IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
326	 42.11	0	342950..343861	-	303	71902993	exoA	M28_Spy0327	-	exodeoxyribonuclease III
327	 42.59	+1	344005..345192	+	395	71902994	lctO	M28_Spy0328	-	L-lactate oxidase
328	 41.74	0	345458..350395	+	1645	71902995	prtS	M28_Spy0329	-	lactocepin
329	 44.44	+1	350886..351065	+	59	71902996	-	M28_Spy0330	-	hypothetical protein
330	 40.11	0	351168..351875	+	235	71902997	-	M28_Spy0331	-	permease
331	 44.38	+1	352115..354115	+	666	71902998	metG	M28_Spy0332	-	methionyl-tRNA synthetase
332	 40.15	0	354478..354609	+	43	71902999	-	M28_Spy0333	-	hypothetical protein
333	 43.10	+1	354606..355619	+	337	71903000	nrdF	M28_Spy0334	-	ribonucleotide-diphosphate reductase subunit beta
334	 41.92	0	355623..356111	+	162	71903001	nrdI	M28_Spy0335	-	ribonucleotide reductase stimulatory protein
335	 45.53	+1	356078..358258	+	726	71903002	nrdE.1	M28_Spy0336	-	ribonucleotide-diphosphate reductase subunit alpha
336	 51.43	+2	358463..359230	-	255	71903003	spyA	M28_Spy0337	-	C3 family ADP-ribosyltransferase
337	 39.49	0	359654..360124	+	156	71903004	-	M28_Spy0338	-	hypothetical protein
338	 38.21	0	360431..360676	-	81	71903005	-	M28_Spy0339	-	transposase
339	 42.05	0	360965..361423	-	152	71903006	-	M28_Spy0340	-	transposase
340	 41.18	0	362103..362612	+	169	71903007	-	M28_Spy0341	-	hypothetical protein
341	 45.33	+1	362817..363116	+	99	71903008	-	M28_Spy0342	-	hypothetical protein
342	 37.52	0	363489..363989	-	166	71903009	-	M28_Spy0343	-	hypothetical protein
343	 39.68	0	364066..364191	+	41	71903010	-	M28_Spy0344	-	hypothetical protein
344	 26.90	-2	364257..364955	-	232	71903011	speJ	M28_Spy0345	-	exotoxin type J precursor
345	 39.52	0	365982..366563	+	193	71903012	-	M28_Spy0346	-	hypothetical protein
346	 39.01	0	367178..367459	+	93	71903013	-	M28_Spy0347	-	hypothetical protein
347	 43.92	+1	367452..368150	+	232	71903014	fabG	M28_Spy0348	-	3-ketoacyl-(acyl-carrier-protein) reductase
348	 41.39	0	368193..369185	+	330	71903015	-	M28_Spy0349	-	NAD-dependent oxidoreductase
349	 42.41	+1	369512..370855	+	447	71903016	-	M28_Spy0350	-	phosphoglycerate transporter protein
350	 42.88	+1	371028..372410	+	460	71903017	gcaD	M28_Spy0351	-	UDP-N-acetylglucosamine pyrophosphorylase
351	 40.90	0	372441..372995	+	184	71903018	-	M28_Spy0352	-	phosphohydrolase
352	 37.25	0	372992..373246	+	84	71903019	-	M28_Spy0353	-	hypothetical protein
353	 42.24	0	373266..373961	+	231	71903020	pfs	M28_Spy0354	-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
354	 35.96	0	374112..374453	+	113	71903021	-	M28_Spy0355	-	hypothetical protein
355	 41.05	0	374552..375199	-	215	71903022	scaR	M28_Spy0356	-	iron-dependent repressor
356	 35.79	0	375341..376276	+	311	71903023	mtsA	M28_Spy0357	-	manganese-binding protein
357	 36.52	0	376313..377065	+	250	71903024	mtsB	M28_Spy0358	-	manganese transport system ATP-binding protein
358	 36.84	0	377066..377920	+	284	71903025	mtsC	M28_Spy0359	-	manganese transport system membrane protein
359	 39.41	0	378067..378873	-	268	71903026	-	M28_Spy0360	-	peptidyl-prolyl cis-trans isomerase
360	 41.27	0	379090..381495	+	801	71903027	ftsK	M28_Spy0361	-	cell division protein
361	 34.46	0	381565..381918	-	117	71903028	-	M28_Spy0362	-	integral membrane protein
362	 41.55	0	382162..382587	+	141	162139411	rplK	M28_Spy0363	-	50S ribosomal protein L11
363	 42.03	0	382693..383382	+	229	71903030	rplA	M28_Spy0364	-	50S ribosomal protein L1
364	 42.52	+1	383704..384432	+	242	71903031	pyrH	M28_Spy0365	-	uridylate kinase
365	 39.96	0	384461..385018	+	185	71903032	frr	M28_Spy0366	-	ribosome recycling factor
366	 41.38	0	385127..385984	+	285	71903033	-	M28_Spy0367	-	S1 RNA-binding domain-containing protein
367	 42.35	+1	386057..386566	+	169	71903034	msrA.2	M28_Spy0368	-	methionine sulfoxide reductase A
368	 36.43	0	386557..386814	+	85	71903035	-	M28_Spy0369	-	hypothetical protein
369	 44.59	+1	386934..388115	+	393	71903036	-	M28_Spy0370	-	surface antigen
370	 40.80	0	388355..390202	+	615	71903037	-	M28_Spy0371	-	67 kDa myosin-crossreactive streptococcal antigen
371	 42.07	0	390361..391413	+	350	71903038	phoH	M28_Spy0372	-	hypothetical protein
372	 42.19	0	391459..392034	+	191	71903039	-	M28_Spy0373	-	uracil DNA glycosylase superfamily protein
373	 39.71	0	392142..392690	+	182	71903040	-	M28_Spy0374	-	putative metalloprotease
374	 36.76	0	392671..393078	+	135	71903041	dgk	M28_Spy0375	-	diacylglycerol kinase
375	 40.13	0	393198..394094	+	298	71903042	era	M28_Spy0376	-	GTP-binding protein Era
376	 40.42	0	394069..394590	+	173	71903043	-	M28_Spy0377	-	phosphohydrolase
377	 28.24	-2	394896..395150	-	84	71903044	-	M28_Spy0378	-	hypothetical protein
378	 38.03	0	395548..395781	+	77	71903045	-	M28_Spy0379	-	hypothetical protein
379	 39.89	0	395796..395978	+	60	71903046	-	M28_Spy0380	-	hypothetical protein
380	 35.58	0	396169..396435	-	88	71903047	-	M28_Spy0381	-	transposase
381	 37.63	0	396348..396929	-	193	71903048	-	M28_Spy0382	-	transposase
382	 41.35	0	397089..397400	+	103	71903049	-	M28_Spy0383	-	bacteriocin
383	 39.80	0	397413..397613	+	66	71903050	-	M28_Spy0384	-	hypothetical protein
384	 48.84	+2	397974..398102	+	42	71903051	silD	M28_Spy0385	-	hypothetical protein
385	 30.30	-1	398152..398448	+	98	71903052	-	M28_Spy0386	-	hypothetical protein
386	 26.87	-2	398627..399028	+	133	71903053	-	M28_Spy0387	-	hypothetical protein
387	 35.90	0	399067..399183	-	38	71903054	-	M28_Spy0388	-	putative cytoplasmic protein
388	 42.30	+1	399279..400349	+	356	71903055	-	M28_Spy0389	-	hypothetical protein
389	 40.85	0	400446..400844	+	132	71903056	-	M28_Spy0390	-	hypothetical protein
390	 37.41	0	401192..401461	-	89	71903057	-	M28_Spy0391	-	hypothetical protein
391	 38.89	0	401662..401769	+	35	71903058	-	M28_Spy0392	-	hypothetical protein
392	 39.32	0	401772..401888	+	38	71903059	-	M28_Spy0393	-	hypothetical protein
393	 39.09	0	401983..402225	-	80	71903060	-	M28_Spy0394	-	hypothetical protein
394	 36.85	0	402517..403398	+	293	71903061	mutR	M28_Spy0395	-	transcriptional regulator
395	 43.00	+1	403570..404397	+	275	71903062	fpg	M28_Spy0396	-	formamidopyrimidine-DNA glycosylase
396	 42.14	0	404307..404987	+	226	71903063	coaE	M28_Spy0397	-	dephospho-CoA kinase
397	 43.58	+1	405177..406679	+	500	71903064	-	M28_Spy0398	-	ATPase
398	 38.86	0	406801..407994	+	397	71903065	-	M28_Spy0399	-	multidrug resistance protein B
399	 35.37	0	407991..408137	+	48	71903066	rpmG	M28_Spy0400	-	50S ribosomal protein L33
400	 37.55	0	408183..408419	+	78	71903067	secG	M28_Spy0401	-	preprotein translocase subunit SecG
401	 41.52	0	408513..410846	+	777	71903068	-	M28_Spy0402	-	exoribonuclease II
402	 40.60	0	410849..411316	+	155	71903069	smpB	M28_Spy0403	-	SsrA-binding protein
403	 37.08	0	411322..412041	+	239	71903070	-	M28_Spy0404	-	glutaminyl-peptide cyclotransferase
404	 42.90	+1	412158..412805	-	215	71903071	pcp	M28_Spy0405	-	pyrrolidone-carboxylate peptidase
405	 39.81	0	412855..413781	-	308	71903072	-	M28_Spy0406	-	permease
406	 38.19	0	413781..414521	-	246	71903073	-	M28_Spy0407	-	permease
407	 37.49	0	414675..415661	-	328	71903074	-	M28_Spy0408	-	glucosyltransferase
408	 38.10	0	415746..416123	-	125	71903075	gloA	M28_Spy0409	-	lactoylglutathione lyase
409	 40.99	0	416134..416799	-	221	71903076	-	M28_Spy0410	-	NAD(P)H-dependent quinone reductase
410	 41.80	0	416848..417933	-	361	71903077	pepQ	M28_Spy0411	-	Xaa-Pro dipeptidase
411	 39.92	0	418107..419108	+	333	71903078	ccpA	M28_Spy0412	-	catabolite control protein A
412	 38.74	0	419239..420237	+	332	71903079	-	M28_Spy0413	-	glycosyltransferase
413	 38.50	0	420239..421573	+	444	71903080	-	M28_Spy0414	-	1,2-diacylglycerol 3-glucosyltransferase
414	 42.95	+1	421995..423938	+	647	71903081	thrS	M28_Spy0415	-	threonyl-tRNA synthetase
415	 40.18	0	424079..425071	+	330	71903082	-	M28_Spy0416	-	putative ABC transporter
416	 38.56	0	425031..425891	+	286	71903083	-	M28_Spy0417	-	putative transmembrane protein
417	 39.82	0	425893..426678	+	261	71903084	-	M28_Spy0418	-	ABC transporter permease protein
418	 36.67	0	426764..426913	+	49	71903085	-	M28_Spy0419	-	dihydroxyacetone kinase
419	 44.30	+1	427308..428456	+	382	71903086	-	M28_Spy0420	-	acetyl-CoA acetyltransferase
420	 37.34	0	428413..429660	+	415	71903087	-	M28_Spy0421	-	long-chain-fatty-acid--CoA ligase
421	 38.07	0	429716..430750	+	344	71903088	-	M28_Spy0422	-	putative cytoplasmic protein
422	 39.38	0	430912..431622	+	236	71903089	vicR	M28_Spy0423	-	two-component response regulator
423	 37.62	0	431615..432967	+	450	71903090	vicK	M28_Spy0424	-	two-component sensor histidine kinase
424	 37.53	0	432971..433780	+	269	71903091	vicX	M28_Spy0425	-	zinc-dependent hydrolase
425	 37.66	0	434213..434905	+	230	71903092	rnc	M28_Spy0426	-	ribonuclease III
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.