IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 38.26   STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1232	 37.80	0	1243668..1244249	-	193	71903899	-	M28_Spy1237	-	phage protein
1233	 39.54	0	1244253..1244687	-	144	71903900	-	M28_Spy1238	-	phage protein
1234	 42.80	+1	1244726..1245211	-	161	71903901	-	M28_Spy1239	-	major tail shaft protein
1235	 36.34	0	1245211..1245609	-	132	71903902	-	M28_Spy1240	-	minor capsid protein
1236	 43.98	+1	1245606..1245962	-	118	71903903	-	M28_Spy1241	-	minor capsid protein
1237	 38.89	0	1245962..1246321	-	119	71903904	-	M28_Spy1242	-	minor capsid protein
1238	 39.09	0	1246284..1246700	-	138	71903905	-	M28_Spy1243	-	phage protein
1239	 43.83	+1	1246754..1247572	-	272	71903906	-	M28_Spy1244	-	major head protein
1240	 40.16	0	1247576..1248190	-	204	71903907	-	M28_Spy1245	-	phage protein
1241	 35.58	0	1248316..1248582	-	88	71903908	-	M28_Spy1246	-	phage protein
1242	 32.92	-1	1248644..1248883	-	79	71903909	-	M28_Spy1247	-	phage protein
1243	 40.09	0	1248855..1250333	-	492	71903910	-	M28_Spy1248	-	minor capsid protein
1244	 40.66	0	1250338..1251948	-	536	71903911	-	M28_Spy1249	-	minor capsid protein
1245	 41.09	0	1251854..1253065	-	403	71903912	-	M28_Spy1250	-	terminase large subunit
1246	 38.83	0	1253148..1253675	-	175	71903913	-	M28_Spy1251	-	phage protein
1247	 28.84	-2	1253672..1254049	-	125	71903914	-	M28_Spy1252	-	phage transcriptional regulator
1248	 28.52	-2	1254110..1254379	-	89	71903915	-	M28_Spy1253	-	phage protein
1249	 34.96	0	1254502..1255179	-	225	71903916	-	M28_Spy1254	-	ABC transporter ATP-binding protein
1250	 34.10	-1	1255158..1255676	-	172	71903917	-	M28_Spy1255	-	ParB-like protein
1251	 46.12	+1	1255757..1256014	+	85	71903918	-	M28_Spy1256	-	phage protein
1252	 46.85	+2	1256286..1256507	-	73	71903919	-	M28_Spy1257	-	phage protein
1253	 38.85	0	1256653..1257105	-	150	71903920	-	M28_Spy1258	-	phage protein
1254	 40.63	0	1257534..1258040	-	168	71903921	-	M28_Spy1259	-	phage protein
1255	 37.43	0	1258037..1258207	-	56	71903922	-	M28_Spy1260	-	phage protein
1256	 36.05	0	1258204..1258608	-	134	71903923	-	M28_Spy1261	-	phage protein
1257	 28.33	-2	1258618..1258917	-	99	71903924	-	M28_Spy1262	-	phage protein
1258	 41.75	0	1258884..1259168	-	94	71903925	-	M28_Spy1263	-	phage protein
1259	 35.71	0	1259162..1259413	-	83	71903926	-	M28_Spy1264	-	phage protein
1260	 37.25	0	1259410..1259766	-	118	71903927	-	M28_Spy1265	-	phage protein
1261	 38.78	0	1259763..1260203	-	146	71903928	-	M28_Spy1266	-	phage protein
1262	 44.12	+1	1260203..1260406	-	67	71903929	-	M28_Spy1267	-	phage protein
1263	 41.90	0	1260412..1260831	-	139	71903930	ssb2.1	M28_Spy1268	-	phage single-strand DNA binding protein
1264	 37.63	0	1260824..1261498	-	224	71903931	ssb1	M28_Spy1269	-	phage single-strand DNA binding protein
1265	 33.95	-1	1261499..1261981	-	160	71903932	-	M28_Spy1270	-	phage protein
1266	 39.49	0	1262003..1262278	-	91	71903933	-	M28_Spy1271	-	phage protein
1267	 42.55	+1	1262268..1262408	-	46	71903934	-	M28_Spy1272	-	phage protein
1268	 35.90	0	1262405..1262638	-	77	71903935	-	M28_Spy1273	-	phage protein
1269	 36.23	0	1262619..1263032	-	137	71903936	-	M28_Spy1274	-	DnaD-like protein
1270	 39.92	0	1263154..1263411	-	85	71903937	-	M28_Spy1275	-	phage replication protein
1271	 34.95	0	1263505..1263690	-	61	71903938	-	M28_Spy1276	-	phage protein
1272	 34.20	-1	1263719..1264063	-	114	71903939	-	M28_Spy1277	-	phage protein
1273	 40.78	0	1264222..1264476	-	84	71903940	-	M28_Spy1278	-	phage protein
1274	 40.00	0	1264662..1264811	-	49	71903941	-	M28_Spy1279	-	phage protein
1275	 38.55	0	1264844..1265572	-	242	71903942	-	M28_Spy1280	-	phage antirepressor protein
1276	 35.42	0	1265583..1265774	-	63	71903943	-	M28_Spy1281	-	phage protein
1277	 36.67	0	1266570..1266929	+	119	71903944	-	M28_Spy1282	-	Cro/CI family phage transcriptional regulator
1278	 35.17	0	1266943..1267323	+	126	71903945	-	M28_Spy1283	-	phage protein
1279	 30.08	-2	1267334..1267855	+	173	71903946	-	M28_Spy1284	-	phage protein
1280	 37.56	0	1267971..1269128	+	385	71903947	-	M28_Spy1285	-	DNA integration/recombination/invertion protein
1281	 41.46	0	1269239..1270345	-	368	71903948	msrA	M28_Spy1286	-	bifunctional methionine sulfoxide reductase A/B protein
1282	 39.10	0	1270388..1271011	-	207	71903949	tlpA	M28_Spy1287	-	thiol:disulfide interchange protein
1283	 38.68	0	1271024..1271734	-	236	71903950	ccdA	M28_Spy1288	-	cytochrome c-type biogenesis protein
1284	 39.12	0	1272140..1272433	-	97	71903951	-	M28_Spy1289	-	putative cytoplasmic protein
1285	 38.01	0	1272444..1273469	-	341	71903952	-	M28_Spy1290	-	hypothetical protein
1286	 39.70	0	1273466..1274140	-	224	71903953	-	M28_Spy1291	-	hypothetical protein
1287	 38.31	0	1274142..1275005	-	287	71903954	-	M28_Spy1292	-	putative cytoplasmic protein
1288	 35.28	0	1274995..1276890	-	631	71903955	-	M28_Spy1293	-	hypothetical protein
1289	 39.09	0	1276890..1277618	-	242	71903956	-	M28_Spy1294	-	hypothetical protein
1290	 35.87	0	1277751..1280159	-	802	71903957	-	M28_Spy1295	-	ATP-dependent RNA helicase
1291	 45.04	+1	1280313..1282961	-	882	71903958	valS	M28_Spy1296	-	valyl-tRNA synthetase
1292	 38.97	0	1282963..1283547	-	194	71903959	-	M28_Spy1297	-	hypothetical protein
1293	 48.89	+2	1283523..1283702	-	59	71903960	-	M28_Spy1298	-	ribosomal-protein-serine acetyltransferase
1294	 41.67	0	1284128..1284523	-	131	71903961	-	M28_Spy1299	-	putative cytoplasmic protein
1295	 35.69	0	1284544..1284882	-	112	71903962	-	M28_Spy1300	-	hypothetical protein
1296	 38.46	0	1284867..1284983	-	38	71903963	-	M28_Spy1301	-	hypothetical protein
1297	 38.15	0	1284967..1286109	-	380	71903964	-	M28_Spy1302	-	transposase
1298	 28.32	-2	1286437..1287573	-	378	71903965	-	M28_Spy1303	-	DNA integration/recombination/invertion protein
1299	 29.13	-2	1287623..1287955	-	110	71903966	-	M28_Spy1304	-	hypothetical protein
1300	 23.20	-2	1288122..1288664	-	180	71903967	-	M28_Spy1305	-	hypothetical protein
1301	 39.90	0	1288887..1289648	-	253	71903968	-	M28_Spy1306	-	putative cell surface protein
1302	 33.51	-1	1289673..1290230	-	185	71903969	-	M28_Spy1307	-	hypothetical protein
1303	 40.77	0	1290230..1291588	-	452	71903970	-	M28_Spy1308	-	hypothetical protein
1304	 37.50	0	1291723..1291866	+	47	71903971	-	M28_Spy1309	-	hypothetical protein
1305	 33.46	-1	1292034..1294349	-	771	71903972	-	M28_Spy1310	-	membrane protein
1306	 35.61	0	1294364..1296865	-	833	71903973	-	M28_Spy1311	-	DNA segregation ATPase related protein
1307	 32.36	-1	1296886..1297296	-	136	71903974	-	M28_Spy1312	-	hypothetical protein
1308	 35.56	0	1297299..1297568	-	89	71903975	-	M28_Spy1313	-	hypothetical protein
1309	 32.39	-1	1297587..1298537	-	316	71903976	-	M28_Spy1314	-	hypothetical protein
1310	 32.29	-1	1298538..1299017	-	159	71903977	-	M28_Spy1315	-	hypothetical protein
1311	 36.51	0	1299025..1299276	-	83	71903978	-	M28_Spy1316	-	hypothetical protein
1312	 33.81	-1	1299306..1299515	-	69	71903979	-	M28_Spy1317	-	hypothetical protein
1313	 34.07	-1	1299559..1299831	-	90	71903980	-	M28_Spy1318	-	hypothetical protein
1314	 34.03	-1	1300026..1300169	-	47	71903981	-	M28_Spy1319	-	Cro/CI family transcriptional regulator
1315	 28.31	-2	1300220..1300597	-	125	71903982	-	M28_Spy1320	-	hypothetical protein
1316	 31.16	-1	1300598..1301839	-	413	71903983	-	M28_Spy1321	-	Cro/CI family transcriptional regulator
1317	 32.34	-1	1302151..1303860	-	569	71903984	-	M28_Spy1322	-	FtsK/SpoIIIE family protein
1318	 34.43	0	1303880..1304335	-	151	71903985	-	M28_Spy1323	-	hypothetical protein
1319	 37.91	0	1304338..1304643	-	101	71903986	-	M28_Spy1324	-	hypothetical protein
1320	 41.93	0	1304905..1308963	-	1352	71903987	-	M28_Spy1325	-	putative cell surface protein
1321	 41.19	0	1309133..1311373	-	746	71903988	-	M28_Spy1326	-	putative cell surface protein
1322	 28.50	-2	1311466..1311858	-	130	71903989	-	M28_Spy1327	-	hypothetical protein
1323	 31.52	-1	1311982..1312422	-	146	71903990	-	M28_Spy1328	-	hypothetical protein
1324	 31.49	-1	1312580..1313014	-	144	71903991	-	M28_Spy1329	-	Cro/CI family transcriptional regulator
1325	 28.42	-2	1313889..1314275	+	128	71903992	-	M28_Spy1330	-	Cro/CI family transcriptional regulator
1326	 27.66	-2	1314282..1314704	+	140	71903993	-	M28_Spy1331	-	hypothetical protein
1327	 28.29	-2	1314769..1315125	-	118	71903994	-	M28_Spy1332	-	hypothetical protein
1328	 28.61	-2	1315128..1315466	-	112	71903995	-	M28_Spy1333	-	hypothetical protein
1329	 29.59	-2	1315463..1315756	-	97	71903996	-	M28_Spy1334	-	hypothetical protein
1330	 35.48	0	1315777..1315962	+	61	71903997	-	M28_Spy1335	-	transposase
1331	 40.57	0	1316468..1320961	-	1497	71903998	-	M28_Spy1336	-	R28 protein
38.26	MEAN

3.98	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.