Spy0458	-	hypothetical protein
458	 40.20	0	466540..467442	-	300	71903125	-	M28_Spy0459	-	hypothetical protein
459	 34.85	0	467576..467773	+	65	71903126	-	M28_Spy0460	-	hypothetical protein
460	 24.81	-2	467871..467999	-	42	71903128	-	M28_Spy0462	-	hypothetical protein
461	 42.99	+1	467979..470111	+	710	71903127	-	M28_Spy0461	-	transcription accessory protein
462	 42.03	0	470053..470535	+	160	71903129	-	M28_Spy0463	-	hypothetical protein
463	 42.12	0	470599..470871	+	90	71903130	-	M28_Spy0464	-	stress-responsive transcriptional regulator PspC
464	 39.48	0	471176..472168	+	330	162139410	ptsK	M28_Spy0465	-	HPr kinase/phosphorylase
465	 36.79	0	472165..472944	+	259	71903132	lgt	M28_Spy0466	-	prolipoprotein diacylglyceryl transferase
466	 32.84	-1	472966..473373	+	135	71903133	-	M28_Spy0467	-	hypothetical protein
467	 35.78	0	473345..473794	+	149	71903134	-	M28_Spy0468	-	hypothetical protein
468	 36.84	0	473954..474238	-	94	71903135	-	M28_Spy0469	-	hypothetical protein
469	 39.48	0	474437..475363	+	308	71903136	-	M28_Spy0470	-	U32 family peptidase
470	 44.68	+1	475465..476751	+	428	71903137	-	M28_Spy0471	-	U32 family peptidase
471	 39.44	0	476968..477180	+	70	71903138	-	M28_Spy0472	-	putative cytoplasmic protein
472	 38.30	0	477277..477417	-	46	71903139	-	M28_Spy0473	-	hypothetical protein
473	 42.10	0	477553..479058	-	501	71903140	lysS	M28_Spy0474	-	lysyl-tRNA synthetase
474	 39.31	0	479220..480122	+	300	71903141	-	M28_Spy0475	-	HAD superfamily hydrolase
475	 39.58	0	480230..480853	-	207	71903142	-	M28_Spy0476	-	phosphoglycerate mutase
476	 37.29	0	481194..481673	-	159	71903143	-	M28_Spy0477	-	transcriptional regulator
477	 39.90	0	481763..482371	-	202	71903144	-	M28_Spy0478	-	thiamine transporter
478	 36.28	0	482595..483443	-	282	71903145	-	M28_Spy0479	-	N-acetylmuramoyl-L-alanine amidase
479	 40.67	0	483768..484271	+	167	71903146	-	M28_Spy0480	-	integral membrane protein
480	 36.98	0	484255..484638	+	127	71903147	-	M28_Spy0481	-	hypothetical protein
481	 39.35	0	484685..485083	-	132	71903148	-	M28_Spy0482	-	glutathione peroxidase
482	 41.65	0	485156..487030	-	624	71903149	pepF	M28_Spy0483	-	oligoendopeptidase F
483	 39.09	0	487099..489912	+	937	71903150	ppc	M28_Spy0484	-	phosphoenolpyruvate carboxylase
484	 36.63	0	490052..491356	+	434	71903151	ftsW	M28_Spy0485	-	cell division protein
485	 37.59	0	491373..491513	-	46	71903152	-	M28_Spy0486	-	putative cytoplasmic protein
486	 43.86	+1	491710..492906	+	398	162139409	tuf	M28_Spy0487	-	elongation factor Tu
487	 42.29	+1	493147..493905	+	252	71903154	tpiA	M28_Spy0488	-	triosephosphate isomerase
488	 36.33	0	494004..495239	-	411	71903155	-	M28_Spy0489	-	methicillin resistance expression factor
489	 39.29	0	495226..496467	-	413	71903156	murM	M28_Spy0490	-	UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase
490	 40.99	0	496452..497261	-	269	71903157	-	M28_Spy0491	-	HAD superfamily hydrolase
491	 39.74	0	497412..497645	-	77	71903158	-	M28_Spy0492	-	putative cytoplasmic protein
492	 41.09	0	497717..499018	-	433	71903159	-	M28_Spy0493	-	dGTP triphosphohydrolase
493	 39.02	0	499100..499486	+	128	71903160	-	M28_Spy0494	-	putative cytoplasmic protein
494	 42.21	0	499716..502397	+	893	71903161	pacL	M28_Spy0495	-	calcium-transporting ATPase
495	 36.05	0	502481..503512	-	343	71903162	regR	M28_Spy0496	-	LacI family transcription regulator
496	 40.71	0	503540..505465	-	641	71903163	-	M28_Spy0497	-	oligohyaluronate lyase
497	 38.89	0	505533..506414	-	293	71903164	agaD	M28_Spy0498	-	PTS system, N-acetylgalactosamine-specific IID component
498	 43.55	+1	506341..507123	-	260	71903165	-	M28_Spy0499	-	PTS system, N-acetylgalactosamine-specific IIC component
499	 41.31	0	507142..507630	-	162	71903166	agaV	M28_Spy0500	-	PTS system, N-acetylgalactosamine-specific IIB component
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.