IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS6180



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.26 STD DEV: 3.98
Streptococcus pyogenes MGAS6180, complete genome - 1..1897573
1894 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1147	 39.64	0	1159595..1160641	-	348	71903814	ddl	M28_Spy1152	-	D-alanyl-alanine synthetase A
1148	 41.04	0	1160742..1161338	-	198	71903815	recR	M28_Spy1153	-	recombination protein RecR
1149	 35.94	0	1161385..1161576	-	63	71903816	-	M28_Spy1154	-	penicillin-binding protein
1150	 37.64	0	1162136..1163017	-	293	71903817	-	M28_Spy1155	-	formate transporter
1151	 35.73	0	1163039..1163581	-	180	71903818	-	M28_Spy1156	-	hypothetical protein
1152	 34.87	0	1163742..1164263	-	173	71903819	-	M28_Spy1157	-	biotin repressor family transcriptional regulator
1153	 41.38	0	1164370..1165065	-	231	71903820	gpmA	M28_Spy1158	-	phosphoglyceromutase
1154	 41.56	0	1165292..1166239	+	315	71903821	pyrD	M28_Spy1159	-	dihydroorotate dehydrogenase 1A
1155	 29.89	-2	1166294..1166467	-	57	71903822	-	M28_Spy1160	-	hypothetical protein
1156	 40.42	0	1166539..1168401	-	620	71903823	-	M28_Spy1161	-	lead, cadmium, zinc and mercury transporting ATPase
1157	 40.58	0	1168755..1169030	-	91	71903824	-	M28_Spy1162	-	DNA-binding protein HU
1158	 32.14	-1	1169129..1169716	-	195	71903825	-	M28_Spy1163	-	hypothetical protein
1159	 32.87	-1	1169694..1170554	-	286	71903826	-	M28_Spy1164	-	lipase/acylhydrolase
1160	 37.91	0	1170529..1171380	-	283	71903827	-	M28_Spy1165	-	DegV family protein
1161	 36.52	0	1171596..1172537	-	313	71903828	-	M28_Spy1166	-	hypothetical protein
1162	 39.52	0	1172709..1174373	-	554	71903829	recN	M28_Spy1167	-	DNA repair protein
1163	 35.12	0	1174392..1174895	-	167	71903830	argR1	M28_Spy1168	-	arginine repressor
1164	 42.75	+1	1174849..1175676	-	275	71903831	-	M28_Spy1169	-	hemolysin
1165	 41.01	0	1175669..1176541	-	290	71903832	fps	M28_Spy1170	-	dimethylallyltransferase
1166	 34.72	0	1176541..1176756	-	71	71903833	xseB	M28_Spy1171	-	exodeoxyribonuclease VII small subunit
1167	 42.40	+1	1176734..1178089	-	451	71903834	xseA	M28_Spy1172	-	exodeoxyribonuclease VII large subunit
1168	 39.95	0	1178227..1179087	-	286	71903835	folD	M28_Spy1173	-	methenyltetrahydrofolate cyclohydrolase
1169	 37.73	0	1179289..1180992	-	567	71903836	-	M28_Spy1174	-	phosphoglucomutase
1170	 37.38	0	1181161..1182594	-	477	71903837	phr	M28_Spy1175	-	deoxyribodipyrimidine photolyase
1171	 40.79	0	1182719..1183456	-	245	71903838	artP	M28_Spy1176	-	arginine transport ATP-binding protein
1172	 39.74	0	1183453..1184139	-	228	71903839	artQ	M28_Spy1177	-	arginine transport system permease protein
1173	 38.53	0	1184266..1184496	-	76	71903840	-	M28_Spy1178	-	putative cytoplasmic protein
1174	 40.91	0	1184794..1187076	+	760	71903841	clpE	M28_Spy1179	-	ATP-dependent Clp protease ATP-binding subunit
1175	 39.25	0	1187204..1187659	+	151	71903842	mutT	M28_Spy1180	-	mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)
1176	 33.66	-1	1187710..1188012	+	100	71903843	-	M28_Spy1181	-	putative cytoplasmic protein
1177	 41.76	0	1188277..1191078	-	933	71903844	ileS	M28_Spy1182	-	isoleucyl-tRNA synthetase
1178	 36.89	0	1191351..1192109	-	252	71903845	divIVAS	M28_Spy1183	-	cell division initiation protein DivIVA
1179	 31.44	-1	1192119..1192910	-	263	71903846	-	M28_Spy1184	-	RNA binding protein
1180	 30.98	-1	1192910..1193164	-	84	71903847	-	M28_Spy1185	-	integral membrane protein
1181	 37.82	0	1193169..1193837	-	222	71903848	-	M28_Spy1186	-	putative cytoplasmic protein
1182	 33.93	-1	1193837..1194508	-	223	71903849	-	M28_Spy1187	-	pyridoxal-5'-phosphate family protein
1183	 42.35	+1	1194511..1195830	-	439	71903850	ftsZ	M28_Spy1188	-	cell division protein FtsZ
1184	 39.19	0	1195854..1197218	-	454	71903851	ftsA	M28_Spy1189	-	cell division protein
1185	 38.21	0	1197430..1198578	-	382	71903852	divIB	M28_Spy1190	-	cell division protein
1186	 41.21	0	1198579..1199682	-	367	71903853	murG	M28_Spy1191	-	N-acetylglucosaminyl transferase
1187	 40.62	0	1199661..1201019	-	452	71903854	murD	M28_Spy1192	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
1188	 37.30	0	1201375..1201626	-	83	71903855	-	M28_Spy1193	-	hypothetical protein
1189	 41.64	0	1201748..1203589	-	613	71903856	typA	M28_Spy1194	-	GTP-binding protein TypA/BipA
1190	 38.97	0	1203772..1204161	-	129	71903857	-	M28_Spy1195	-	rhodanese-related sulfurtransferase
1191	 43.52	+1	1204171..1205142	-	323	71903858	glcK	M28_Spy1196	-	glucokinase
1192	 33.78	-1	1205147..1205368	-	73	71903859	-	M28_Spy1197	-	putative cytoplasmic protein
1193	 40.15	0	1205492..1206019	-	175	71903860	dpr	M28_Spy1198	-	ferroxidase
1194	 33.33	-1	1206247..1206873	+	208	71903861	-	M28_Spy1199	-	prepilin peptidase family protein
1195	 37.59	0	1206955..1208034	-	359	71903862	-	M28_Spy1200	-	radical SAM protein
1196	 33.64	-1	1208038..1208682	-	214	71903863	-	M28_Spy1201	-	transcriptional regulator
1197	 30.89	-1	1208953..1209075	-	40	71903864	-	M28_Spy1202	-	hypothetical protein
1198	 37.43	0	1209106..1210131	-	341	71903865	-	M28_Spy1203	-	ribose operon repressor
1199	 38.15	0	1210498..1211535	-	345	71903866	-	M28_Spy1204	-	ATP-dependent protease La
1200	 34.96	0	1211522..1212013	-	163	71903867	coaD	M28_Spy1205	-	phosphopantetheine adenylyltransferase
1201	 37.96	0	1212003..1212542	-	179	71903868	-	M28_Spy1206	-	methyltransferase
1202	 40.89	0	1212665..1213657	-	330	71903869	asnA	M28_Spy1207	-	asparagine synthetase AsnA
1203	 42.38	+1	1213970..1214920	-	316	71903870	arcC	M28_Spy1208	-	carbamate kinase
1204	 41.59	0	1214940..1216271	-	443	71903871	-	M28_Spy1209	-	hypothetical protein
1205	 40.43	0	1216288..1217781	-	497	71903872	-	M28_Spy1210	-	arginine/ornithine antiporter
1206	 41.81	0	1217951..1218964	-	337	71903873	arcB	M28_Spy1211	-	ornithine carbamoyltransferase
1207	 39.16	0	1219004..1219432	-	142	71903874	-	M28_Spy1212	-	acetyltransferase
1208	 40.21	0	1219532..1220767	-	411	71903875	arcA	M28_Spy1213	-	arginine deiminase
1209	 35.68	0	1221041..1221721	-	226	71903876	-	M28_Spy1214	-	Crp family transcriptional regulator
1210	 40.93	0	1221863..1222336	+	157	71903877	ahrC.2	M28_Spy1215	-	arginine repressor
1211	 42.12	0	1222502..1223218	-	238	71903878	-	M28_Spy1216	-	hypothetical protein
1212	 40.31	0	1223222..1224310	-	362	71903879	-	M28_Spy1217	-	putative cytoplasmic protein
1213	 43.14	+1	1224383..1226116	-	577	71903880	-	M28_Spy1218	-	two-component sensor kinase
1214	 40.49	0	1226113..1226853	-	246	71903881	-	M28_Spy1219	-	two-component response regulator
1215	 43.17	+1	1227098..1227280	-	60	71903882	-	M28_Spy1220	-	phage protein
1216	 27.78	-2	1227345..1227632	-	95	71903883	-	M28_Spy1221	-	hypothetical protein
1217	 35.24	0	1227626..1228201	-	191	71903884	slaA	M28_Spy1222	-	streptococcal phospholipase A2
1218	 28.81	-2	1228677..1229471	-	264	71903885	speK	M28_Spy1223	-	exotoxin type K precursor
1219	 32.53	-1	1229760..1230626	-	288	71903886	-	M28_Spy1224	-	phage protein
1220	 34.48	0	1230614..1231138	-	174	71903887	-	M28_Spy1225	-	phage protein
1221	 44.22	+1	1231278..1232480	-	400	71903888	-	M28_Spy1226	-	phage-associated cell wall hydrolase
1222	 38.17	0	1232591..1232776	-	61	71903889	-	M28_Spy1227	-	phage protein
1223	 39.06	0	1232773..1233069	-	98	71903890	-	M28_Spy1228	-	phage protein
1224	 41.18	0	1233080..1233691	-	203	71903891	-	M28_Spy1229	-	phage protein
1225	 36.81	0	1233694..1234125	-	143	71903892	-	M28_Spy1230	-	phage protein
1226	 43.14	+1	1234137..1236023	-	628	71903893	-	M28_Spy1231	-	phage protein
1227	 27.88	-2	1236034..1236363	-	109	71903894	-	M28_Spy1232	-	phage protein
1228	 40.74	0	1236350..1237564	-	404	71903895	-	M28_Spy1233	-	hyaluronoglucosaminidase
1229	 41.01	0	1237561..1239708	-	715	71903896	-	M28_Spy1234	-	phage endopeptidase
1230	 39.33	0	1239705..1240421	-	238	71903897	-	M28_Spy1235	-	phage protein
1231	 43.11	+1	1240418..1243699	-	1093	71903898	-	M28_Spy1236	-	phage protein
1232	 37.80	0	1243668..1244249	-	193	71903899	-	M28_Spy1237	-	phage protein
1233	 39.54	0	1244253..1244687	-	144	71903900	-	M28_Spy1238	-	phage protein
1234	 42.80	+1	1244726..1245211	-	161	71903901	-	M28_Spy1239	-	major tail shaft protein
1235	 36.34	0	1245211..1245609	-	132	71903902	-	M28_Spy1240	-	minor capsid protein
1236	 43.98	+1	1245606..1245962	-	118	71903903	-	M28_Spy1241	-	minor capsid protein
1237	 38.89	0	1245962..1246321	-	119	71903904	-	M28_Spy1242	-	minor capsid protein
1238	 39.09	0	1246284..1246700	-	138	71903905	-	M28_Spy1243	-	phage protein
1239	 43.83	+1	1246754..1247572	-	272	71903906	-	M28_Spy1244	-	major head protein
1240	 40.16	0	1247576..1248190	-	204	71903907	-	M28_Spy1245	-	phage protein
1241	 35.58	0	1248316..1248582	-	88	71903908	-	M28_Spy1246	-	phage protein
1242	 32.92	-1	1248644..1248883	-	79	71903909	-	M28_Spy1247	-	phage protein
1243	 40.09	0	1248855..1250333	-	492	71903910	-	M28_Spy1248	-	minor capsid protein
1244	 40.66	0	1250338..1251948	-	536	71903911	-	M28_Spy1249	-	minor capsid protein
1245	 41.09	0	1251854..1253065	-	403	71903912	-	M28_Spy1250	-	terminase large subunit
1246	 38.83	0	1253148..1253675	-	175	71903913	-	M28_Spy1251	-	phage protein
38.26	MEAN

3.98	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.