IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
263	 39.25	0	284416..285480	+	354	71902930	-	M28_Spy0264	-	ABC transporter ATP-binding protein
264	 36.94	0	285481..286173	+	230	71902931	-	M28_Spy0265	-	ABC transporter permease protein
265	 36.98	0	286227..287597	-	456	71902932	braB	M28_Spy0266	-	branched-chain amino acid transport system carrier protein
266	 37.78	0	287831..289045	+	404	71902933	-	M28_Spy0267	-	serine/threonine transporter SstT
267	 37.78	0	289100..289774	-	224	71902934	-	M28_Spy0268	-	potassium uptake protein KtrA
268	 38.22	0	289784..291175	-	463	71902935	-	M28_Spy0269	-	potassium uptake protein KtrB
269	 38.10	0	291245..291958	-	237	71902936	gidB	M28_Spy0270	-	glucose-inhibited division protein B
270	 36.20	0	292108..292665	+	185	71902937	lemA	M28_Spy0271	-	hypothetical protein
271	 40.47	0	292712..293608	+	298	71902938	-	M28_Spy0272	-	heat shock protein HtpX
272	 37.24	0	293839..294375	+	178	71902939	-	M28_Spy0273	-	putative cytoplasmic protein
273	 38.57	0	294642..295328	+	228	71902940	covR	M28_Spy0274	-	response regulator
274	 35.46	0	295334..296836	+	500	71902941	covS	M28_Spy0275	-	CsrS
275	 38.79	0	297051..297545	+	164	71902942	-	M28_Spy0276	-	transcriptional regulator NrdR
276	 37.16	0	297529..298704	+	391	71902943	dnaB	M28_Spy0277	-	replicative DNA helicase
277	 41.31	0	298705..299607	+	300	71902944	dnaI	M28_Spy0278	-	primosomal protein DnaI
278	 43.02	+1	299670..300980	+	436	71902945	engA	M28_Spy0279	-	GTP-binding protein EngA
279	 36.33	0	301187..304285	+	1032	71902946	snf	M28_Spy0280	-	phage-related DNA helicase
280	 36.32	0	304528..305130	+	200	71902947	-	M28_Spy0281	-	putative cytoplasmic protein
281	 37.40	0	305170..306498	+	442	71902948	murC	M28_Spy0282	-	UDP-N-acetylmuramate--L-alanine ligase
282	 39.13	0	306544..307026	+	160	71902949	-	M28_Spy0283	-	acetyltransferase
283	 36.76	0	307138..308712	+	524	71902950	-	M28_Spy0284	-	aminodeoxychorismate lyase
284	 36.72	0	308737..309267	+	176	71902951	greA	M28_Spy0285	-	transcription elongation factor GreA
285	 39.83	0	309887..310810	-	307	71902952	-	M28_Spy0286	-	OxaA-like protein precursor
286	 38.46	0	310892..311203	-	103	71902953	-	M28_Spy0287	-	acylphosphatase
287	 42.01	0	311431..312168	+	245	71902954	-	M28_Spy0288	-	23S rRNA methyltransferase
288	 39.32	0	312207..312707	+	166	71902955	-	M28_Spy0289	-	HAD superfamily hydrolase
289	 36.38	0	312722..313411	+	229	71902956	-	M28_Spy0290	-	integral membrane protein
290	 36.63	0	313589..313831	+	80	71902957	-	M28_Spy0291	-	hypothetical protein
291	 40.13	0	314009..314803	+	264	71902958	glr	M28_Spy0292	-	glutamate racemase
292	 42.25	+1	314800..315786	+	328	162139413	-	M28_Spy0293	-	fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein
293	 39.27	0	315765..316286	+	173	71902960	-	M28_Spy0294	-	putative phosphoesterase
294	 34.63	0	316283..316744	+	153	71902961	-	M28_Spy0295	-	CBS domain-containing protein
295	 33.20	-1	316741..317487	+	248	71902962	xerD	M28_Spy0296	-	site-specific tyrosine recombinase XerD-like protein
296	 35.32	0	317487..318191	+	234	71902963	scpA	M28_Spy0297	-	segregation and condensation protein A
297	 38.41	0	318188..318739	+	183	71902964	scpB	M28_Spy0298	-	segregation and condensation protein B
298	 39.09	0	318837..319583	+	248	71902965	-	M28_Spy0299	-	ribosomal large subunit pseudouridine synthase B
299	 35.61	0	319580..319843	+	87	71902966	-	M28_Spy0300	-	hypothetical protein
300	 36.75	0	319985..320569	+	194	71902967	-	M28_Spy0301	-	23S rRNA methyltransferase
301	 31.56	-1	320881..321444	+	187	71902968	-	M28_Spy0302	-	riboflavin transporter
302	 34.56	0	321446..322099	+	217	71902969	-	M28_Spy0303	-	phosphatidylglycerophosphatase B-like protein
303	 38.55	0	322374..323312	+	312	71902970	-	M28_Spy0304	-	Fe-S oxidoreductase
304	 40.55	0	323324..323905	+	193	71902971	-	M28_Spy0305	-	SAM-dependent methyltransferase
305	 38.21	0	323999..325372	+	457	71902972	hlyX	M28_Spy0306	-	putative hemolysin
306	 37.27	0	325378..326241	+	287	71902973	pflC	M28_Spy0307	-	pyruvate formate-lyase activating enzyme
307	 40.45	0	326366..327307	+	313	71902974	ppaC	M28_Spy0308	-	putative manganese-dependent inorganic pyrophosphatase
308	 39.47	0	327353..328036	+	227	71902975	-	M28_Spy0309	-	putative cytoplasmic protein
309	 39.21	0	328081..329118	-	345	71902976	fhuG	M28_Spy0310	-	ferrichrome transport system permease protein
310	 42.26	+1	329079..330131	-	350	71902977	fhuB	M28_Spy0311	-	ferrichrome transport system permease protein
311	 37.73	0	330121..331053	-	310	71902978	fhuD	M28_Spy0312	-	ferrichrome-binding protein
312	 39.34	0	331079..331861	-	260	71902979	fhuA	M28_Spy0313	-	ferrichrome transport ATP-binding protein
313	 41.63	0	332107..333552	-	481	71902980	murE	M28_Spy0314	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
314	 40.24	0	333640..335274	+	544	71902981	-	M28_Spy0315	-	polysaccharides and teichoic acids export protein
315	 40.16	0	335442..336071	+	209	71902982	upp	M28_Spy0316	-	uracil phosphoribosyltransferase
316	 41.79	0	336295..336885	+	196	71902983	clpP	M28_Spy0317	-	ATP-dependent Clp protease proteolytic subunit
317	 33.33	-1	337380..337655	+	91	71902984	-	M28_Spy0318	-	hypothetical protein
318	 41.67	0	337904..338539	+	211	162139412	tdk	M28_Spy0319	-	thymidylate kinase
319	 39.50	0	338557..339432	+	291	71902986	dnaX	M28_Spy0320	-	DNA polymerase III subunit delta'
320	 39.51	0	339619..339780	+	53	71902987	-	M28_Spy0321	-	signal peptidase-like protein
321	 33.33	-1	339935..340258	+	107	71902988	-	M28_Spy0322	-	DNA replication intiation control protein YabA
322	 42.48	+1	340263..341126	+	287	71902989	-	M28_Spy0323	-	corrin/porphyrin methyltransferase
323	 36.39	0	341153..341545	+	130	71902990	-	M28_Spy0324	-	hypothetical protein
324	 46.35	+2	341592..342221	-	209	71902991	cutC	M28_Spy0325	-	copper homeostasis protein
325	 39.78	0	342520..342876	+	118	71902992	-	M28_Spy0326	-	arsenate reductase family protein
326	 42.11	0	342950..343861	-	303	71902993	exoA	M28_Spy0327	-	exodeoxyribonuclease III
327	 42.59	+1	344005..345192	+	395	71902994	lctO	M28_Spy0328	-	L-lactate oxidase
328	 41.74	0	345458..350395	+	1645	71902995	prtS	M28_Spy0329	-	lactocepin
329	 44.44	+1	350886..351065	+	59	71902996	-	M28_Spy0330	-	hypothetical protein
330	 40.11	0	351168..351875	+	235	71902997	-	M28_Spy0331	-	permease
331	 44.38	+1	352115..354115	+	666	71902998	metG	M28_Spy0332	-	methionyl-tRNA synthetase
332	 40.15	0	354478..354609	+	43	71902999	-	M28_Spy0333	-	hypothetical protein
333	 43.10	+1	354606..355619	+	337	71903000	nrdF	M28_Spy0334	-	ribonucleotide-diphosphate reductase subunit beta
334	 41.92	0	355623..356111	+	162	71903001	nrdI	M28_Spy0335	-	ribonucleotide reductase stimulatory protein
335	 45.53	+1	356078..358258	+	726	71903002	nrdE.1	M28_Spy0336	-	ribonucleotide-diphosphate reductase subunit alpha
336	 51.43	+2	358463..359230	-	255	71903003	spyA	M28_Spy0337	-	C3 family ADP-ribosyltransferase
337	 39.49	0	359654..360124	+	156	71903004	-	M28_Spy0338	-	hypothetical protein
338	 38.21	0	360431..360676	-	81	71903005	-	M28_Spy0339	-	transposase
339	 42.05	0	360965..361423	-	152	71903006	-	M28_Spy0340	-	transposase
340	 41.18	0	362103..362612	+	169	71903007	-	M28_Spy0341	-	hypothetical protein
341	 45.33	+1	362817..363116	+	99	71903008	-	M28_Spy0342	-	hypothetical protein
342	 37.52	0	363489..363989	-	166	71903009	-	M28_Spy0343	-	hypothetical protein
343	 39.68	0	364066..364191	+	41	71903010	-	M28_Spy0344	-	hypothetical protein
344	 26.90	-2	364257..364955	-	232	71903011	speJ	M28_Spy0345	-	exotoxin type J precursor
345	 39.52	0	365982..366563	+	193	71903012	-	M28_Spy0346	-	hypothetical protein
346	 39.01	0	367178..367459	+	93	71903013	-	M28_Spy0347	-	hypothetical protein
347	 43.92	+1	367452..368150	+	232	71903014	fabG	M28_Spy0348	-	3-ketoacyl-(acyl-carrier-protein) reductase
348	 41.39	0	368193..369185	+	330	71903015	-	M28_Spy0349	-	NAD-dependent oxidoreductase
349	 42.41	+1	369512..370855	+	447	71903016	-	M28_Spy0350	-	phosphoglycerate transporter protein
350	 42.88	+1	371028..372410	+	460	71903017	gcaD	M28_Spy0351	-	UDP-N-acetylglucosamine pyrophosphorylase
351	 40.90	0	372441..372995	+	184	71903018	-	M28_Spy0352	-	phosphohydrolase
352	 37.25	0	372992..373246	+	84	71903019	-	M28_Spy0353	-	hypothetical protein
353	 42.24	0	373266..373961	+	231	71903020	pfs	M28_Spy0354	-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
354	 35.96	0	374112..374453	+	113	71903021	-	M28_Spy0355	-	hypothetical protein
355	 41.05	0	374552..375199	-	215	71903022	scaR	M28_Spy0356	-	iron-dependent repressor
356	 35.79	0	375341..376276	+	311	71903023	mtsA	M28_Spy0357	-	manganese-binding protein
357	 36.52	0	376313..377065	+	250	71903024	mtsB	M28_Spy0358	-	manganese transport system ATP-binding protein
358	 36.84	0	377066..377920	+	284	71903025	mtsC	M28_Spy0359	-	manganese transport system membrane protein
359	 39.41	0	378067..378873	-	268	71903026	-	M28_Spy0360	-	peptidyl-prolyl cis-trans isomerase
360	 41.27	0	379090..381495	+	801	71903027	ftsK	M28_Spy0361	-	cell division protein
361	 34.46	0	381565..381918	-	117	71903028	-	M28_Spy0362	-	integral membrane protein
362	 41.55	0	382162..382587	+	141	162139411	rplK	M28_Spy0363	-	50S ribosomal protein L11
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.