IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.60 STD DEV: 3.72
Streptococcus pyogenes MGAS315, complete genome - 1..1900521
1865 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
603	 34.50	-1	662970..663140	+	56	21910139	-	SpyM3_0603	-	hypothetical protein
604	 38.70	0	663270..664499	+	409	21910140	clpX	SpyM3_0604	-	ATP-dependent protease ATP-binding subunit
605	 38.67	0	664509..665108	+	199	21910141	-	SpyM3_0605	-	GTPase EngB
606	 34.14	-1	665256..666002	+	248	21910142	-	SpyM3_0606	-	hypothetical protein
607	 38.48	0	666055..668154	-	699	21910143	clpL	SpyM3_0607	-	putative ATP-dependent Clp proteinase (ATP-binding subunit)
608	 42.84	+1	668534..669217	+	227	21910144	rpiA	SpyM3_0608	-	ribose-5-phosphate isomerase A
609	 42.49	+1	669294..670505	+	403	21910145	deoB	SpyM3_0609	-	phosphopentomutase
610	 41.04	0	670524..670964	+	146	21910146	arsC	SpyM3_0610	-	putative arsenate reductase
611	 41.36	0	670948..671757	+	269	21910147	punA	SpyM3_0611	-	purine nucleoside phosphorylase
612	 43.56	+1	672528..673133	+	201	21910148	deoD2	SpyM3_0612	-	putative purine nucleoside phosphorylase
613	 39.60	0	673261..673914	+	217	21910149	-	SpyM3_0613	-	putative histidine protein kinase
614	 40.20	0	673994..674779	-	261	21910150	cpsY	SpyM3_0614	-	putative transcriptional regulator
615	 36.50	0	675121..675657	+	178	21910151	-	SpyM3_0615	-	hypothetical protein
616	 41.99	0	675934..676626	+	230	21910152	pyrF	SpyM3_0616	-	orotidine 5'-phosphate decarboxylase
617	 39.52	0	676684..677313	+	209	21910153	pyrE	SpyM3_0617	-	orotate phosphoribosyltransferase
618	 42.27	0	677510..678964	+	484	21910154	amiC	SpyM3_0618	-	amidase
619	 37.62	0	679082..679945	+	287	21910155	-	SpyM3_0619	-	putative ABC transporter (binding protein)
620	 39.32	0	679974..680624	+	216	21910156	-	SpyM3_0620	-	putative ABC transporter (permease)
621	 42.81	+1	680757..681410	+	217	21910157	ung	SpyM3_0621	-	uracil-DNA glycosylase
622	 40.98	0	681542..682810	+	422	21910158	pyrC	SpyM3_0622	-	dihydroorotase
623	 32.78	-1	682868..683590	-	240	21910159	-	SpyM3_0623	-	putative glycerol-3-phosphate acyltransferase PlsY
624	 41.73	0	683641..685593	+	650	21910160	parE	SpyM3_0624	-	DNA topoisomerase IV subunit B
625	 40.24	0	685684..688143	+	819	161485747	parC	SpyM3_0625	-	DNA topoisomerase IV subunit A
626	 40.74	0	688263..689288	+	341	21910162	bcaT	SpyM3_0626	-	branched-chain amino acid aminotransferase
627	 31.17	-1	689352..689582	+	76	21910163	-	SpyM3_0627	-	hypothetical protein
628	 41.29	0	689994..691199	+	401	21910164	rpsA	SpyM3_0628	-	30S ribosomal protein S1
629	 33.00	-1	691746..692048	-	100	21910165	-	SpyM3_0629	-	hypothetical protein
630	 38.10	0	692249..693235	+	328	21910166	-	SpyM3_0630	-	hypothetical protein
631	 40.57	0	693546..693932	+	128	21910167	-	SpyM3_0631	-	hypothetical protein
632	 39.49	0	693991..694899	+	302	21910168	-	SpyM3_0632	-	putative exfoliative toxin
633	 41.81	0	695017..695193	-	58	21910169	-	SpyM3_0633	-	hypothetical protein
634	 43.00	+1	695327..696226	+	299	21910170	miaA	SpyM3_0634	-	tRNA delta(2)-isopentenylpyrophosphate transferase
635	 39.55	0	696380..697537	+	385	21910171	hflX	SpyM3_0635	-	putative GTP-binding protein
636	 38.21	0	697530..698165	+	211	21910172	-	SpyM3_0636	-	hypothetical protein
637	 40.54	0	698180..699109	+	309	21910173	-	SpyM3_0637	-	ribonuclease Z
638	 42.09	0	699109..699873	+	254	21910174	-	SpyM3_0638	-	oxidoreductase
639	 42.15	0	699870..702080	+	736	21910175	recJ	SpyM3_0639	-	putative single-strand DNA-specific exonuclease
640	 39.11	0	702230..702748	+	172	21910176	apt	SpyM3_0640	-	adenine phosphoribosyltransferase
641	 35.53	0	702829..703512	+	227	21910177	-	SpyM3_0641	-	hypothetical protein
642	 39.57	0	703509..704165	+	218	21910178	nth	SpyM3_0642	-	putative endonuclease III (DNA repair)
643	 42.36	+1	704237..704923	+	228	21910179	-	SpyM3_0643	-	hypothetical protein
644	 40.43	0	704913..705701	+	262	21910180	-	SpyM3_0644	-	hypothetical protein
645	 40.20	0	705741..706847	+	368	21910181	-	SpyM3_0645	-	putative oxidoreductase
646	 42.07	0	706905..707774	+	289	21910182	rmlA	SpyM3_0646	-	glucose-1-phosphate thymidyl transferase
647	 40.07	0	707774..708367	+	197	21910183	rmlC	SpyM3_0647	-	dTDP-4-dehydrorhamnose 3,5-epimerase
648	 40.15	0	708611..709651	+	346	21910184	rmlB	SpyM3_0648	-	dTDP-glucose 4,6-dehydratase
649	 39.62	0	709872..710348	+	158	21910185	mutX	SpyM3_0649	-	putative dGTP pyrophosphohydrolase
650	 38.32	0	710406..711587	+	393	21910186	-	SpyM3_0650	-	hypothetical protein
651	 39.42	0	711577..712824	+	415	21910187	-	SpyM3_0651	-	hypothetical protein
652	 40.05	0	712883..714535	-	550	21910188	-	SpyM3_0652	-	putative fibronectin-binding protein-like protein A
653	 38.34	0	714889..715887	+	332	21910189	-	SpyM3_0653	-	putative ABC transporter substrate-binding protein
654	 31.05	-2	715838..716056	+	72	21910190	-	SpyM3_0654	-	hypothetical protein
655	 36.21	0	716232..717101	+	289	21910191	-	SpyM3_0655	-	putative ABC transporter membrane-spanning permease
656	 37.55	0	717098..717856	+	252	21910192	-	SpyM3_0656	-	ABC transporter ATP-binding protein
657	 38.57	0	718060..719721	+	553	21910193	-	SpyM3_0657	-	Zn-dependent hydrolase
658	 41.09	0	719854..720639	+	261	21910194	estA	SpyM3_0658	-	putative tributyrin esterase
659	 35.47	0	720669..720995	+	108	21910195	-	SpyM3_0659	-	hypothetical protein
660	 40.88	0	721041..722948	+	635	21910196	-	SpyM3_0660	-	ABC transporter ATP-binding protein
661	 41.59	0	723233..724201	+	322	21910197	acoA	SpyM3_0661	-	putative acetoin dehydrogenase (TPP-dependent) alpha chain
662	 42.42	+1	724257..725258	+	333	21910198	acoB	SpyM3_0662	-	putative acetoin dehydrogenase (TPP-dependent) beta chain
663	 42.77	+1	725443..726852	+	469	21910199	acoC	SpyM3_0663	-	branched-chain alpha-keto acid dehydrogenase subunit E2
664	 41.50	0	727183..728946	+	587	21910200	acoL	SpyM3_0664	-	putative dihydrolipoamide dehydrogenase component E3
665	 35.93	0	729429..731852	-	807	21910201	hylA	SpyM3_0665	-	extracellular hyaluronate lyase
666	 37.47	0	732085..733074	+	329	21910202	-	SpyM3_0666	-	putative lipoate-protein ligase
667	 36.62	0	733183..733974	-	263	21910203	cobQ	SpyM3_0667	-	putative cobyric acid synthase
668	 37.97	0	733974..735311	-	445	21910204	murC	SpyM3_0668	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
669	 37.09	0	735424..736275	+	283	21910205	-	SpyM3_0669	-	hypothetical protein
670	 36.26	0	736272..737228	+	318	21910206	-	SpyM3_0670	-	hypothetical protein
671	 42.07	0	737447..738637	+	396	21910207	-	SpyM3_0671	-	putative phospho-sugar mutase
672	 39.41	0	738761..739402	+	213	21910208	-	SpyM3_0672	-	hypothetical protein
673	 37.82	0	739369..740595	+	408	21910209	hemN	SpyM3_0673	-	coproporphyrinogen III oxidase
674	 36.25	0	740605..741357	+	250	21910210	-	SpyM3_0674	-	putative acyl-ACP thioesterase
675	 43.66	+1	741357..742121	+	254	21910211	-	SpyM3_0675	-	hypothetical protein
676	 37.91	0	742121..742753	+	210	21910212	-	SpyM3_0676	-	hypothetical protein
677	 35.21	0	743040..747146	+	1368	21910213	-	SpyM3_0677	-	hypothetical protein
678	 35.63	0	747146..748015	+	289	21910214	-	SpyM3_0678	-	hypothetical protein
679	 34.56	-1	748027..748353	+	108	21910215	-	SpyM3_0679	-	hypothetical protein
680	 29.71	-2	748343..749005	+	220	21910216	-	SpyM3_0680	-	hypothetical protein
681	 35.42	0	749213..750409	-	398	21910217	-	SpyM3_0681	-	putative integrase - phage associated
682	 36.71	0	750720..751460	-	246	21910218	-	SpyM3_0682	-	hypothetical protein
683	 33.59	-1	751471..751863	-	130	21910219	-	SpyM3_0683	-	hypothetical protein
684	 30.51	-2	751867..752256	-	129	21910220	-	SpyM3_0684	-	putative repressor - phage associated
685	 35.87	0	752506..752781	+	91	21910221	-	SpyM3_0685	-	hypothetical protein
686	 37.09	0	752816..753028	+	70	21910222	-	SpyM3_0686	-	hypothetical protein
687	 38.06	0	753907..754626	+	239	21910223	-	SpyM3_0687	-	putative antirepressor - phage associated
688	 31.40	-1	754700..754957	+	85	21910224	-	SpyM3_0688	-	hypothetical protein
689	 31.77	-1	755050..755241	+	63	21910225	-	SpyM3_0689	-	hypothetical protein
690	 40.04	0	755537..756877	+	446	21910226	-	SpyM3_0690	-	putative DNA polymerase III delta prime subunit - phage associated
691	 35.43	0	756870..757631	+	253	21910227	-	SpyM3_0691	-	hypothetical protein
692	 46.23	+2	757940..758443	+	167	21910228	-	SpyM3_0692	-	hypothetical protein
693	 37.72	0	758443..758670	+	75	21910229	-	SpyM3_0693	-	hypothetical protein
694	 30.92	-2	758684..758890	+	68	21910230	-	SpyM3_0694	-	hypothetical protein
695	 38.39	0	758907..759341	+	144	21910231	-	SpyM3_0695	-	hypothetical protein
696	 40.00	0	759338..759622	+	94	21910232	-	SpyM3_0696	-	hypothetical protein
697	 36.97	0	759624..760256	+	210	21910233	-	SpyM3_0697	-	hypothetical protein
698	 33.53	-1	760261..760773	+	170	21910234	-	SpyM3_0698	-	hypothetical protein
699	 41.94	0	760739..760924	+	61	21910235	-	SpyM3_0699	-	putative single strand binding protein - phage associated
700	 40.07	0	760939..761220	+	93	21910236	-	SpyM3_0700	-	hypothetical protein
701	 35.40	0	761217..761555	+	112	21910237	-	SpyM3_0701	-	putaive immunity repressor protein - phage associated
702	 37.68	0	761557..762384	+	275	21910238	-	SpyM3_0702	-	hypothetical protein
38.60	MEAN

3.72	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.