IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
95	 38.18	0	110034..110198	-	54	71902762	-	M28_Spy0096	-	hypothetical protein
96	 37.76	0	110380..110673	+	97	71902763	-	M28_Spy0097	-	hypothetical protein
97	 34.59	0	110670..110987	+	105	71902764	trx.1	M28_Spy0098	-	thioredoxin
98	 42.42	+1	111005..111631	+	208	71902765	-	M28_Spy0099	-	tRNA-binding domain-containing protein
99	 38.89	0	111783..112178	+	131	71902766	ssb	M28_Spy0100	-	single-strand DNA-binding protein
100	 39.86	0	112439..113128	-	229	71902767	-	M28_Spy0101	-	deoxyadenosine kinase
101	 45.81	+1	113100..114149	-	349	71902768	-	M28_Spy0102	-	tRNA-dihydrouridine synthase
102	 42.15	0	114064..114936	-	290	71902769	hslO	M28_Spy0103	-	Hsp33-like chaperonin
103	 33.94	-1	115083..116576	-	497	71902770	rofA	M28_Spy0104	-	transcriptional regulator
104	 40.68	0	116807..118657	+	616	71902771	sfb1	M28_Spy0105	-	fibronectin binding protein 1
105	 38.28	0	118945..119793	+	282	71902772	-	M28_Spy0106	-	sortase
106	 35.74	0	120079..122322	+	747	71902773	cpa	M28_Spy0107	-	collagen-binding protein
107	 37.74	0	122315..122836	+	173	71902774	-	M28_Spy0108	-	signal peptidase I
108	 34.66	0	122843..123895	+	350	71902775	-	M28_Spy0109	-	hypothetical protein
109	 32.66	-1	123896..124636	+	246	71902776	eftLSL.B	M28_Spy0110	-	hypothetical protein
110	 36.67	0	124581..125240	+	219	71902777	-	M28_Spy0111	-	hypothetical protein
111	 34.08	-1	125399..126604	-	401	71902778	-	M28_Spy0112	-	AraC family transcriptional regulator
112	 38.83	0	126989..130483	+	1164	71902779	prtF2	M28_Spy0113	-	fibronectin binding protein
113	 35.14	0	130749..131246	-	165	71902780	-	M28_Spy0114	-	hypothetical protein
114	 39.58	0	131734..133173	+	479	71902781	atoE	M28_Spy0115	-	short-chain fatty acids transporter
115	 36.84	0	133243..134154	-	303	71902782	-	M28_Spy0116	-	LysR family transcriptional regulator
116	 42.19	0	134275..135459	+	394	71902783	-	M28_Spy0117	-	acetyl-CoA acetyltransferase
117	 39.47	0	135414..136130	+	238	71902784	atoD.2	M28_Spy0118	-	acetate CoA-transferase alpha subunit
118	 39.97	0	136133..136780	+	215	71902785	-	M28_Spy0119	-	acetyl-CoA:acetoacetyl-CoA transferase beta subunit
119	 35.39	0	136901..137581	-	226	71902786	-	M28_Spy0120	-	putative DNA-binding protein
120	 40.98	0	137755..138120	+	121	71902787	-	M28_Spy0121	-	translation initiation inhibitor
121	 40.29	0	138157..139176	+	339	71902788	sloR	M28_Spy0122	-	PfoR
122	 38.27	0	139627..139950	+	107	71902789	-	M28_Spy0123	-	hypothetical protein
123	 37.08	0	139940..141940	+	666	71902790	ntpI	M28_Spy0124	-	V-type ATP synthase subunit I
124	 40.83	0	141942..142421	+	159	162139414	ntpK	M28_Spy0125	-	V-type ATP synthase subunit K
125	 36.58	0	142489..143073	+	194	71902792	ntpE	M28_Spy0126	-	V-type sodium ATP synthase subunit E
126	 38.54	0	143089..144087	+	332	71902793	ntpC	M28_Spy0127	-	V-type ATP synthase subunit C
127	 38.94	0	144084..144404	+	106	71902794	ntpF	M28_Spy0128	-	V-type ATP synthase subunit F
128	 46.34	+2	144605..146380	+	591	71902795	ntpA	M28_Spy0129	-	V-type ATP synthase subunit A
129	 42.23	0	146381..147796	+	471	71902796	ntpB	M28_Spy0130	-	V-type ATP synthase subunit B
130	 37.96	0	147820..148467	+	215	71902797	ntpD	M28_Spy0131	-	V-type ATP synthase subunit D
131	 39.98	0	148587..149849	-	420	71902798	-	M28_Spy0132	-	toxic anion resistance protein
132	 38.23	0	149862..150740	-	292	71902799	-	M28_Spy0133	-	hypothetical protein
133	 43.62	+1	151178..152470	+	430	71902800	purA	M28_Spy0134	-	adenylosuccinate synthetase
134	 40.42	0	152797..153840	+	347	71902801	-	M28_Spy0135	-	nucleoside-binding protein
135	 41.08	0	153998..154552	+	184	71902802	nusG	M28_Spy0136	-	transcription antitermination protein NusG
136	 36.70	0	154914..156278	+	454	71902803	nga	M28_Spy0137	-	NAD glycohydrolase
137	 33.33	-1	156283..156768	+	161	71902804	-	M28_Spy0138	-	hypothetical protein
138	 37.51	0	156783..158507	+	574	71902805	slo	M28_Spy0139	-	streptolysin O
139	 41.60	0	158762..159148	+	128	71902806	-	M28_Spy0140	-	hypothetical protein
140	 38.97	0	159464..159676	-	70	71902807	-	M28_Spy0141	-	hypothetical protein
141	 41.67	0	160087..160254	-	55	71902808	-	M28_Spy0142	-	hypothetical protein
142	 44.67	+1	160429..160719	-	96	71902809	-	M28_Spy0143	-	hypothetical protein
143	 41.24	0	160951..162342	+	463	71902810	metB	M28_Spy0144	-	cystathionine beta-lyase
144	 46.64	+2	162554..165055	+	833	71902811	leuS	M28_Spy0145	-	leucyl-tRNA synthetase
145	 42.61	+1	165362..166795	+	477	71902812	ulaA	M28_Spy0146	-	ascorbate-specific PTS system enzyme IIC
146	 40.14	0	166866..167144	+	92	71902813	-	M28_Spy0147	-	PTS system, 3-keto-L-gulonate specific IIB component
147	 41.77	0	167267..167752	+	161	71902814	-	M28_Spy0148	-	PTS system, 3-keto-L-gulonate specific IIA component
148	 47.06	+2	167861..168523	+	220	71902815	ulaD	M28_Spy0149	-	3-keto-L-gulonate-6-phosphate decarboxylase
149	 42.05	0	168486..169391	+	301	71902816	-	M28_Spy0150	-	putative L-xylulose 5-phosphate 3-epimerase
150	 47.52	+2	169393..170097	+	234	71902817	araD	M28_Spy0151	-	L-ribulose-5-phosphate 4-epimerase
151	 40.14	0	170155..170301	+	48	71902818	-	M28_Spy0152	-	hypothetical protein
152	 36.98	0	170422..172068	+	548	71902819	-	M28_Spy0153	-	BigG family transcription antiterminator
153	 39.93	0	172321..173412	+	363	71902820	-	M28_Spy0154	-	putative L-ascorbate 6-phosphate lactonase
154	 42.27	+1	173899..175095	+	398	71902821	opuAA	M28_Spy0155	-	glycine betaine transport ATP-binding protein
155	 41.84	0	175111..176838	+	575	71902822	opuABC	M28_Spy0156	-	glycine betaine transport system permease protein
156	 42.41	+1	176969..179611	+	880	71902823	polA	M28_Spy0157	-	DNA polymerase I
157	 42.32	+1	179798..180253	+	151	71902824	-	M28_Spy0158	-	CoA binding protein
158	 39.53	0	180305..180772	+	155	71902825	perR	M28_Spy0159	-	ferric uptake regulation protein
159	 38.00	0	180929..181228	+	99	71902826	vlg	M28_Spy0160	-	Mry
160	 31.84	-1	181450..182784	+	444	71902827	-	M28_Spy0161	-	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
161	 33.15	-1	182777..183307	+	176	71902828	-	M28_Spy0162	-	ParB-like nuclease
162	 34.26	-1	183636..183851	-	71	71902829	-	M28_Spy0163	-	transposase
163	 41.52	0	183891..184061	-	56	71902830	-	M28_Spy0164	-	transposase
164	 37.71	0	184164..184460	-	98	71902831	-	M28_Spy0165	-	transposase
165	 37.76	0	184493..184786	-	97	71902832	-	M28_Spy0166	-	transposase
166	 43.40	+1	184864..186174	-	436	71902833	-	M28_Spy0167	-	putative malonate permease
167	 41.78	0	186371..187270	+	299	71902834	nadC	M28_Spy0168	-	nicotinate-nucleotide pyrophosphorylase
168	 40.27	0	187570..188376	-	268	71902835	-	M28_Spy0169	-	transposase
169	 36.33	0	188397..188930	-	177	71902836	-	M28_Spy0170	-	transposase
170	 35.65	0	188998..189861	-	287	71902837	-	M28_Spy0171	-	integral membrane protein
171	 34.95	0	189898..190083	+	61	71902838	-	M28_Spy0172	-	hypothetical protein
172	 42.96	+1	190080..191222	+	380	71902839	tgt	M28_Spy0173	-	queuine tRNA-ribosyltransferase
173	 42.31	+1	191439..191750	+	103	71902840	-	M28_Spy0174	-	zinc finger protein
174	 40.22	0	191754..192290	+	178	71902841	-	M28_Spy0175	-	hypothetical protein
175	 43.97	+1	192433..193212	+	259	71902842	-	M28_Spy0176	-	metal-dependent hydrolase
176	 45.00	+1	193188..193727	+	179	71902843	-	M28_Spy0177	-	tRNA-specific adenosine deaminase
177	 37.39	0	194341..195573	-	410	71902844	-	M28_Spy0178	-	transglutaminase/protease-like protein
178	 38.89	0	195615..195722	+	35	71902845	-	M28_Spy0179	-	putative cytoplasmic protein
179	 28.09	-2	195973..196677	+	234	71902846	speG	M28_Spy0180	-	exotoxin type G precursor
180	 35.83	0	196762..196881	+	39	71902847	-	M28_Spy0181	-	hypothetical protein
181	 26.67	-2	196917..197036	+	39	71902848	-	M28_Spy0182	-	putative cytoplasmic protein
182	 41.33	0	197133..198482	+	449	71902849	pgi	M28_Spy0183	-	glucose-6-phosphate isomerase
183	 35.06	0	198831..200339	-	502	71902850	-	M28_Spy0184	-	RofA-related transcriptional regulator
184	 36.11	0	200892..200999	+	35	71902851	-	M28_Spy0185	-	putative cytoplasmic protein
185	 37.95	0	201027..201698	+	223	71902852	-	M28_Spy0186	-	integral membrane protein
186	 38.52	0	201797..202702	-	301	71902853	hasC.2	M28_Spy0187	-	UTP-glucose-1-phosphate uridylyltransferase
187	 42.77	+1	202729..203745	-	338	71902854	gpsA	M28_Spy0188	-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
188	 34.44	0	204043..204492	+	149	71902855	-	M28_Spy0189	-	MarR family transcriptional regulator
189	 38.49	0	204485..206191	+	568	71902856	-	M28_Spy0190	-	ABC transporter ATP-binding and permease protein
190	 40.94	0	206191..207978	+	595	71902857	-	M28_Spy0191	-	ABC transporter ATP-binding and permease protein
191	 44.14	+1	208096..208863	+	255	71902858	-	M28_Spy0192	-	putative cytoplasmic protein
192	 42.95	+1	208973..209419	+	148	71902859	dut	M28_Spy0193	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
193	 44.64	+1	209500..210861	+	453	71902860	radA	M28_Spy0194	-	DNA repair protein RadA
194	 46.91	+2	211047..211547	+	166	71902861	-	M28_Spy0195	-	carbonic anhydrase
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.